RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 ANAPC5Q9UJX4 755 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 CYP2C8P10632 490 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 GARSP41250 739 aaKnown RBP5.3□□□□□ -1.56
PCDH9-201ENST00000377861 RXRGP48443 463 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 MCL1Q07820 350 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 RSAD2Q8WXG1 361 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 TRAF3IP3Q9Y228 551 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 DHX9Q08211 1270 aaKnown RBP5.3□□□□□ -1.56
PCDH9-201ENST00000377861 AP1ARQ63HQ0 302 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 CCDC63Q8NA47 563 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 RAB20Q9NX57 234 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 ANGPTL3Q9Y5C1 460 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 RNF168Q8IYW5 571 aaPredicted RBP5.3□□□□□ -1.56
PCDH9-201ENST00000377861 ANKRD13AQ8IZ07 590 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 JADE3Q92613 823 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 TRIM15Q9C019 465 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 ERI2A8K979 691 aaKnown RBP5.3□□□□□ -1.56
PCDH9-201ENST00000377861 CTNND1O60716 968 aaKnown RBP5.3□□□□□ -1.56
PCDH9-201ENST00000377861 CCDC124Q96CT7 223 aaKnown RBP5.3□□□□□ -1.56
PCDH9-201ENST00000377861 NR1H4Q96RI1 486 aaPredicted RBP5.3□□□□□ -1.56
PCDH9-201ENST00000377861 PYGBP11216 843 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 SH3RF1Q7Z6J0 888 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 PNMA8AQ86V59 439 aaPredicted RBP5.3□□□□□ -1.56
PCDH9-201ENST00000377861 EHD4Q9H223 541 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 MAPRE3Q9UPY8 281 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 KCNK3O14649 394 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 CLASP2O75122 1294 aaKnown RBP5.3□□□□□ -1.56
PCDH9-201ENST00000377861 NEBLO76041 1014 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 NUDT17P0C025 328 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 ZAP70P43403 619 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 GRID1Q9ULK0 1009 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 TGDSO95455 350 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 ZC3H6P61129 1189 aaKnown RBP5.3□□□□□ -1.56
PCDH9-201ENST00000377861 PSTKQ8IV42 348 aaKnown RBP5.3□□□□□ -1.56
PCDH9-201ENST00000377861 PEX19P40855 299 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 TNIP2Q8NFZ5 429 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.3□□□□□ -1.56
PCDH9-201ENST00000377861 MAGOHBQ96A72 148 aaKnown RBP5.3□□□□□ -1.56
PCDH9-201ENST00000377861 PIK3AP1Q6ZUJ8 805 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 DRG1Q9Y295 367 aaKnown RBP5.3□□□□□ -1.56
PCDH9-201ENST00000377861 ARL4CP56559 192 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 EFL1Q7Z2Z2 1120 aaKnown RBP5.3□□□□□ -1.56
PCDH9-201ENST00000377861 BHMT2Q9H2M3 363 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 DCCP43146 1447 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 NR2F2P24468 414 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 ATXN2LQ8WWM7 1075 aaKnown RBP5.3□□□□□ -1.56
PCDH9-201ENST00000377861 TMEM237Q96Q45 408 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 CCT8L1PA6NM43 557 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 GSTA3Q16772 222 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 PPIP5K2O43314 1243 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 P4HBP07237 508 aaKnown RBP5.3□□□□□ -1.56
PCDH9-201ENST00000377861 FOXO4P98177 505 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 XXYLT1Q8NBI6 393 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 NLRP7Q8WX94 980 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 AZI2Q9H6S1 392 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 PARP3Q9Y6F1 533 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 FKBP6O75344 327 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 FGD4Q96M96 766 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 LY9Q9HBG7 655 aa5.3□□□□□ -1.56
PCDH9-201ENST00000377861 H7C0S8 307 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 ZBTB5O15062 677 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 MAP3K7O43318 606 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 FBXO11Q86XK2 927 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 ATP5J2-PTCD1G3V325 749 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 SLC22A2O15244 555 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 GAS7O60861 476 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 KIFC2Q96AC6 838 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 FAM210AQ96ND0 272 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 KRT12Q99456 494 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 RBAK-RBAKDNI3L0D1 243 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 FBXO33Q7Z6M2 555 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 CD163L1Q9NR16 1453 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 C2orf40Q9H1Z8 148 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 ADKP55263 362 aaKnown RBP5.29□□□□□ -1.56
PCDH9-201ENST00000377861 KCNK9Q9NPC2 374 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 ZNF804BA4D1E1 1349 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 MACROD2A1Z1Q3 448 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 IGKV5-2P06315 115 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 HSPA9P38646 679 aaKnown RBP5.29□□□□□ -1.56
PCDH9-201ENST00000377861 ECE1P42892 770 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 ARHGEF1Q92888 912 aaKnown RBP5.29□□□□□ -1.56
PCDH9-201ENST00000377861 TBCBQ99426 244 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 SLC12A6Q9UHW9 1150 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 FBXO2Q9UK22 296 aaPredicted RBP5.29□□□□□ -1.56
PCDH9-201ENST00000377861 AP4S1Q9Y587 144 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 PHACTR2O75167 634 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 EPB41L5Q9HCM4 733 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 C1orf112Q9NSG2 853 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 SERPINB2P05120 415 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 ST6GALNAC4Q9H4F1 302 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 ATP6V0A4Q9HBG4 840 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 FHOD1Q9Y613 1164 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 RAD54BQ9Y620 910 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 POTECB2RU33 542 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 AP2B1P63010 937 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 FAM160B1Q5W0V3 765 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 KRT27Q7Z3Y8 459 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 NT5C1BQ96P26 610 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 IQGAP3Q86VI3 1631 aa5.29□□□□□ -1.56
PCDH9-201ENST00000377861 C16orf96A6NNT2 1141 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms