RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 OLFML3Q9NRN5 406 aa11.88□□□□□ -0.51
TRAPPC4-201ENST00000359005 SAMSN1Q9NSI8 373 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-201ENST00000359005 LARSQ9P2J5 1176 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-201ENST00000359005 PCDHB13Q9Y5F0 798 aa11.88□□□□□ -0.51
TRAPPC4-201ENST00000359005 ITIH6Q6UXX5 1313 aa11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 DNAJC25-GNG10A0A024R161 153 aa11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 ASB14A6NK59 587 aa11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 H0YCG3 227 aa11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 EIF3DO15371 548 aaKnown RBP eCLIP11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 SNAI1O95863 264 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 TUBB4AP04350 444 aa11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 ZNF865P0CJ78 1059 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 MAPTP10636 758 aaKnown RBP11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 SYN1P17600 705 aa11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 PTGS1P23219 599 aa11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 GUCY2CP25092 1073 aa11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 ICAM3P32942 547 aa11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 MTIF2P46199 727 aaKnown RBP11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 KCNJ6P48051 423 aa11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 IRX5P78411 483 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 EHHADHQ08426 723 aa11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 GIT2Q14161 759 aa11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 CTTNQ14247 550 aaKnown RBP11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 ECM1Q16610 540 aa11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 EDRF1Q3B7T1 1238 aa11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 GJC2Q5T442 439 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 CREBRFQ8IUR6 639 aa11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 GJA10Q969M2 543 aa11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 NAA15Q9BXJ9 866 aaKnown RBP11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 HSD3B7Q9H2F3 369 aa11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 MRPL44Q9H9J2 332 aaKnown RBP11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 JPH1Q9HDC5 661 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 SLC5A4Q9NY91 659 aa11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 CGNQ9P2M7 1197 aaKnown RBP11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 SLC9A2Q9UBY0 812 aa11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 MAPK8IP1Q9UQF2 711 aa11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 PPME1Q9Y570 386 aa11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 NR2E3Q9Y5X4 410 aa11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 LAMA2P24043 3122 aaKnown RBP11.87□□□□□ -0.51
TRAPPC4-201ENST00000359005 A0A1W2PQC6 194 aa11.86□□□□□ -0.51
TRAPPC4-201ENST00000359005 SPATA31C2B4DYI2 1134 aa11.86□□□□□ -0.51
TRAPPC4-201ENST00000359005 DDX39AO00148 427 aaKnown RBP11.86□□□□□ -0.51
TRAPPC4-201ENST00000359005 EML1O00423 815 aa11.86□□□□□ -0.51
TRAPPC4-201ENST00000359005 PES1O00541 588 aaKnown RBP11.86□□□□□ -0.51
TRAPPC4-201ENST00000359005 CETN3O15182 167 aa11.86□□□□□ -0.51
TRAPPC4-201ENST00000359005 DHX15O43143 795 aaKnown RBP11.86□□□□□ -0.51
TRAPPC4-201ENST00000359005 CAPN2P17655 700 aa11.86□□□□□ -0.51
TRAPPC4-201ENST00000359005 ALDH5A1P51649 535 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC4-201ENST00000359005 COPB1P53618 953 aaKnown RBP11.86□□□□□ -0.51
TRAPPC4-201ENST00000359005 ATN1P54259 1190 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC4-201ENST00000359005 FAM160B1Q5W0V3 765 aa11.86□□□□□ -0.51
TRAPPC4-201ENST00000359005 RINT1Q6NUQ1 792 aa11.86□□□□□ -0.51
TRAPPC4-201ENST00000359005 TTI2Q6NXR4 508 aa11.86□□□□□ -0.51
TRAPPC4-201ENST00000359005 KCNK18Q7Z418 384 aa11.86□□□□□ -0.51
TRAPPC4-201ENST00000359005 RETREG2Q8NC44 543 aa11.86□□□□□ -0.51
TRAPPC4-201ENST00000359005 ZNF397Q8NF99 534 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC4-201ENST00000359005 IL31RAQ8NI17 732 aa11.86□□□□□ -0.51
TRAPPC4-201ENST00000359005 PURBQ96QR8 312 aaKnown RBP11.86□□□□□ -0.51
TRAPPC4-201ENST00000359005 REEP2Q9BRK0 252 aa11.86□□□□□ -0.51
TRAPPC4-201ENST00000359005 TINF2Q9BSI4 451 aa11.86□□□□□ -0.51
TRAPPC4-201ENST00000359005 SENP6Q9GZR1 1112 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC4-201ENST00000359005 C17orf75Q9HAS0 396 aa11.86□□□□□ -0.51
TRAPPC4-201ENST00000359005 RTN4Q9NQC3 1192 aaKnown RBP11.86□□□□□ -0.51
TRAPPC4-201ENST00000359005 RGL1Q9NZL6 768 aa11.86□□□□□ -0.51
TRAPPC4-201ENST00000359005 PDXKO00764 312 aa11.85□□□□□ -0.51
TRAPPC4-201ENST00000359005 SEPT4O43236 478 aa11.85□□□□□ -0.51
TRAPPC4-201ENST00000359005 ADCY6O43306 1168 aa11.85□□□□□ -0.51
TRAPPC4-201ENST00000359005 SKILP12757 684 aa11.85□□□□□ -0.51
TRAPPC4-201ENST00000359005 YWHABP31946 246 aaKnown RBP11.85□□□□□ -0.51
TRAPPC4-201ENST00000359005 SMTNP53814 917 aa11.85□□□□□ -0.51
TRAPPC4-201ENST00000359005 SNRPFP62306 86 aaKnown RBP11.85□□□□□ -0.51
TRAPPC4-201ENST00000359005 CNTN2Q02246 1040 aa11.85□□□□□ -0.51
TRAPPC4-201ENST00000359005 UBXN1Q04323 297 aa11.85□□□□□ -0.51
TRAPPC4-201ENST00000359005 KRT31Q15323 416 aa11.85□□□□□ -0.51
TRAPPC4-201ENST00000359005 ANKRD40Q6AI12 368 aa11.85□□□□□ -0.51
TRAPPC4-201ENST00000359005 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC4-201ENST00000359005 HS2ST1Q7LGA3 356 aa11.85□□□□□ -0.51
TRAPPC4-201ENST00000359005 FAM178BQ8IXR5 827 aa11.85□□□□□ -0.51
TRAPPC4-201ENST00000359005 MYCT1Q8N699 235 aa11.85□□□□□ -0.51
TRAPPC4-201ENST00000359005 KIAA0895Q8NCT3 520 aa11.85□□□□□ -0.51
TRAPPC4-201ENST00000359005 LRRC15Q8TF66 581 aa11.85□□□□□ -0.51
TRAPPC4-201ENST00000359005 GDF15Q99988 308 aa11.85□□□□□ -0.51
TRAPPC4-201ENST00000359005 TMEM206Q9H813 350 aa11.85□□□□□ -0.51
TRAPPC4-201ENST00000359005 METTL14Q9HCE5 456 aaKnown RBP11.85□□□□□ -0.51
TRAPPC4-201ENST00000359005 PKD2L1Q9P0L9 805 aa11.85□□□□□ -0.51
TRAPPC4-201ENST00000359005 FAM184BQ9ULE4 1060 aa11.85□□□□□ -0.51
TRAPPC4-201ENST00000359005 ASTN1O14525 1302 aa11.85□□□□□ -0.51
TRAPPC4-201ENST00000359005 GOLGA6L9A6NEM1 432 aa11.84□□□□□ -0.51
TRAPPC4-201ENST00000359005 AKR1B15C9JRZ8 316 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC4-201ENST00000359005 KIF2AO00139 706 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC4-201ENST00000359005 SOX1O00570 391 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC4-201ENST00000359005 ITGB3BPQ13352 177 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC4-201ENST00000359005 KNOP1Q1ED39 458 aaKnown RBP11.84□□□□□ -0.51
TRAPPC4-201ENST00000359005 BMT2Q1RMZ1 405 aa11.84□□□□□ -0.51
TRAPPC4-201ENST00000359005 CCDC40Q4G0X9 1142 aa11.84□□□□□ -0.51
TRAPPC4-201ENST00000359005 ARSHQ5FYA8 562 aa11.84□□□□□ -0.51
TRAPPC4-201ENST00000359005 PADI6Q6TGC4 694 aa11.84□□□□□ -0.51
TRAPPC4-201ENST00000359005 C1orf186Q6ZWK4 172 aa11.84□□□□□ -0.51
TRAPPC4-201ENST00000359005 FAM133AQ8N9E0 248 aa11.84□□□□□ -0.51
TRAPPC4-201ENST00000359005 BANK1Q8NDB2 785 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms