RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 POLR3CQ9BUI4 534 aaPredicted RBP18.72■□□□□ 0.59
TRIM27-201ENST00000377194 CHMP2AO43633 222 aa18.71■□□□□ 0.59
TRIM27-201ENST00000377194 SLITRK3O94933 977 aa18.71■□□□□ 0.59
TRIM27-201ENST00000377194 CEP85LQ5SZL2 805 aa18.71■□□□□ 0.59
TRIM27-201ENST00000377194 ALS2CLQ60I27 953 aa18.71■□□□□ 0.59
TRIM27-201ENST00000377194 SLC40A1Q9NP59 571 aa18.71■□□□□ 0.59
TRIM27-201ENST00000377194 SYNPO2Q9UMS6 1093 aa18.71■□□□□ 0.59
TRIM27-201ENST00000377194 SCAF8Q9UPN6 1271 aaKnown RBP18.71■□□□□ 0.59
TRIM27-201ENST00000377194 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.71■□□□□ 0.59
TRIM27-201ENST00000377194 RABGAP1Q9Y3P9 1069 aa18.71■□□□□ 0.59
TRIM27-201ENST00000377194 SSU72P8A0A1W2PR75 194 aa18.71■□□□□ 0.59
TRIM27-201ENST00000377194 TACC1O75410 805 aa18.71■□□□□ 0.59
TRIM27-201ENST00000377194 NEBLO76041 1014 aa18.71■□□□□ 0.59
TRIM27-201ENST00000377194 ACTN1P12814 892 aa18.71■□□□□ 0.59
TRIM27-201ENST00000377194 RXRBP28702 533 aa18.71■□□□□ 0.59
TRIM27-201ENST00000377194 ARID5AQ03989 594 aa18.71■□□□□ 0.59
TRIM27-201ENST00000377194 SFMBT2Q5VUG0 894 aa18.71■□□□□ 0.59
TRIM27-201ENST00000377194 RINT1Q6NUQ1 792 aa18.71■□□□□ 0.59
TRIM27-201ENST00000377194 DPY19L2P1Q6NXN4 242 aa18.71■□□□□ 0.59
TRIM27-201ENST00000377194 PPP4R3CPQ6ZMV5 832 aa18.71■□□□□ 0.59
TRIM27-201ENST00000377194 LARGE2Q8N3Y3 721 aa18.71■□□□□ 0.59
TRIM27-201ENST00000377194 OSBPL9Q96SU4 736 aa18.71■□□□□ 0.59
TRIM27-201ENST00000377194 STIM2Q9P246 746 aa18.71■□□□□ 0.59
TRIM27-201ENST00000377194 PSMD10O75832 226 aa18.7■□□□□ 0.58
TRIM27-201ENST00000377194 AKAP3O75969 853 aa18.7■□□□□ 0.58
TRIM27-201ENST00000377194 SATB1Q01826 763 aa18.7■□□□□ 0.58
TRIM27-201ENST00000377194 SPDYE2Q495Y8 402 aa18.7■□□□□ 0.58
TRIM27-201ENST00000377194 EMBQ6PCB8 327 aa18.7■□□□□ 0.58
TRIM27-201ENST00000377194 TPH2Q8IWU9 490 aa18.7■□□□□ 0.58
TRIM27-201ENST00000377194 VCPKMTQ9H867 229 aa18.7■□□□□ 0.58
TRIM27-201ENST00000377194 GOPCQ9HD26 462 aa18.7■□□□□ 0.58
TRIM27-201ENST00000377194 PJA2O43164 708 aa18.7■□□□□ 0.58
TRIM27-201ENST00000377194 EYA4O95677 639 aa18.7■□□□□ 0.58
TRIM27-201ENST00000377194 SLC9A1P19634 815 aa18.7■□□□□ 0.58
TRIM27-201ENST00000377194 CASP4P49662 377 aa18.7■□□□□ 0.58
TRIM27-201ENST00000377194 E2F5Q15329 346 aa18.7■□□□□ 0.58
TRIM27-201ENST00000377194 ENOX2Q16206 610 aaKnown RBP18.7■□□□□ 0.58
TRIM27-201ENST00000377194 SLC9C1Q4G0N8 1177 aa18.7■□□□□ 0.58
TRIM27-201ENST00000377194 ZNF572Q7Z3I7 529 aaPredicted RBP18.7■□□□□ 0.58
TRIM27-201ENST00000377194 OGFOD1Q8N543 542 aa18.7■□□□□ 0.58
TRIM27-201ENST00000377194 TTLL6Q8N841 843 aa18.7■□□□□ 0.58
TRIM27-201ENST00000377194 CCDC43Q96MW1 224 aaKnown RBP18.7■□□□□ 0.58
TRIM27-201ENST00000377194 SCLT1Q96NL6 688 aa18.7■□□□□ 0.58
TRIM27-201ENST00000377194 GANQ9H2C0 597 aa18.7■□□□□ 0.58
TRIM27-201ENST00000377194 RANBP17Q9H2T7 1088 aaKnown RBP18.7■□□□□ 0.58
TRIM27-201ENST00000377194 HDAC9Q9UKV0 1011 aa18.7■□□□□ 0.58
TRIM27-201ENST00000377194 TNS1Q9HBL0 1735 aaKnown RBP18.7■□□□□ 0.58
TRIM27-201ENST00000377194 ESYT3A0FGR9 886 aa18.69■□□□□ 0.58
TRIM27-201ENST00000377194 GCOM1H8Y6P7 765 aaPredicted RBP18.69■□□□□ 0.58
TRIM27-201ENST00000377194 NCK2O43639 380 aa18.69■□□□□ 0.58
TRIM27-201ENST00000377194 BUB1O43683 1085 aa18.69■□□□□ 0.58
TRIM27-201ENST00000377194 POLR2MP0CAP2 368 aa18.69■□□□□ 0.58
TRIM27-201ENST00000377194 LRCH2Q5VUJ6 765 aa18.69■□□□□ 0.58
TRIM27-201ENST00000377194 SYN2Q92777 582 aaPredicted RBP18.69■□□□□ 0.58
TRIM27-201ENST00000377194 DYDC2Q96IM9 177 aa18.69■□□□□ 0.58
TRIM27-201ENST00000377194 EPN3Q9H201 632 aa18.69■□□□□ 0.58
TRIM27-201ENST00000377194 WRAP73Q9P2S5 460 aaPredicted RBP18.69■□□□□ 0.58
TRIM27-201ENST00000377194 ASTN1O14525 1302 aa18.69■□□□□ 0.58
TRIM27-201ENST00000377194 RBAK-RBAKDNI3L0D1 243 aa18.69■□□□□ 0.58
TRIM27-201ENST00000377194 SERPING1P05155 500 aa18.69■□□□□ 0.58
TRIM27-201ENST00000377194 ITIH3Q06033 890 aa18.69■□□□□ 0.58
TRIM27-201ENST00000377194 SPRED3Q2MJR0 410 aa18.69■□□□□ 0.58
TRIM27-201ENST00000377194 CCDC181Q5TID7 509 aa18.69■□□□□ 0.58
TRIM27-201ENST00000377194 ARHGAP27Q6ZUM4 889 aa18.69■□□□□ 0.58
TRIM27-201ENST00000377194 DHX37Q8IY37 1157 aaKnown RBP18.69■□□□□ 0.58
TRIM27-201ENST00000377194 FAM133AQ8N9E0 248 aa18.69■□□□□ 0.58
TRIM27-201ENST00000377194 CAMKK2Q96RR4 588 aa18.69■□□□□ 0.58
TRIM27-201ENST00000377194 CCT8L2Q96SF2 557 aa18.69■□□□□ 0.58
TRIM27-201ENST00000377194 ARMCX3Q9UH62 379 aaPredicted RBP18.69■□□□□ 0.58
TRIM27-201ENST00000377194 ZSCAN5CA6NGD5 496 aaPredicted RBP18.68■□□□□ 0.58
TRIM27-201ENST00000377194 PDXKO00764 312 aa18.68■□□□□ 0.58
TRIM27-201ENST00000377194 CLIC2O15247 247 aa18.68■□□□□ 0.58
TRIM27-201ENST00000377194 ATP2C2O75185 946 aa18.68■□□□□ 0.58
TRIM27-201ENST00000377194 GCNT3O95395 438 aa18.68■□□□□ 0.58
TRIM27-201ENST00000377194 FAM153BP0C7A2 387 aa18.68■□□□□ 0.58
TRIM27-201ENST00000377194 RAPGEF1Q13905 1077 aa18.68■□□□□ 0.58
TRIM27-201ENST00000377194 FAM153CQ494X1 144 aa18.68■□□□□ 0.58
TRIM27-201ENST00000377194 MICALCLQ6ZW33 695 aa18.68■□□□□ 0.58
TRIM27-201ENST00000377194 FAM153AQ9UHL3 310 aa18.68■□□□□ 0.58
TRIM27-201ENST00000377194 A0A087X0T9 212 aa18.68■□□□□ 0.58
TRIM27-201ENST00000377194 RASSF9O75901 435 aa18.68■□□□□ 0.58
TRIM27-201ENST00000377194 FAM228BP0C875 321 aa18.68■□□□□ 0.58
TRIM27-201ENST00000377194 ARP10275 920 aa18.68■□□□□ 0.58
TRIM27-201ENST00000377194 KCNA3P22001 575 aa18.68■□□□□ 0.58
TRIM27-201ENST00000377194 RUBCNQ92622 972 aa18.68■□□□□ 0.58
TRIM27-201ENST00000377194 SLC5A5Q92911 643 aa18.68■□□□□ 0.58
TRIM27-201ENST00000377194 CAVIN3Q969G5 261 aa18.68■□□□□ 0.58
TRIM27-201ENST00000377194 DDX20Q9UHI6 824 aaKnown RBP18.68■□□□□ 0.58
TRIM27-201ENST00000377194 ATXN2Q99700 1313 aaKnown RBP18.68■□□□□ 0.58
TRIM27-201ENST00000377194 ZNF233A6NK53 670 aa18.67■□□□□ 0.58
TRIM27-201ENST00000377194 E7EVH7 732 aa18.67■□□□□ 0.58
TRIM27-201ENST00000377194 TGFB1I1O43294 461 aa18.67■□□□□ 0.58
TRIM27-201ENST00000377194 EPS15P42566 896 aa18.67■□□□□ 0.58
TRIM27-201ENST00000377194 GUCY2FP51841 1108 aa18.67■□□□□ 0.58
TRIM27-201ENST00000377194 CDR1P51861 262 aa18.67■□□□□ 0.58
TRIM27-201ENST00000377194 SMTNP53814 917 aa18.67■□□□□ 0.58
TRIM27-201ENST00000377194 PTGISQ16647 500 aa18.67■□□□□ 0.58
TRIM27-201ENST00000377194 BMT2Q1RMZ1 405 aa18.67■□□□□ 0.58
TRIM27-201ENST00000377194 C8orf74Q6P047 294 aa18.67■□□□□ 0.58
TRIM27-201ENST00000377194 C1orf186Q6ZWK4 172 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms