RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 CCDC13Q8IYE1 715 aa15.88■□□□□ 0.13
NDC1-201ENST00000371429 HOMER3Q9NSC5 361 aa15.88■□□□□ 0.13
NDC1-201ENST00000371429 NRBP1Q9UHY1 535 aa15.88■□□□□ 0.13
NDC1-201ENST00000371429 C10orf76Q5T2E6 689 aa15.88■□□□□ 0.13
NDC1-201ENST00000371429 C1orf228Q6PIY5 440 aa15.88■□□□□ 0.13
NDC1-201ENST00000371429 SPATA24Q86W54 205 aa15.88■□□□□ 0.13
NDC1-201ENST00000371429 CCDC170Q8IYT3 715 aa15.88■□□□□ 0.13
NDC1-201ENST00000371429 PROM2Q8N271 834 aa15.88■□□□□ 0.13
NDC1-201ENST00000371429 ADAMTS1Q9UHI8 967 aa15.88■□□□□ 0.13
NDC1-201ENST00000371429 DNAJC12Q9UKB3 198 aa15.88■□□□□ 0.13
NDC1-201ENST00000371429 PRR12Q9ULL5 1215 aa15.88■□□□□ 0.13
NDC1-201ENST00000371429 GARSP41250 739 aaKnown RBP15.87■□□□□ 0.13
NDC1-201ENST00000371429 PDE1BQ01064 536 aa15.87■□□□□ 0.13
NDC1-201ENST00000371429 ALKBH5Q6P6C2 394 aaKnown RBP15.87■□□□□ 0.13
NDC1-201ENST00000371429 B4GALNT4Q76KP1 1039 aa15.87■□□□□ 0.13
NDC1-201ENST00000371429 EFCAB13Q8IY85 973 aa15.87■□□□□ 0.13
NDC1-201ENST00000371429 MB21D1Q8N884 522 aa15.87■□□□□ 0.13
NDC1-201ENST00000371429 EFCAB8A8MWE9 144 aa15.87■□□□□ 0.13
NDC1-201ENST00000371429 CTNND1O60716 968 aaKnown RBP15.87■□□□□ 0.13
NDC1-201ENST00000371429 EPHB1P54762 984 aa15.87■□□□□ 0.13
NDC1-201ENST00000371429 GUCY2DQ02846 1103 aa15.87■□□□□ 0.13
NDC1-201ENST00000371429 CDO1Q16878 200 aa15.87■□□□□ 0.13
NDC1-201ENST00000371429 TMEM35BQ8NCS4 154 aa15.87■□□□□ 0.13
NDC1-201ENST00000371429 GTF3C2Q8WUA4 911 aaPredicted RBP15.87■□□□□ 0.13
NDC1-201ENST00000371429 LMCD1Q9NZU5 365 aa15.87■□□□□ 0.13
NDC1-201ENST00000371429 CDC25BP30305 580 aa15.87■□□□□ 0.13
NDC1-201ENST00000371429 SNX1Q13596 522 aa15.87■□□□□ 0.13
NDC1-201ENST00000371429 BRD3Q15059 726 aa15.87■□□□□ 0.13
NDC1-201ENST00000371429 KNOP1Q1ED39 458 aaKnown RBP15.87■□□□□ 0.13
NDC1-201ENST00000371429 TSGA10IPQ3SY00 556 aa15.87■□□□□ 0.13
NDC1-201ENST00000371429 DARS2Q6PI48 645 aaKnown RBP15.87■□□□□ 0.13
NDC1-201ENST00000371429 ARHGEF18Q6ZSZ5 1173 aa15.87■□□□□ 0.13
NDC1-201ENST00000371429 STOX1Q6ZVD7 989 aa15.87■□□□□ 0.13
NDC1-201ENST00000371429 ELMOD1Q8N336 334 aa15.87■□□□□ 0.13
NDC1-201ENST00000371429 NHEJ1Q9H9Q4 299 aaPredicted RBP15.87■□□□□ 0.13
NDC1-201ENST00000371429 NRXN1Q9ULB1 1477 aa15.87■□□□□ 0.13
NDC1-201ENST00000371429 GPR75-ASB3A0A0A6YYF3 556 aa15.87■□□□□ 0.13
NDC1-201ENST00000371429 PP2D1A8MPX8 630 aa15.87■□□□□ 0.13
NDC1-201ENST00000371429 NR3C2P08235 984 aa15.87■□□□□ 0.13
NDC1-201ENST00000371429 CACYBPQ9HB71 228 aaKnown RBP15.87■□□□□ 0.13
NDC1-201ENST00000371429 FNDC3AQ9Y2H6 1198 aaKnown RBP15.87■□□□□ 0.13
NDC1-201ENST00000371429 RASA1P20936 1047 aa15.86■□□□□ 0.13
NDC1-201ENST00000371429 ECE1P42892 770 aa15.86■□□□□ 0.13
NDC1-201ENST00000371429 ZNF449Q6P9G9 518 aa15.86■□□□□ 0.13
NDC1-201ENST00000371429 SCINQ9Y6U3 715 aa15.86■□□□□ 0.13
NDC1-201ENST00000371429 HDLBPQ00341 1268 aaKnown RBP15.86■□□□□ 0.13
NDC1-201ENST00000371429 C9orf131Q5VYM1 1079 aa15.86■□□□□ 0.13
NDC1-201ENST00000371429 RNF149Q8NC42 400 aa15.86■□□□□ 0.13
NDC1-201ENST00000371429 MYRIPQ8NFW9 859 aa15.86■□□□□ 0.13
NDC1-201ENST00000371429 MCUR1Q96AQ8 359 aa15.86■□□□□ 0.13
NDC1-201ENST00000371429 RABEP2Q9H5N1 569 aa15.86■□□□□ 0.13
NDC1-201ENST00000371429 SPTLC3Q9NUV7 552 aa15.86■□□□□ 0.13
NDC1-201ENST00000371429 CEMIPQ8WUJ3 1361 aa15.86■□□□□ 0.13
NDC1-201ENST00000371429 BCORL1Q5H9F3 1711 aa15.86■□□□□ 0.13
NDC1-201ENST00000371429 KBTBD13C9JR72 458 aa15.86■□□□□ 0.13
NDC1-201ENST00000371429 BUB1BO60566 1050 aaPredicted RBP15.86■□□□□ 0.13
NDC1-201ENST00000371429 SLC25A27O95847 323 aa15.86■□□□□ 0.13
NDC1-201ENST00000371429 PPFIBP2Q8ND30 876 aa15.86■□□□□ 0.13
NDC1-201ENST00000371429 ADAM22Q9P0K1 906 aa15.86■□□□□ 0.13
NDC1-201ENST00000371429 PGRMC1O00264 195 aaKnown RBP15.86■□□□□ 0.13
NDC1-201ENST00000371429 RNF40O75150 1001 aa15.86■□□□□ 0.13
NDC1-201ENST00000371429 FTCDO95954 541 aa15.86■□□□□ 0.13
NDC1-201ENST00000371429 CYP27A1Q02318 531 aa15.86■□□□□ 0.13
NDC1-201ENST00000371429 GPRC5AQ8NFJ5 357 aa15.86■□□□□ 0.13
NDC1-201ENST00000371429 CABS1Q96KC9 395 aa15.86■□□□□ 0.13
NDC1-201ENST00000371429 DAAM1Q9Y4D1 1078 aa15.86■□□□□ 0.13
NDC1-201ENST00000371429 RIMS1Q86UR5 1692 aaKnown RBP15.86■□□□□ 0.13
NDC1-201ENST00000371429 ATP1A3P13637 1013 aa15.85■□□□□ 0.13
NDC1-201ENST00000371429 TMEM270Q6UE05 265 aa15.85■□□□□ 0.13
NDC1-201ENST00000371429 VSTM4Q8IW00 320 aa15.85■□□□□ 0.13
NDC1-201ENST00000371429 TTC1Q99614 292 aa15.85■□□□□ 0.13
NDC1-201ENST00000371429 STK25O00506 426 aa15.85■□□□□ 0.13
NDC1-201ENST00000371429 SF3A3Q12874 501 aaKnown RBP eCLIP15.85■□□□□ 0.137e-7■■■□□ 18.1
NDC1-201ENST00000371429 GAS2L3Q86XJ1 694 aa15.85■□□□□ 0.13
NDC1-201ENST00000371429 GANCQ8TET4 914 aa15.85■□□□□ 0.13
NDC1-201ENST00000371429 SEPT1Q8WYJ6 367 aa15.85■□□□□ 0.13
NDC1-201ENST00000371429 HINFPQ9BQA5 517 aa15.85■□□□□ 0.13
NDC1-201ENST00000371429 TRIM49BA6NDI0 452 aa15.85■□□□□ 0.13
NDC1-201ENST00000371429 HEXIM1O94992 359 aaKnown RBP15.85■□□□□ 0.13
NDC1-201ENST00000371429 INHBAP08476 426 aa15.85■□□□□ 0.13
NDC1-201ENST00000371429 EFNA5P52803 228 aa15.85■□□□□ 0.13
NDC1-201ENST00000371429 TGFB2P61812 414 aa15.85■□□□□ 0.13
NDC1-201ENST00000371429 RWDD4Q6NW29 188 aaKnown RBP15.85■□□□□ 0.13
NDC1-201ENST00000371429 CDC23Q9UJX2 597 aa15.85■□□□□ 0.13
NDC1-201ENST00000371429 TROVE2P10155 538 aaKnown RBP eCLIP15.85■□□□□ 0.13
NDC1-201ENST00000371429 PSMA2P25787 234 aa15.85■□□□□ 0.13
NDC1-201ENST00000371429 BASP1P80723 227 aaKnown RBP15.85■□□□□ 0.13
NDC1-201ENST00000371429 XKR3Q5GH77 459 aa15.85■□□□□ 0.13
NDC1-201ENST00000371429 HAUS6Q7Z4H7 955 aa15.85■□□□□ 0.13
NDC1-201ENST00000371429 ACRBPQ8NEB7 543 aa15.85■□□□□ 0.13
NDC1-201ENST00000371429 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.85■□□□□ 0.13
NDC1-201ENST00000371429 JRKLQ9Y4A0 524 aa15.85■□□□□ 0.13
NDC1-201ENST00000371429 DPYSL4O14531 572 aa15.84■□□□□ 0.13
NDC1-201ENST00000371429 GUCY1A2P33402 732 aa15.84■□□□□ 0.13
NDC1-201ENST00000371429 PSMD6Q15008 389 aa15.84■□□□□ 0.13
NDC1-201ENST00000371429 PARD3BQ8TEW8 1205 aa15.84■□□□□ 0.13
NDC1-201ENST00000371429 SAAL1Q96ER3 474 aa15.84■□□□□ 0.13
NDC1-201ENST00000371429 MTIF3Q9H2K0 278 aaKnown RBP15.84■□□□□ 0.13
NDC1-201ENST00000371429 DONSONQ9NYP3 566 aa15.84■□□□□ 0.13
NDC1-201ENST00000371429 RGL1Q9NZL6 768 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms