RNA–Protein interactions for RNA: ENST00000361368.6

SMURF1-202, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF1, Length 5,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-202ENST00000361368 TTC19Q6DKK2 380 aaPredicted RBP21.75■■□□□ 1.07
SMURF1-202ENST00000361368 ALKBH5Q6P6C2 394 aaKnown RBP21.75■■□□□ 1.07
SMURF1-202ENST00000361368 PLEKHF1Q96S99 279 aa21.75■■□□□ 1.07
SMURF1-202ENST00000361368 FMO2Q99518 471 aa21.75■■□□□ 1.07
SMURF1-202ENST00000361368 ANGPTL8Q6UXH0 198 aa21.74■■□□□ 1.07
SMURF1-202ENST00000361368 XXYLT1Q8NBI6 393 aa21.74■■□□□ 1.07
SMURF1-202ENST00000361368 NRBF2Q96F24 287 aa21.74■■□□□ 1.07
SMURF1-202ENST00000361368 FAM20AQ96MK3 541 aa21.74■■□□□ 1.07
SMURF1-202ENST00000361368 PIDD1Q9HB75 910 aa21.74■■□□□ 1.07
SMURF1-202ENST00000361368 ZNF302Q9NR11 478 aa21.74■■□□□ 1.07
SMURF1-202ENST00000361368 CTNND1O60716 968 aaKnown RBP21.74■■□□□ 1.07
SMURF1-202ENST00000361368 HSPA4LO95757 839 aa21.74■■□□□ 1.07
SMURF1-202ENST00000361368 ADCY2Q08462 1091 aa21.74■■□□□ 1.07
SMURF1-202ENST00000361368 ADCY1Q08828 1119 aa21.74■■□□□ 1.07
SMURF1-202ENST00000361368 NUDT18Q6ZVK8 323 aa21.74■■□□□ 1.07
SMURF1-202ENST00000361368 GPT2Q8TD30 523 aa21.74■■□□□ 1.07
SMURF1-202ENST00000361368 CCDC188H7C350 402 aa21.74■■□□□ 1.07
SMURF1-202ENST00000361368 PYGLP06737 847 aa21.74■■□□□ 1.07
SMURF1-202ENST00000361368 PPP6R3Q5H9R7 873 aaPredicted RBP21.74■■□□□ 1.07
SMURF1-202ENST00000361368 SLC27A3Q5K4L6 730 aa21.74■■□□□ 1.07
SMURF1-202ENST00000361368 GRAMD1CQ8IYS0 662 aa21.74■■□□□ 1.07
SMURF1-202ENST00000361368 TTLL11Q8NHH1 800 aa21.74■■□□□ 1.07
SMURF1-202ENST00000361368 USP17L10C9JJH3 530 aa21.74■■□□□ 1.07
SMURF1-202ENST00000361368 CYP2E1P05181 493 aaPredicted RBP21.74■■□□□ 1.07
SMURF1-202ENST00000361368 PYGBP11216 843 aa21.74■■□□□ 1.07
SMURF1-202ENST00000361368 TBXAS1P24557 533 aaPredicted RBP21.74■■□□□ 1.07
SMURF1-202ENST00000361368 TRIP13Q15645 432 aaPredicted RBP21.74■■□□□ 1.07
SMURF1-202ENST00000361368 KYAT1Q16773 422 aa21.74■■□□□ 1.07
SMURF1-202ENST00000361368 FAM182BQ5T319 152 aa21.74■■□□□ 1.07
SMURF1-202ENST00000361368 EDEM3Q9BZQ6 932 aa21.74■■□□□ 1.07
SMURF1-202ENST00000361368 ZMYND12Q9H0C1 365 aa21.74■■□□□ 1.07
SMURF1-202ENST00000361368 TEKT2Q9UIF3 430 aa21.74■■□□□ 1.07
SMURF1-202ENST00000361368 USP6P35125 1406 aa21.74■■□□□ 1.07
SMURF1-202ENST00000361368 ALS2CLQ60I27 953 aa21.74■■□□□ 1.07
SMURF1-202ENST00000361368 PCDHB6Q9Y5E3 794 aa21.74■■□□□ 1.07
SMURF1-202ENST00000361368 TBCCQ15814 346 aa21.73■■□□□ 1.07
SMURF1-202ENST00000361368 RCSD1Q6JBY9 416 aa21.73■■□□□ 1.07
SMURF1-202ENST00000361368 CYP26B1Q9NR63 512 aa21.73■■□□□ 1.07
SMURF1-202ENST00000361368 NDUFA10O95299 355 aa21.73■■□□□ 1.07
SMURF1-202ENST00000361368 RAD51Q06609 339 aa21.73■■□□□ 1.07
SMURF1-202ENST00000361368 C2orf54Q08AI8 447 aa21.73■■□□□ 1.07
SMURF1-202ENST00000361368 PROM2Q8N271 834 aa21.73■■□□□ 1.07
SMURF1-202ENST00000361368 HACD3Q9P035 362 aa21.73■■□□□ 1.07
SMURF1-202ENST00000361368 ANGPTL2Q9UKU9 493 aa21.73■■□□□ 1.07
SMURF1-202ENST00000361368 CYP2D7A0A087X1C5 515 aa21.73■■□□□ 1.07
SMURF1-202ENST00000361368 KPNA7A9QM74 516 aa21.73■■□□□ 1.07
SMURF1-202ENST00000361368 KRT38O76015 456 aa21.73■■□□□ 1.07
SMURF1-202ENST00000361368 PI16Q6UXB8 463 aa21.73■■□□□ 1.07
SMURF1-202ENST00000361368 CRLF3Q8IUI8 442 aa21.73■■□□□ 1.07
SMURF1-202ENST00000361368 TBK1Q9UHD2 729 aa21.73■■□□□ 1.07
SMURF1-202ENST00000361368 ZBBXA8MT70 800 aa21.72■■□□□ 1.07
SMURF1-202ENST00000361368 KRT80Q6KB66 452 aa21.72■■□□□ 1.07
SMURF1-202ENST00000361368 PADI6Q6TGC4 694 aa21.72■■□□□ 1.07
SMURF1-202ENST00000361368 RNF168Q8IYW5 571 aaPredicted RBP21.72■■□□□ 1.07
SMURF1-202ENST00000361368 EXT2Q93063 718 aa21.72■■□□□ 1.07
SMURF1-202ENST00000361368 ECE2O60344 883 aa21.72■■□□□ 1.07
SMURF1-202ENST00000361368 CCT5P48643 541 aa21.72■■□□□ 1.07
SMURF1-202ENST00000361368 LIG3P49916 1009 aa21.72■■□□□ 1.07
SMURF1-202ENST00000361368 KIF19Q2TAC6 998 aa21.72■■□□□ 1.07
SMURF1-202ENST00000361368 VSTM4Q8IW00 320 aa21.72■■□□□ 1.07
SMURF1-202ENST00000361368 SH3RF3Q8TEJ3 882 aaPredicted RBP21.72■■□□□ 1.07
SMURF1-202ENST00000361368 GCOM2Q9BZD3 368 aaPredicted RBP21.72■■□□□ 1.07
SMURF1-202ENST00000361368 RRAGDQ9NQL2 400 aaPredicted RBP21.72■■□□□ 1.07
SMURF1-202ENST00000361368 MB21D1Q8N884 522 aa21.72■■□□□ 1.07
SMURF1-202ENST00000361368 RAVER2Q9HCJ3 691 aaKnown RBP21.72■■□□□ 1.07
SMURF1-202ENST00000361368 NARFQ9UHQ1 456 aa21.72■■□□□ 1.07
SMURF1-202ENST00000361368 DNAJC12Q9UKB3 198 aa21.72■■□□□ 1.07
SMURF1-202ENST00000361368 CDC25AP30304 524 aa21.72■■□□□ 1.07
SMURF1-202ENST00000361368 IFT88Q13099 833 aa21.72■■□□□ 1.07
SMURF1-202ENST00000361368 UGGT1Q9NYU2 1555 aa21.72■■□□□ 1.07
SMURF1-202ENST00000361368 ARAP3Q8WWN8 1544 aa21.72■■□□□ 1.07
SMURF1-202ENST00000361368 KLHL29Q96CT2 875 aa21.72■■□□□ 1.07
SMURF1-202ENST00000361368 MMP19Q99542 508 aa21.72■■□□□ 1.07
SMURF1-202ENST00000361368 SYNGAP1Q96PV0 1343 aa21.71■■□□□ 1.07
SMURF1-202ENST00000361368 SAMD9Q5K651 1589 aa21.71■■□□□ 1.07
SMURF1-202ENST00000361368 LZICQ8WZA0 190 aa21.71■■□□□ 1.07
SMURF1-202ENST00000361368 RNF146Q9NTX7 359 aa21.71■■□□□ 1.07
SMURF1-202ENST00000361368 TRAIPQ9BWF2 469 aa21.71■■□□□ 1.07
SMURF1-202ENST00000361368 KCNQ4P56696 695 aa21.71■■□□□ 1.07
SMURF1-202ENST00000361368 SNAP25P60880 206 aa21.71■■□□□ 1.07
SMURF1-202ENST00000361368 NSUN2Q08J23 767 aaKnown RBP eCLIP21.71■■□□□ 1.07
SMURF1-202ENST00000361368 HINFPQ9BQA5 517 aa21.71■■□□□ 1.07
SMURF1-202ENST00000361368 SAMSN1Q9NSI8 373 aaKnown RBP21.71■■□□□ 1.07
SMURF1-202ENST00000361368 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.71■■□□□ 1.07
SMURF1-202ENST00000361368 PTCH1Q13635 1447 aa21.71■■□□□ 1.07
SMURF1-202ENST00000361368 KIF21AQ7Z4S6 1674 aa21.71■■□□□ 1.07
SMURF1-202ENST00000361368 SDC4P31431 198 aa21.71■■□□□ 1.07
SMURF1-202ENST00000361368 CNOT8Q9UFF9 292 aaKnown RBP21.71■■□□□ 1.07
SMURF1-202ENST00000361368 UBE4BO95155 1302 aa21.71■■□□□ 1.07
SMURF1-202ENST00000361368 H7C1W4 665 aa21.7■■□□□ 1.06
SMURF1-202ENST00000361368 EEF1B2P24534 225 aaKnown RBP21.7■■□□□ 1.06
SMURF1-202ENST00000361368 GCKP35557 465 aa21.7■■□□□ 1.06
SMURF1-202ENST00000361368 VEPH1Q14D04 833 aa21.7■■□□□ 1.06
SMURF1-202ENST00000361368 WDR75Q8IWA0 830 aaKnown RBP21.7■■□□□ 1.06
SMURF1-202ENST00000361368 KIFC3Q9BVG8 833 aa21.7■■□□□ 1.06
SMURF1-202ENST00000361368 CCDC151A5D8V7 595 aa21.7■■□□□ 1.06
SMURF1-202ENST00000361368 CFLARO15519 480 aa21.7■■□□□ 1.06
SMURF1-202ENST00000361368 ESRRAP11474 423 aaPredicted RBP21.7■■□□□ 1.06
SMURF1-202ENST00000361368 CAV1Q03135 178 aa21.7■■□□□ 1.06
SMURF1-202ENST00000361368 ACRBPQ8NEB7 543 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms