RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 ERVK-9P63128 1117 aa17.47■□□□□ 0.39
PCDH1-203ENST00000394536 SNCBQ16143 134 aa17.47■□□□□ 0.39
PCDH1-203ENST00000394536 TAOK1Q7L7X3 1001 aa17.47■□□□□ 0.39
PCDH1-203ENST00000394536 TAB3Q8N5C8 712 aaPredicted RBP17.47■□□□□ 0.39
PCDH1-203ENST00000394536 THOC1Q96FV9 657 aaKnown RBP17.47■□□□□ 0.39
PCDH1-203ENST00000394536 MTMR9Q96QG7 549 aa17.47■□□□□ 0.39
PCDH1-203ENST00000394536 EIF2AK1Q9BQI3 630 aaKnown RBP17.47■□□□□ 0.39
PCDH1-203ENST00000394536 PLCB1Q9NQ66 1216 aa17.47■□□□□ 0.39
PCDH1-203ENST00000394536 PPP1R1BQ9UD71 204 aaPredicted RBP17.47■□□□□ 0.39
PCDH1-203ENST00000394536 ARFGEF2Q9Y6D5 1785 aa17.47■□□□□ 0.39
PCDH1-203ENST00000394536 ESYT2A0FGR8 921 aa17.47■□□□□ 0.39
PCDH1-203ENST00000394536 FTLP02792 175 aaPredicted RBP17.47■□□□□ 0.39
PCDH1-203ENST00000394536 POLR2MP0CAP2 368 aa17.47■□□□□ 0.39
PCDH1-203ENST00000394536 ADCY8P40145 1251 aa17.47■□□□□ 0.39
PCDH1-203ENST00000394536 MEI1Q5TIA1 1274 aa17.47■□□□□ 0.39
PCDH1-203ENST00000394536 RIOX1Q9H6W3 641 aa17.47■□□□□ 0.39
PCDH1-203ENST00000394536 PON1P27169 355 aa17.46■□□□□ 0.39
PCDH1-203ENST00000394536 NFIAQ12857 509 aa17.46■□□□□ 0.39
PCDH1-203ENST00000394536 SYDE2Q5VT97 1194 aa17.46■□□□□ 0.39
PCDH1-203ENST00000394536 PRR5LQ6MZQ0 368 aa17.46■□□□□ 0.39
PCDH1-203ENST00000394536 FRMD5Q7Z6J6 570 aa17.46■□□□□ 0.39
PCDH1-203ENST00000394536 OGFOD1Q8N543 542 aa17.46■□□□□ 0.39
PCDH1-203ENST00000394536 ZNF653Q96CK0 615 aa17.46■□□□□ 0.39
PCDH1-203ENST00000394536 CSRNP1Q96S65 589 aa17.46■□□□□ 0.39
PCDH1-203ENST00000394536 CASP5P51878 434 aa17.46■□□□□ 0.39
PCDH1-203ENST00000394536 KCNA1Q09470 495 aa17.46■□□□□ 0.39
PCDH1-203ENST00000394536 PPP4R3AQ6IN85 833 aa17.46■□□□□ 0.39
PCDH1-203ENST00000394536 CCDC63Q8NA47 563 aa17.46■□□□□ 0.39
PCDH1-203ENST00000394536 CYP2W1Q8TAV3 490 aa17.46■□□□□ 0.39
PCDH1-203ENST00000394536 TCHPQ9BT92 498 aa17.46■□□□□ 0.39
PCDH1-203ENST00000394536 ISCUQ9H1K1 167 aa17.46■□□□□ 0.39
PCDH1-203ENST00000394536 AZI2Q9H6S1 392 aa17.46■□□□□ 0.39
PCDH1-203ENST00000394536 ARHGEF10LQ9HCE6 1279 aa17.46■□□□□ 0.39
PCDH1-203ENST00000394536 NID2Q14112 1375 aa17.46■□□□□ 0.39
PCDH1-203ENST00000394536 RASGRF2O14827 1237 aa17.46■□□□□ 0.39
PCDH1-203ENST00000394536 STX2P32856 288 aa17.46■□□□□ 0.39
PCDH1-203ENST00000394536 TRAF1Q13077 416 aa17.46■□□□□ 0.39
PCDH1-203ENST00000394536 FAM102BQ5T8I3 360 aa17.46■□□□□ 0.39
PCDH1-203ENST00000394536 BANK1Q8NDB2 785 aa17.46■□□□□ 0.39
PCDH1-203ENST00000394536 GDAP1Q8TB36 358 aa17.46■□□□□ 0.39
PCDH1-203ENST00000394536 CYFIP2Q96F07 1278 aa17.46■□□□□ 0.39
PCDH1-203ENST00000394536 PI4KBQ9UBF8 816 aa17.46■□□□□ 0.39
PCDH1-203ENST00000394536 TLR2O60603 784 aa17.45■□□□□ 0.38
PCDH1-203ENST00000394536 TPCN2Q8NHX9 752 aa17.45■□□□□ 0.38
PCDH1-203ENST00000394536 HOMER3Q9NSC5 361 aa17.45■□□□□ 0.38
PCDH1-203ENST00000394536 MYH10P35580 1976 aa17.45■□□□□ 0.38
PCDH1-203ENST00000394536 CRYBG1Q9Y4K1 1723 aa17.45■□□□□ 0.38
PCDH1-203ENST00000394536 KCNJ1P48048 391 aa17.45■□□□□ 0.38
PCDH1-203ENST00000394536 NT5C2P49902 561 aa17.45■□□□□ 0.38
PCDH1-203ENST00000394536 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.45■□□□□ 0.38
PCDH1-203ENST00000394536 PDXKO00764 312 aa17.45■□□□□ 0.38
PCDH1-203ENST00000394536 FGFR4P22455 802 aa17.45■□□□□ 0.38
PCDH1-203ENST00000394536 CYP4F22Q6NT55 531 aa17.45■□□□□ 0.38
PCDH1-203ENST00000394536 FMNL3Q8IVF7 1028 aa17.45■□□□□ 0.38
PCDH1-203ENST00000394536 MSL3Q8N5Y2 521 aaKnown RBP17.45■□□□□ 0.38
PCDH1-203ENST00000394536 KCPQ6ZWJ8 1503 aa17.45■□□□□ 0.38
PCDH1-203ENST00000394536 THAP12O43422 761 aa17.44■□□□□ 0.38
PCDH1-203ENST00000394536 IFNB1P01574 187 aa17.44■□□□□ 0.38
PCDH1-203ENST00000394536 PPP2R5EQ16537 467 aa17.44■□□□□ 0.38
PCDH1-203ENST00000394536 VSIG1Q86XK7 387 aa17.44■□□□□ 0.38
PCDH1-203ENST00000394536 HAS1Q92839 578 aa17.44■□□□□ 0.38
PCDH1-203ENST00000394536 CAVIN3Q969G5 261 aa17.44■□□□□ 0.38
PCDH1-203ENST00000394536 TDRD3Q9H7E2 651 aaKnown RBP17.44■□□□□ 0.38
PCDH1-203ENST00000394536 ODF2LQ9ULJ1 636 aa17.44■□□□□ 0.38
PCDH1-203ENST00000394536 LOC102724159A0A0B4J2E5 919 aa17.44■□□□□ 0.38
PCDH1-203ENST00000394536 GAP43P17677 238 aa17.44■□□□□ 0.38
PCDH1-203ENST00000394536 SOX5P35711 763 aa17.44■□□□□ 0.38
PCDH1-203ENST00000394536 PWP2Q15269 919 aaKnown RBP17.44■□□□□ 0.38
PCDH1-203ENST00000394536 EDRF1Q3B7T1 1238 aa17.44■□□□□ 0.38
PCDH1-203ENST00000394536 IKZF4Q9H2S9 585 aa17.44■□□□□ 0.38
PCDH1-203ENST00000394536 CD248Q9HCU0 757 aa17.44■□□□□ 0.38
PCDH1-203ENST00000394536 KLC4Q9NSK0 619 aa17.44■□□□□ 0.38
PCDH1-203ENST00000394536 POLLQ9UGP5 575 aa17.44■□□□□ 0.38
PCDH1-203ENST00000394536 MYH8P13535 1937 aa17.44■□□□□ 0.38
PCDH1-203ENST00000394536 TOM1O60784 492 aa17.44■□□□□ 0.38
PCDH1-203ENST00000394536 FAM107AO95990 144 aa17.44■□□□□ 0.38
PCDH1-203ENST00000394536 PMS2P54278 862 aa17.44■□□□□ 0.38
PCDH1-203ENST00000394536 RFFLQ8WZ73 363 aa17.44■□□□□ 0.38
PCDH1-203ENST00000394536 DNAJC19Q96DA6 116 aa17.44■□□□□ 0.38
PCDH1-203ENST00000394536 HAUS2Q9NVX0 235 aa17.44■□□□□ 0.38
PCDH1-203ENST00000394536 ATMINO43313 823 aaPredicted RBP17.43■□□□□ 0.38
PCDH1-203ENST00000394536 KDM7AQ6ZMT4 941 aa17.43■□□□□ 0.38
PCDH1-203ENST00000394536 SYN2Q92777 582 aaPredicted RBP17.43■□□□□ 0.38
PCDH1-203ENST00000394536 KIFAP3Q92845 792 aa17.43■□□□□ 0.38
PCDH1-203ENST00000394536 NACC1Q96RE7 527 aa17.43■□□□□ 0.38
PCDH1-203ENST00000394536 FNBP1Q96RU3 617 aa17.43■□□□□ 0.38
PCDH1-203ENST00000394536 RUSC1Q9BVN2 902 aa17.43■□□□□ 0.38
PCDH1-203ENST00000394536 RPS6KA5O75582 802 aa17.43■□□□□ 0.38
PCDH1-203ENST00000394536 ALAS1P13196 640 aa17.43■□□□□ 0.38
PCDH1-203ENST00000394536 KRT15P19012 456 aa17.43■□□□□ 0.38
PCDH1-203ENST00000394536 CRKP46108 304 aa17.43■□□□□ 0.38
PCDH1-203ENST00000394536 UAP1Q16222 522 aaPredicted RBP17.43■□□□□ 0.38
PCDH1-203ENST00000394536 SGO2Q562F6 1265 aa17.43■□□□□ 0.38
PCDH1-203ENST00000394536 XKR9Q5GH70 373 aa17.43■□□□□ 0.38
PCDH1-203ENST00000394536 KAZNQ674X7 775 aa17.43■□□□□ 0.38
PCDH1-203ENST00000394536 NUGGCQ68CJ6 796 aa17.43■□□□□ 0.38
PCDH1-203ENST00000394536 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.43■□□□□ 0.38
PCDH1-203ENST00000394536 PJA2O43164 708 aa17.43■□□□□ 0.38
PCDH1-203ENST00000394536 SMTNP53814 917 aa17.43■□□□□ 0.38
PCDH1-203ENST00000394536 HVCN1Q96D96 273 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms