RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 MFSD6Q6ZSS7 791 aa9.82□□□□□ -0.84
HMGB1P39-201ENST00000366304 MRPS27Q92552 414 aaKnown RBP9.82□□□□□ -0.84
HMGB1P39-201ENST00000366304 FTHL17Q9BXU8 183 aa9.82□□□□□ -0.84
HMGB1P39-201ENST00000366304 ENTPD7Q9NQZ7 604 aa9.82□□□□□ -0.84
HMGB1P39-201ENST00000366304 LZTS1Q9Y250 596 aa9.82□□□□□ -0.84
HMGB1P39-201ENST00000366304 TRPV2Q9Y5S1 764 aa9.82□□□□□ -0.84
HMGB1P39-201ENST00000366304 GOLGA8CPA6NN73 597 aa9.81□□□□□ -0.84
HMGB1P39-201ENST00000366304 GCOM1H8Y6P7 765 aaPredicted RBP9.81□□□□□ -0.84
HMGB1P39-201ENST00000366304 ZBTB5O15062 677 aa9.81□□□□□ -0.84
HMGB1P39-201ENST00000366304 FIBPO43427 364 aa9.81□□□□□ -0.84
HMGB1P39-201ENST00000366304 PARP1P09874 1014 aaKnown RBP9.81□□□□□ -0.84
HMGB1P39-201ENST00000366304 POLR2MP0CAP2 368 aa9.81□□□□□ -0.84
HMGB1P39-201ENST00000366304 KCNA2P16389 499 aa9.81□□□□□ -0.84
HMGB1P39-201ENST00000366304 PAK2Q13177 524 aa9.81□□□□□ -0.84
HMGB1P39-201ENST00000366304 PDE12Q6L8Q7 609 aaKnown RBP9.81□□□□□ -0.84
HMGB1P39-201ENST00000366304 RSPH3Q86UC2 560 aa9.81□□□□□ -0.84
HMGB1P39-201ENST00000366304 MRPL43Q8N983 215 aaKnown RBP9.81□□□□□ -0.84
HMGB1P39-201ENST00000366304 TDRD5Q8NAT2 981 aaKnown RBP9.81□□□□□ -0.84
HMGB1P39-201ENST00000366304 SUMF1Q8NBK3 374 aa9.81□□□□□ -0.84
HMGB1P39-201ENST00000366304 NECTIN4Q96NY8 510 aa9.81□□□□□ -0.84
HMGB1P39-201ENST00000366304 ZSCAN10Q96SZ4 725 aaPredicted RBP9.81□□□□□ -0.84
HMGB1P39-201ENST00000366304 ADAM2Q99965 735 aa9.81□□□□□ -0.84
HMGB1P39-201ENST00000366304 CELF4Q9BZC1 486 aaKnown RBP9.81□□□□□ -0.84
HMGB1P39-201ENST00000366304 KAT14Q9H8E8 782 aa9.81□□□□□ -0.84
HMGB1P39-201ENST00000366304 MAP3K20Q9NYL2 800 aaKnown RBP9.81□□□□□ -0.84
HMGB1P39-201ENST00000366304 MAD2L2Q9UI95 211 aa9.81□□□□□ -0.84
HMGB1P39-201ENST00000366304 LRFN2Q9ULH4 789 aa9.81□□□□□ -0.84
HMGB1P39-201ENST00000366304 NOC2LQ9Y3T9 749 aaKnown RBP9.81□□□□□ -0.84
HMGB1P39-201ENST00000366304 PCDHB7Q9Y5E2 793 aa9.81□□□□□ -0.84
HMGB1P39-201ENST00000366304 SQORQ9Y6N5 450 aa9.81□□□□□ -0.84
HMGB1P39-201ENST00000366304 FNDC1Q4ZHG4 1894 aaPredicted RBP9.81□□□□□ -0.84
HMGB1P39-201ENST00000366304 ZMYM6O95789 1325 aa9.81□□□□□ -0.84
HMGB1P39-201ENST00000366304 FSD2A1L4K1 749 aa9.8□□□□□ -0.84
HMGB1P39-201ENST00000366304 B4E1Z4 1266 aa9.8□□□□□ -0.84
HMGB1P39-201ENST00000366304 KLRF2D3W0D1 207 aa9.8□□□□□ -0.84
HMGB1P39-201ENST00000366304 CYTH3O43739 400 aa9.8□□□□□ -0.84
HMGB1P39-201ENST00000366304 N4BP1O75113 896 aaKnown RBP9.8□□□□□ -0.84
HMGB1P39-201ENST00000366304 EOMESO95936 686 aa9.8□□□□□ -0.84
HMGB1P39-201ENST00000366304 SP9P0CG40 484 aa9.8□□□□□ -0.84
HMGB1P39-201ENST00000366304 EPCAMP16422 314 aa9.8□□□□□ -0.84
HMGB1P39-201ENST00000366304 FAM189BP81408 668 aa9.8□□□□□ -0.84
HMGB1P39-201ENST00000366304 ITIH3Q06033 890 aa9.8□□□□□ -0.84
HMGB1P39-201ENST00000366304 NMIQ13287 307 aaPredicted RBP9.8□□□□□ -0.84
HMGB1P39-201ENST00000366304 ST3GAL2Q16842 350 aa9.8□□□□□ -0.84
HMGB1P39-201ENST00000366304 TPRNQ4KMQ1 711 aa9.8□□□□□ -0.84
HMGB1P39-201ENST00000366304 KIAA1841Q6NSI8 718 aa9.8□□□□□ -0.84
HMGB1P39-201ENST00000366304 MAML2Q8IZL2 1156 aaPredicted RBP9.8□□□□□ -0.84
HMGB1P39-201ENST00000366304 RSAD2Q8WXG1 361 aa9.8□□□□□ -0.84
HMGB1P39-201ENST00000366304 AUTS2Q8WXX7 1259 aa9.8□□□□□ -0.84
HMGB1P39-201ENST00000366304 ESR2Q92731 530 aa9.8□□□□□ -0.84
HMGB1P39-201ENST00000366304 CASP10Q92851 521 aa9.8□□□□□ -0.84
HMGB1P39-201ENST00000366304 CASD1Q96PB1 797 aa9.8□□□□□ -0.84
HMGB1P39-201ENST00000366304 PIGSQ96S52 555 aa9.8□□□□□ -0.84
HMGB1P39-201ENST00000366304 SENP7Q9BQF6 1050 aa9.8□□□□□ -0.84
HMGB1P39-201ENST00000366304 KCNK12Q9HB15 430 aa9.8□□□□□ -0.84
HMGB1P39-201ENST00000366304 HELLSQ9NRZ9 838 aa9.8□□□□□ -0.84
HMGB1P39-201ENST00000366304 RGS18Q9NS28 235 aa9.8□□□□□ -0.84
HMGB1P39-201ENST00000366304 DLGAP2Q9P1A6 1054 aa9.8□□□□□ -0.84
HMGB1P39-201ENST00000366304 ZSWIM5Q9P217 1185 aa9.8□□□□□ -0.84
HMGB1P39-201ENST00000366304 ANKRD11Q6UB99 2663 aaPredicted RBP9.8□□□□□ -0.84
HMGB1P39-201ENST00000366304 CEP295Q9C0D2 2601 aa9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 ZFYVE26Q68DK2 2539 aa9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 PALM3A6NDB9 673 aaPredicted RBP9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 CCER2I3L3R5 266 aa9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 DCNP07585 359 aaKnown RBP9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 SRGAP2BP0DMP2 458 aa9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 GLULP15104 373 aa9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 ITGB5P18084 799 aa9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 MTHFRP42898 656 aa9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 ATXN1P54253 815 aaKnown RBP9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 NFX1Q12986 1120 aaKnown RBP9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 TDGQ13569 410 aa9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 DSC3Q14574 896 aa9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 GNPTABQ3T906 1256 aa9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 MCMDC2Q4G0Z9 681 aa9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 IER5Q5VY09 327 aa9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 CES5AQ6NT32 575 aa9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 USP17L6PQ6QN14 398 aa9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 KCNT2Q6UVM3 1135 aa9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 HOMER1Q86YM7 354 aa9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 SLC22A17Q8WUG5 538 aa9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 RUBCNQ92622 972 aa9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 RTP3Q9BQQ7 232 aa9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 SEMA4AQ9H3S1 761 aa9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 SENP2Q9HC62 589 aa9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 NGRNQ9NPE2 291 aaKnown RBP9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 CYP26B1Q9NR63 512 aa9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 ERAP1Q9NZ08 941 aa9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 PKD2L1Q9P0L9 805 aa9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 SEPT9Q9UHD8 586 aaPredicted RBP9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 DUSP12Q9UNI6 340 aa9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 USTQ9Y2C2 406 aa9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 PCDHA2Q9Y5H9 948 aa9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 KDM3AQ9Y4C1 1321 aa9.79□□□□□ -0.84
HMGB1P39-201ENST00000366304 COL4A3Q01955 1670 aa9.78□□□□□ -0.84
HMGB1P39-201ENST00000366304 LRRN2O75325 713 aa9.78□□□□□ -0.84
HMGB1P39-201ENST00000366304 CFHP08603 1231 aa9.78□□□□□ -0.84
HMGB1P39-201ENST00000366304 LAG3P18627 525 aa9.78□□□□□ -0.84
HMGB1P39-201ENST00000366304 MX1P20591 662 aa9.78□□□□□ -0.84
HMGB1P39-201ENST00000366304 KRT76Q01546 638 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms