RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.27□□□□□ -0.45
HLA-DQA1-202ENST00000374949 VWA3AA6NCI4 1184 aa12.27□□□□□ -0.45
HLA-DQA1-202ENST00000374949 GRXCR2A6NFK2 248 aa12.27□□□□□ -0.45
HLA-DQA1-202ENST00000374949 PRR33A8MZF0 331 aa12.27□□□□□ -0.45
HLA-DQA1-202ENST00000374949 H3BRB1 525 aa12.27□□□□□ -0.45
HLA-DQA1-202ENST00000374949 NEMFO60524 1076 aa12.27□□□□□ -0.45
HLA-DQA1-202ENST00000374949 NR1I2O75469 434 aa12.27□□□□□ -0.45
HLA-DQA1-202ENST00000374949 CYP3A4P08684 503 aa12.27□□□□□ -0.45
HLA-DQA1-202ENST00000374949 LONP1P36776 959 aaKnown RBP12.27□□□□□ -0.45
HLA-DQA1-202ENST00000374949 SREBF1P36956 1147 aa12.27□□□□□ -0.45
HLA-DQA1-202ENST00000374949 NDUFA8P51970 172 aa12.27□□□□□ -0.45
HLA-DQA1-202ENST00000374949 ARHGAP4P98171 946 aa12.27□□□□□ -0.45
HLA-DQA1-202ENST00000374949 GPM6BQ13491 265 aa12.27□□□□□ -0.45
HLA-DQA1-202ENST00000374949 SNW1Q13573 536 aaKnown RBP12.27□□□□□ -0.45
HLA-DQA1-202ENST00000374949 ZSCAN23Q3MJ62 389 aa12.27□□□□□ -0.45
HLA-DQA1-202ENST00000374949 MOXD1Q6UVY6 613 aa12.27□□□□□ -0.45
HLA-DQA1-202ENST00000374949 FMR1NBQ8N0W7 255 aaPredicted RBP12.27□□□□□ -0.45
HLA-DQA1-202ENST00000374949 BANK1Q8NDB2 785 aa12.27□□□□□ -0.45
HLA-DQA1-202ENST00000374949 NEK9Q8TD19 979 aa12.27□□□□□ -0.45
HLA-DQA1-202ENST00000374949 UIMC1Q96RL1 719 aa12.27□□□□□ -0.45
HLA-DQA1-202ENST00000374949 IFIH1Q9BYX4 1025 aaKnown RBP12.27□□□□□ -0.45
HLA-DQA1-202ENST00000374949 CSRNP2Q9H175 543 aa12.27□□□□□ -0.45
HLA-DQA1-202ENST00000374949 TMEM60Q9H2L4 133 aa12.27□□□□□ -0.45
HLA-DQA1-202ENST00000374949 TUT1Q9H6E5 874 aaKnown RBP12.27□□□□□ -0.45
HLA-DQA1-202ENST00000374949 TELO2Q9Y4R8 837 aa12.27□□□□□ -0.45
HLA-DQA1-202ENST00000374949 KIAA1671Q9BY89 1806 aa12.26□□□□□ -0.45
HLA-DQA1-202ENST00000374949 H3BNC9 293 aa12.26□□□□□ -0.45
HLA-DQA1-202ENST00000374949 NOP56O00567 594 aaKnown RBP12.26□□□□□ -0.45
HLA-DQA1-202ENST00000374949 CSPG5O95196 566 aa12.26□□□□□ -0.45
HLA-DQA1-202ENST00000374949 OR52Z1P0C646 297 aa12.26□□□□□ -0.45
HLA-DQA1-202ENST00000374949 PFKFB1P16118 471 aa12.26□□□□□ -0.45
HLA-DQA1-202ENST00000374949 ZNF76P36508 570 aa12.26□□□□□ -0.45
HLA-DQA1-202ENST00000374949 GRIN1Q05586 938 aa12.26□□□□□ -0.45
HLA-DQA1-202ENST00000374949 IL17AQ16552 155 aa12.26□□□□□ -0.45
HLA-DQA1-202ENST00000374949 CALCRLQ16602 461 aa12.26□□□□□ -0.45
HLA-DQA1-202ENST00000374949 SPECC1Q5M775 1068 aa12.26□□□□□ -0.45
HLA-DQA1-202ENST00000374949 TMEM192Q8IY95 271 aa12.26□□□□□ -0.45
HLA-DQA1-202ENST00000374949 CRYGNQ8WXF5 182 aa12.26□□□□□ -0.45
HLA-DQA1-202ENST00000374949 PABPC5Q96DU9 382 aaKnown RBP12.26□□□□□ -0.45
HLA-DQA1-202ENST00000374949 MBOAT7Q96N66 472 aa12.26□□□□□ -0.45
HLA-DQA1-202ENST00000374949 SAMD11Q96NU1 681 aa12.26□□□□□ -0.45
HLA-DQA1-202ENST00000374949 MTMR9Q96QG7 549 aa12.26□□□□□ -0.45
HLA-DQA1-202ENST00000374949 NUP62CLQ9H1M0 184 aa12.26□□□□□ -0.45
HLA-DQA1-202ENST00000374949 RNPEPQ9H4A4 650 aa12.26□□□□□ -0.45
HLA-DQA1-202ENST00000374949 CLSTN2Q9H4D0 955 aa12.26□□□□□ -0.45
HLA-DQA1-202ENST00000374949 NSUN3Q9H649 340 aaKnown RBP12.26□□□□□ -0.45
HLA-DQA1-202ENST00000374949 SETD4Q9NVD3 440 aa12.26□□□□□ -0.45
HLA-DQA1-202ENST00000374949 DDX25Q9UHL0 483 aaKnown RBP12.26□□□□□ -0.45
HLA-DQA1-202ENST00000374949 KCNH3Q9ULD8 1083 aa12.26□□□□□ -0.45
HLA-DQA1-202ENST00000374949 HPSEQ9Y251 543 aa12.26□□□□□ -0.45
HLA-DQA1-202ENST00000374949 ZNF318Q5VUA4 2279 aa12.25□□□□□ -0.45
HLA-DQA1-202ENST00000374949 MARCH6O60337 910 aa12.25□□□□□ -0.45
HLA-DQA1-202ENST00000374949 KINO60870 393 aaKnown RBP12.25□□□□□ -0.45
HLA-DQA1-202ENST00000374949 ZNF202O95125 648 aa12.25□□□□□ -0.45
HLA-DQA1-202ENST00000374949 TDP2O95551 362 aa12.25□□□□□ -0.45
HLA-DQA1-202ENST00000374949 CIITAP33076 1130 aa12.25□□□□□ -0.45
HLA-DQA1-202ENST00000374949 CTNNB1P35222 781 aa12.25□□□□□ -0.45
HLA-DQA1-202ENST00000374949 SYKP43405 635 aa12.25□□□□□ -0.45
HLA-DQA1-202ENST00000374949 SP4Q02446 784 aa12.25□□□□□ -0.45
HLA-DQA1-202ENST00000374949 ZP2Q05996 745 aa12.25□□□□□ -0.45
HLA-DQA1-202ENST00000374949 SEMA3FQ13275 785 aa12.25□□□□□ -0.45
HLA-DQA1-202ENST00000374949 GSE1Q14687 1217 aa12.25□□□□□ -0.45
HLA-DQA1-202ENST00000374949 Q4G0T1 1027 aa12.25□□□□□ -0.45
HLA-DQA1-202ENST00000374949 ALYREFQ86V81 257 aaKnown RBP12.25□□□□□ -0.45
HLA-DQA1-202ENST00000374949 LMBR1Q8WVP7 490 aa12.25□□□□□ -0.45
HLA-DQA1-202ENST00000374949 TOP1MTQ969P6 601 aa12.25□□□□□ -0.45
HLA-DQA1-202ENST00000374949 TIGD1Q96MW7 591 aa12.25□□□□□ -0.45
HLA-DQA1-202ENST00000374949 TNMDQ9H2S6 317 aa12.25□□□□□ -0.45
HLA-DQA1-202ENST00000374949 CLDND1Q9NY35 253 aa12.25□□□□□ -0.45
HLA-DQA1-202ENST00000374949 FRMPD4Q14CM0 1322 aa12.25□□□□□ -0.45
HLA-DQA1-202ENST00000374949 KAT6AQ92794 2004 aa12.25□□□□□ -0.45
HLA-DQA1-202ENST00000374949 DCXO43602 365 aa12.24□□□□□ -0.45
HLA-DQA1-202ENST00000374949 SLC37A4O43826 429 aa12.24□□□□□ -0.45
HLA-DQA1-202ENST00000374949 CAND2O75155 1236 aa12.24□□□□□ -0.45
HLA-DQA1-202ENST00000374949 TGFB3P10600 412 aa12.24□□□□□ -0.45
HLA-DQA1-202ENST00000374949 ALADP13716 330 aa12.24□□□□□ -0.45
HLA-DQA1-202ENST00000374949 TXKP42681 527 aa12.24□□□□□ -0.45
HLA-DQA1-202ENST00000374949 ZNF445P59923 1031 aa12.24□□□□□ -0.45
HLA-DQA1-202ENST00000374949 MRPS9P82933 396 aaKnown RBP12.24□□□□□ -0.45
HLA-DQA1-202ENST00000374949 PDIA5Q14554 519 aa12.24□□□□□ -0.45
HLA-DQA1-202ENST00000374949 COL19A1Q14993 1142 aa12.24□□□□□ -0.45
HLA-DQA1-202ENST00000374949 CLUL1Q15846 466 aa12.24□□□□□ -0.45
HLA-DQA1-202ENST00000374949 CAMK4Q16566 473 aa12.24□□□□□ -0.45
HLA-DQA1-202ENST00000374949 TMEM266Q2M3C6 531 aa12.24□□□□□ -0.45
HLA-DQA1-202ENST00000374949 PUS10Q3MIT2 529 aaKnown RBP12.24□□□□□ -0.45
HLA-DQA1-202ENST00000374949 GNPTABQ3T906 1256 aa12.24□□□□□ -0.45
HLA-DQA1-202ENST00000374949 UTP14CQ5TAP6 766 aaKnown RBP12.24□□□□□ -0.45
HLA-DQA1-202ENST00000374949 METTL7BQ6UX53 244 aa12.24□□□□□ -0.45
HLA-DQA1-202ENST00000374949 CYFIP1Q7L576 1253 aa12.24□□□□□ -0.45
HLA-DQA1-202ENST00000374949 RPAINQ86UA6 219 aa12.24□□□□□ -0.45
HLA-DQA1-202ENST00000374949 POTEDQ86YR6 584 aa12.24□□□□□ -0.45
HLA-DQA1-202ENST00000374949 AK8Q96MA6 479 aa12.24□□□□□ -0.45
HLA-DQA1-202ENST00000374949 GPR20Q99678 358 aa12.24□□□□□ -0.45
HLA-DQA1-202ENST00000374949 SDF4Q9BRK5 362 aa12.24□□□□□ -0.45
HLA-DQA1-202ENST00000374949 ADGRA3Q8IWK6 1321 aa12.23□□□□□ -0.45
HLA-DQA1-202ENST00000374949 TBX3O15119 743 aa12.23□□□□□ -0.45
HLA-DQA1-202ENST00000374949 GHRP10912 638 aa12.23□□□□□ -0.45
HLA-DQA1-202ENST00000374949 TXLNAP40222 546 aa12.23□□□□□ -0.45
HLA-DQA1-202ENST00000374949 TECP42680 631 aa12.23□□□□□ -0.45
HLA-DQA1-202ENST00000374949 RUFY4Q6ZNE9 571 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms