RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 REXO1L1PQ8IX06 675 aa7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 RNF169Q8NCN4 708 aa7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 DYDC1Q8WWB3 177 aa7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 DUSP9Q99956 384 aaKnown RBP7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 FAM49AQ9H0Q0 323 aaPredicted RBP7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 DPH5Q9H2P9 285 aa7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 GOLPH3Q9H4A6 298 aa7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 CEP72Q9P209 647 aa7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 PPP1R9AQ9ULJ8 1098 aa7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 PDXKO00764 312 aa7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 ZNF185O15231 689 aa7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 ATP1A1P05023 1023 aaKnown RBP7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 GUCY2DQ02846 1103 aa7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 ECM1Q16610 540 aa7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 TATDN1Q6P1N9 297 aa7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 FMNL3Q8IVF7 1028 aa7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 PAF1Q8N7H5 531 aa7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 SYTL5Q8TDW5 730 aaPredicted RBP7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 USP20Q9Y2K6 914 aa7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 MYH2Q9UKX2 1941 aa7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 A0A0U1RQJ8 604 aa7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 PALMO75781 387 aa7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 TFRCP02786 760 aaKnown RBP7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 VAMP7P51809 220 aa7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 NFRKBQ6P4R8 1299 aa7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 SCARA5Q6ZMJ2 495 aa7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 NYAP1Q6ZVC0 841 aa7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 CDR2LQ86X02 465 aaPredicted RBP7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 ATRIPQ8WXE1 791 aa7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 MRIQ9BWK5 157 aa7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 ZNF302Q9NR11 478 aa7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 JRKLQ9Y4A0 524 aa7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 FHOD1Q9Y613 1164 aa7.74□□□□□ -1.17
TGFBR3-202ENST00000370399 DOT1LQ8TEK3 1739 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 ZNF233A6NK53 670 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 N4BP1O75113 896 aaKnown RBP7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 GGPS1O95749 300 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 PGK2P07205 417 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 OAS2P29728 719 aaKnown RBP7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 ACOT2P49753 483 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 TUBB4BP68371 445 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 CCNA1P78396 465 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 SF3A3Q12874 501 aaKnown RBP eCLIP7.73□□□□□ -1.174e-7■■■■■ 31.4
TGFBR3-202ENST00000370399 SEPT7Q16181 437 aaKnown RBP7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 C9orf131Q5VYM1 1079 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 INTS8Q75QN2 995 aaKnown RBP7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 SESTD1Q86VW0 696 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 CCDC105Q8IYK2 499 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 TTC16Q8NEE8 873 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 MSTO1Q9BUK6 570 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 CWC15Q9P013 229 aaKnown RBP7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 PCDHB4Q9Y5E5 795 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 BZW2Q9Y6E2 419 aaKnown RBP7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 C19orf81C9J6K1 198 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 ADM5C9JUS6 153 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 KLRC4O43908 158 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 PEX10O60683 326 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 UCHL3P15374 230 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 HPDP32754 393 aaPredicted RBP7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 JAG1P78504 1218 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 PTK2Q05397 1052 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 PPP2R5AQ15172 486 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 UBL4BQ8N7F7 174 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 CCDC26Q8TAB7 109 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 UHMK1Q8TAS1 419 aaKnown RBP7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 AP1M1Q9BXS5 423 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 POLR3FQ9H1D9 316 aaPredicted RBP7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 ATP6V0A4Q9HBG4 840 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 SMARCAL1Q9NZC9 954 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 CHORDC1Q9UHD1 332 aaPredicted RBP7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 MTUS1Q9ULD2 1270 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 NOD1Q9Y239 953 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 PDE4DIPQ5VU43 2346 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 KLRG2A4D1S0 409 aaPredicted RBP7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 SLITRK3O94933 977 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 MYCP01106 439 aaPredicted RBP7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 SFNP31947 248 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 CASP5P51878 434 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 MFAP3P55082 362 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 MOB2Q70IA6 237 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 OTOP1Q7RTM1 612 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 RHPN2Q8IUC4 686 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 SYCE1Q8N0S2 351 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 MCPH1Q8NEM0 835 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 ELMO3Q96BJ8 720 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 ZNF653Q96CK0 615 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 MRRFQ96E11 262 aaKnown RBP7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 RIT2Q99578 217 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 PDCD2LQ9BRP1 358 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 LACRTQ9GZZ8 138 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 SEL1LQ9UBV2 794 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 FBXO40Q9UH90 709 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 MYH14Q7Z406 1995 aaKnown RBP7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 CLDN3O15551 220 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 AKAP3O75969 853 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 TUBBP07437 444 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 SNHG28P0DPA3 235 aa7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 RRP1BQ14684 758 aaKnown RBP7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 BRDTQ58F21 947 aaPredicted RBP7.73□□□□□ -1.17
TGFBR3-202ENST00000370399 PDXDC1Q6P996 788 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms