RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 GRAMD1CQ8IYS0 662 aa13.21□□□□□ -0.29
NPLOC4-202ENST00000374747 GDAP1Q8TB36 358 aa13.21□□□□□ -0.29
NPLOC4-202ENST00000374747 FAM81BQ96LP2 452 aa13.21□□□□□ -0.29
NPLOC4-202ENST00000374747 NACC1Q96RE7 527 aa13.21□□□□□ -0.29
NPLOC4-202ENST00000374747 PCDHB4Q9Y5E5 795 aa13.21□□□□□ -0.29
NPLOC4-202ENST00000374747 SPDYE16A6NNV3 312 aaPredicted RBP13.21□□□□□ -0.29
NPLOC4-202ENST00000374747 CHRNA5P30532 468 aa13.21□□□□□ -0.29
NPLOC4-202ENST00000374747 UBE2SQ16763 222 aa13.21□□□□□ -0.29
NPLOC4-202ENST00000374747 SPDYE2Q495Y8 402 aa13.21□□□□□ -0.29
NPLOC4-202ENST00000374747 MCUQ8NE86 351 aa13.21□□□□□ -0.29
NPLOC4-202ENST00000374747 FGFR1OP2Q9NVK5 253 aa13.21□□□□□ -0.29
NPLOC4-202ENST00000374747 HERC5Q9UII4 1024 aaKnown RBP13.21□□□□□ -0.29
NPLOC4-202ENST00000374747 MCF2LO15068 1137 aa13.21□□□□□ -0.3
NPLOC4-202ENST00000374747 MAPK13O15264 365 aa13.21□□□□□ -0.3
NPLOC4-202ENST00000374747 NMT2O60551 498 aa13.21□□□□□ -0.3
NPLOC4-202ENST00000374747 CASP2P42575 452 aa13.21□□□□□ -0.3
NPLOC4-202ENST00000374747 SEPT2Q15019 361 aa13.21□□□□□ -0.3
NPLOC4-202ENST00000374747 RCSD1Q6JBY9 416 aa13.21□□□□□ -0.3
NPLOC4-202ENST00000374747 TBC1D1Q86TI0 1168 aaPredicted RBP13.21□□□□□ -0.3
NPLOC4-202ENST00000374747 ADAM21Q9UKJ8 722 aa13.21□□□□□ -0.3
NPLOC4-202ENST00000374747 CACNA1FO60840 1977 aa13.21□□□□□ -0.3
NPLOC4-202ENST00000374747 TNS2Q63HR2 1409 aa13.21□□□□□ -0.3
NPLOC4-202ENST00000374747 TOPAZ1Q8N9V7 1692 aa13.21□□□□□ -0.3
NPLOC4-202ENST00000374747 CCNE1P24864 410 aa13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 CDC27P30260 824 aa13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 CCND2P30279 289 aa13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 TMED1Q13445 227 aa13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 ICE2Q659A1 982 aa13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 TSC22D3Q99576 134 aa13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 CHUKO15111 745 aa13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 SRGAP2BP0DMP2 458 aa13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 UBXN2AP68543 259 aa13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 SLC7A5Q01650 507 aa13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 STYK1Q6J9G0 422 aa13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 ZNF449Q6P9G9 518 aa13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 DCLK2Q8N568 766 aa13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 SERPINI1Q99574 410 aa13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 LMNAP02545 664 aaKnown RBP13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 ZNF579Q8NAF0 562 aaKnown RBP13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 CCDC124Q96CT7 223 aaKnown RBP13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 DAGLAQ9Y4D2 1042 aa13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 NUB1Q9Y5A7 615 aa13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 HNRNPDLO14979 420 aaKnown RBP13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 KRT1P04264 644 aa13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 S100BP04271 92 aaPredicted RBP13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 PTPREP23469 700 aa13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 KPNA2P52292 529 aaKnown RBP13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 SARM1Q6SZW1 724 aa13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 PIP4K2CQ8TBX8 421 aa13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 EIF2AQ9BY44 585 aaKnown RBP13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 MRPL47Q9HD33 250 aaKnown RBP13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 LRRIQ4A6NIV6 560 aa13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 MFAP3LO75121 409 aa13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 ORC2Q13416 577 aaPredicted RBP13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 LRRC41Q15345 812 aa13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 NBPF9Q3BBW0 867 aa13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 GLE1Q53GS7 698 aaKnown RBP13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 NUGGCQ68CJ6 796 aa13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 APOBEC3FQ8IUX4 373 aaKnown RBP13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 FEM1BQ9UK73 627 aa13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 NFU1Q9UMS0 254 aa13.2□□□□□ -0.3
NPLOC4-202ENST00000374747 BCL9O00512 1426 aa13.19□□□□□ -0.3
NPLOC4-202ENST00000374747 RGL2O15211 777 aa13.19□□□□□ -0.3
NPLOC4-202ENST00000374747 TTI1O43156 1089 aa13.19□□□□□ -0.3
NPLOC4-202ENST00000374747 LRRN2O75325 713 aa13.19□□□□□ -0.3
NPLOC4-202ENST00000374747 POLGP54098 1239 aaPredicted RBP13.19□□□□□ -0.3
NPLOC4-202ENST00000374747 TBC1D10BQ4KMP7 808 aaPredicted RBP13.19□□□□□ -0.3
NPLOC4-202ENST00000374747 DISC1Q9NRI5 854 aa13.19□□□□□ -0.3
NPLOC4-202ENST00000374747 GCNT4Q9P109 453 aa13.19□□□□□ -0.3
NPLOC4-202ENST00000374747 ZNRF3Q9ULT6 936 aa13.19□□□□□ -0.3
NPLOC4-202ENST00000374747 TOM1L1O75674 476 aa13.19□□□□□ -0.3
NPLOC4-202ENST00000374747 DCTN3O75935 186 aa13.19□□□□□ -0.3
NPLOC4-202ENST00000374747 GFPT2O94808 682 aa13.19□□□□□ -0.3
NPLOC4-202ENST00000374747 ACTN1P12814 892 aa13.19□□□□□ -0.3
NPLOC4-202ENST00000374747 CA4P22748 312 aa13.19□□□□□ -0.3
NPLOC4-202ENST00000374747 NRBF2Q96F24 287 aa13.19□□□□□ -0.3
NPLOC4-202ENST00000374747 ANLNQ9NQW6 1124 aa13.19□□□□□ -0.3
NPLOC4-202ENST00000374747 FAM208AQ9UK61 1670 aaKnown RBP13.19□□□□□ -0.3
NPLOC4-202ENST00000374747 CCDC188H7C350 402 aa13.19□□□□□ -0.3
NPLOC4-202ENST00000374747 RESP18Q5W5W9 173 aa13.19□□□□□ -0.3
NPLOC4-202ENST00000374747 HHIPL2Q6UWX4 724 aa13.19□□□□□ -0.3
NPLOC4-202ENST00000374747 KCNF1Q9H3M0 494 aa13.19□□□□□ -0.3
NPLOC4-202ENST00000374747 HSPA8P11142 646 aaKnown RBP13.19□□□□□ -0.3
NPLOC4-202ENST00000374747 BASP1P80723 227 aaKnown RBP13.19□□□□□ -0.3
NPLOC4-202ENST00000374747 CYP27A1Q02318 531 aa13.19□□□□□ -0.3
NPLOC4-202ENST00000374747 PLAAQ9Y263 795 aa13.19□□□□□ -0.3
NPLOC4-202ENST00000374747 SRCAPQ6ZRS2 3230 aa13.19□□□□□ -0.3
NPLOC4-202ENST00000374747 TUBGCP6Q96RT7 1819 aa13.18□□□□□ -0.3
NPLOC4-202ENST00000374747 TADA3O75528 432 aa13.18□□□□□ -0.3
NPLOC4-202ENST00000374747 EEF1B2P24534 225 aaKnown RBP13.18□□□□□ -0.3
NPLOC4-202ENST00000374747 DEUP1Q05D60 604 aa13.18□□□□□ -0.3
NPLOC4-202ENST00000374747 PDCLQ13371 301 aa13.18□□□□□ -0.3
NPLOC4-202ENST00000374747 SLC16A10Q8TF71 515 aa13.18□□□□□ -0.3
NPLOC4-202ENST00000374747 GJB4Q9NTQ9 266 aa13.18□□□□□ -0.3
NPLOC4-202ENST00000374747 ART3Q13508 389 aa13.18□□□□□ -0.3
NPLOC4-202ENST00000374747 ATG16L1Q676U5 607 aa13.18□□□□□ -0.3
NPLOC4-202ENST00000374747 MID2Q9UJV3 735 aa13.18□□□□□ -0.3
NPLOC4-202ENST00000374747 TLK1Q9UKI8 766 aa13.18□□□□□ -0.3
NPLOC4-202ENST00000374747 PPME1Q9Y570 386 aa13.18□□□□□ -0.3
NPLOC4-202ENST00000374747 EEF1DP29692 281 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms