RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 CYP4F11Q9HBI6 524 aa7.63□□□□□ -1.19
SMCO1-201ENST00000397537 COMMD8Q9NX08 183 aa7.63□□□□□ -1.19
SMCO1-201ENST00000397537 COQ6Q9Y2Z9 468 aa7.63□□□□□ -1.19
SMCO1-201ENST00000397537 PCDHA8Q9Y5H6 950 aa7.63□□□□□ -1.19
SMCO1-201ENST00000397537 IKBKGQ9Y6K9 419 aa7.63□□□□□ -1.19
SMCO1-201ENST00000397537 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.62□□□□□ -1.19
SMCO1-201ENST00000397537 GOLGA8AA7E2F4 631 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 GOLGA8BA8MQT2 603 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 DDX3XO00571 662 aaKnown RBP eCLIP7.62□□□□□ -1.19
SMCO1-201ENST00000397537 IRAK2O43187 625 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 URI1O94763 535 aaPredicted RBP7.62□□□□□ -1.19
SMCO1-201ENST00000397537 XBP1P17861 261 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 PLCG1P19174 1290 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 ATP4AP20648 1035 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 TNNT2P45379 298 aaPredicted RBP7.62□□□□□ -1.19
SMCO1-201ENST00000397537 NOP2P46087 812 aaKnown RBP7.62□□□□□ -1.19
SMCO1-201ENST00000397537 HAUS3Q68CZ6 603 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 THSD4Q6ZMP0 1018 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 USP45Q70EL2 814 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 BTN2A1Q7KYR7 527 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 DNAJB7Q7Z6W7 309 aaPredicted RBP7.62□□□□□ -1.19
SMCO1-201ENST00000397537 CPOQ8IVL8 374 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 ATG16L2Q8NAA4 619 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 HTRA1Q92743 480 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 ERCC4Q92889 916 aaPredicted RBP7.62□□□□□ -1.19
SMCO1-201ENST00000397537 CNTD2Q9H8S5 307 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 C11orf16Q9NQ32 467 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 PIH1D1Q9NWS0 290 aaKnown RBP7.62□□□□□ -1.19
SMCO1-201ENST00000397537 KLHL3Q9UH77 587 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 DENND2AQ9ULE3 1009 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 PADI4Q9UM07 663 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 RRP7AQ9Y3A4 280 aaKnown RBP7.62□□□□□ -1.19
SMCO1-201ENST00000397537 DAGLAQ9Y4D2 1042 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 PCDHA11Q9Y5I1 949 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 TLL2Q9Y6L7 1015 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 NUP153P49790 1475 aaKnown RBP7.62□□□□□ -1.19
SMCO1-201ENST00000397537 MLH3Q9UHC1 1453 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 ROBO1Q9Y6N7 1651 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 CAPN8A6NHC0 703 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 CHURC1-FNTBB4DL54 471 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 SKAP2O75563 359 aaPredicted RBP7.62□□□□□ -1.19
SMCO1-201ENST00000397537 B3GALNT1O75752 331 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 TGDSO95455 350 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 ADRB2P07550 413 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 PARP1P09874 1014 aaKnown RBP7.62□□□□□ -1.19
SMCO1-201ENST00000397537 YBX3P16989 372 aaKnown RBP eCLIP7.62□□□□□ -1.19
SMCO1-201ENST00000397537 PDCP20941 246 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 ITGA8P53708 1063 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 MRPS35P82673 323 aaKnown RBP7.62□□□□□ -1.19
SMCO1-201ENST00000397537 GUCY1A3Q02108 690 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 IFT88Q13099 833 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 PMS2P11Q13670 270 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 PLCL1Q15111 1095 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 FAM110CQ1W6H9 321 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 ANO6Q4KMQ2 910 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 WIPI1Q5MNZ9 446 aaPredicted RBP7.62□□□□□ -1.19
SMCO1-201ENST00000397537 MEX3CQ5U5Q3 659 aaKnown RBP7.62□□□□□ -1.19
SMCO1-201ENST00000397537 RPUSD3Q6P087 351 aaKnown RBP7.62□□□□□ -1.19
SMCO1-201ENST00000397537 KRT25Q7Z3Z0 450 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 LIX1LQ8IVB5 337 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 MS4A5Q9H3V2 200 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 ZWILCHQ9H900 591 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 CABP5Q9NP86 173 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.62□□□□□ -1.19
SMCO1-201ENST00000397537 TLR7Q9NYK1 1049 aaKnown RBP7.62□□□□□ -1.19
SMCO1-201ENST00000397537 SRPK3Q9UPE1 567 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 SMC3Q9UQE7 1217 aa7.62□□□□□ -1.19
SMCO1-201ENST00000397537 XIRP1Q702N8 1843 aaKnown RBP7.61□□□□□ -1.19
SMCO1-201ENST00000397537 RGS12O14924 1447 aa7.61□□□□□ -1.19
SMCO1-201ENST00000397537 MGEA5O60502 916 aa7.61□□□□□ -1.19
SMCO1-201ENST00000397537 MT-ND3P03897 115 aa7.61□□□□□ -1.19
SMCO1-201ENST00000397537 TSHRP16473 764 aa7.61□□□□□ -1.19
SMCO1-201ENST00000397537 TATP17735 454 aaPredicted RBP7.61□□□□□ -1.19
SMCO1-201ENST00000397537 HTR1BP28222 390 aa7.61□□□□□ -1.19
SMCO1-201ENST00000397537 MECP2P51608 486 aaKnown RBP7.61□□□□□ -1.19
SMCO1-201ENST00000397537 GFRA1P56159 465 aa7.61□□□□□ -1.19
SMCO1-201ENST00000397537 ALDH6A1Q02252 535 aaKnown RBP7.61□□□□□ -1.19
SMCO1-201ENST00000397537 PDE3AQ14432 1141 aa7.61□□□□□ -1.19
SMCO1-201ENST00000397537 BECN1Q14457 450 aa7.61□□□□□ -1.19
SMCO1-201ENST00000397537 INPP5AQ14642 412 aa7.61□□□□□ -1.19
SMCO1-201ENST00000397537 SLMAPQ14BN4 828 aa7.61□□□□□ -1.19
SMCO1-201ENST00000397537 SMAD1Q15797 465 aaKnown RBP7.61□□□□□ -1.19
SMCO1-201ENST00000397537 PFKFB4Q16877 469 aa7.61□□□□□ -1.19
SMCO1-201ENST00000397537 ZNF362Q5T0B9 420 aaPredicted RBP7.61□□□□□ -1.19
SMCO1-201ENST00000397537 TAF3Q5VWG9 929 aa7.61□□□□□ -1.19
SMCO1-201ENST00000397537 KAZNQ674X7 775 aa7.61□□□□□ -1.19
SMCO1-201ENST00000397537 PDZD3Q86UT5 571 aa7.61□□□□□ -1.19
SMCO1-201ENST00000397537 EPHX4Q8IUS5 362 aa7.61□□□□□ -1.19
SMCO1-201ENST00000397537 PRR18Q8N4B5 295 aa7.61□□□□□ -1.19
SMCO1-201ENST00000397537 TGFBRAP1Q8WUH2 860 aa7.61□□□□□ -1.19
SMCO1-201ENST00000397537 RSAD2Q8WXG1 361 aa7.61□□□□□ -1.19
SMCO1-201ENST00000397537 C1orf159Q96HA4 380 aa7.61□□□□□ -1.19
SMCO1-201ENST00000397537 MAELQ96JY0 434 aaKnown RBP7.61□□□□□ -1.19
SMCO1-201ENST00000397537 TSGA13Q96PP4 275 aa7.61□□□□□ -1.19
SMCO1-201ENST00000397537 PNMA5Q96PV4 448 aa7.61□□□□□ -1.19
SMCO1-201ENST00000397537 GAS2L1Q99501 681 aaPredicted RBP7.61□□□□□ -1.19
SMCO1-201ENST00000397537 VPS33BQ9H267 617 aa7.61□□□□□ -1.19
SMCO1-201ENST00000397537 JMJD4Q9H9V9 463 aa7.61□□□□□ -1.19
SMCO1-201ENST00000397537 GRPEL1Q9HAV7 217 aa7.61□□□□□ -1.19
SMCO1-201ENST00000397537 TRPV4Q9HBA0 871 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms