RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 CHST13Q8NET6 341 aa13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 TRIM58Q8NG06 486 aa13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 SECISBP2LQ93073 1101 aaKnown RBP13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 TUBGCP2Q9BSJ2 902 aa13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 EHMT1Q9H9B1 1298 aa13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 MAGEC2Q9UBF1 373 aaPredicted RBP13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 KIAA1217Q5T5P2 1943 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 TESPA1A2RU30 521 aaPredicted RBP13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 B4DLN1 442 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 LAD1O00515 517 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 ZNF263O14978 683 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 MSH4O15457 936 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 ARP10275 920 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 IDEP14735 1019 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 GCFC2P16383 781 aaKnown RBP13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 MRPS9P82933 396 aaKnown RBP13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 C2orf54Q08AI8 447 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 TKFCQ3LXA3 575 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 COBLL1Q53SF7 1204 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 CCDC70Q6NSX1 233 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 GSPT2Q8IYD1 628 aaKnown RBP13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 GPRC5AQ8NFJ5 357 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 CAVIN3Q969G5 261 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 PDCD2LQ9BRP1 358 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 PCDHA12Q9UN75 941 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 IGLV3-22A0A075B6J6 115 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 CYP3A7-CYP3A51PA0A087WV96 503 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 DDX39AO00148 427 aaKnown RBP13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 AOC2O75106 756 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 ITGB5P18084 799 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 CYP3A7P24462 503 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 CCNE1P24864 410 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 KIF5AQ12840 1032 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 TAF1CQ15572 869 aaPredicted RBP13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 CEP55Q53EZ4 464 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 MIIPQ5JXC2 388 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 EMC10Q5UCC4 262 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 ALS2CLQ60I27 953 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 CAGE1Q8TC20 777 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 TRIM47Q96LD4 638 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 PARK7Q99497 189 aaKnown RBP13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 CAPS2Q9BXY5 557 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 MAGEF1Q9HAY2 307 aa13.9□□□□□ -0.18
RTFDC1-202ENST00000357348 MCM3APO60318 1980 aa13.89□□□□□ -0.19
RTFDC1-202ENST00000357348 DOCK3Q8IZD9 2030 aa13.89□□□□□ -0.19
RTFDC1-202ENST00000357348 DOCK5Q9H7D0 1870 aa13.89□□□□□ -0.19
RTFDC1-202ENST00000357348 MANSC4A6NHS7 340 aaPredicted RBP13.89□□□□□ -0.19
RTFDC1-202ENST00000357348 ANKRD65E5RJM6 399 aa13.89□□□□□ -0.19
RTFDC1-202ENST00000357348 CHMP2AO43633 222 aa13.89□□□□□ -0.19
RTFDC1-202ENST00000357348 OPA1O60313 960 aa13.89□□□□□ -0.19
RTFDC1-202ENST00000357348 SORBS3O60504 671 aa13.89□□□□□ -0.19
RTFDC1-202ENST00000357348 IPO7O95373 1038 aaKnown RBP13.89□□□□□ -0.19
RTFDC1-202ENST00000357348 CYP3A4P08684 503 aa13.89□□□□□ -0.19
RTFDC1-202ENST00000357348 PRPHP41219 470 aa13.89□□□□□ -0.19
RTFDC1-202ENST00000357348 UBA7P41226 1012 aa13.89□□□□□ -0.19
RTFDC1-202ENST00000357348 PPP1R2P41236 205 aa13.89□□□□□ -0.19
RTFDC1-202ENST00000357348 EPHB4P54760 987 aa13.89□□□□□ -0.19
RTFDC1-202ENST00000357348 NNTQ13423 1086 aa13.89□□□□□ -0.19
RTFDC1-202ENST00000357348 EMBQ6PCB8 327 aa13.89□□□□□ -0.19
RTFDC1-202ENST00000357348 NUDT12Q9BQG2 462 aa13.89□□□□□ -0.19
RTFDC1-202ENST00000357348 CUEDC2Q9H467 287 aa13.89□□□□□ -0.19
RTFDC1-202ENST00000357348 GEMIN8Q9NWZ8 242 aaKnown RBP13.89□□□□□ -0.19
RTFDC1-202ENST00000357348 LRWD1Q9UFC0 647 aa13.89□□□□□ -0.19
RTFDC1-202ENST00000357348 DUSP10Q9Y6W6 482 aa13.89□□□□□ -0.19
RTFDC1-202ENST00000357348 ASTN1O14525 1302 aa13.89□□□□□ -0.19
RTFDC1-202ENST00000357348 EBAG9O00559 213 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 NR3C2P08235 984 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 CIITAP33076 1130 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 GHRHRQ02643 423 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 TBC1D8BQ0IIM8 1120 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 TMEM266Q2M3C6 531 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 Q4G0T1 1027 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 SND1Q7KZF4 910 aaKnown RBP eCLIP13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 EEPD1Q7L9B9 569 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 FAM114A1Q8IWE2 563 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 SPATA4Q8NEY3 305 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 ETNPPLQ8TBG4 499 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 GDAP1L1Q96MZ0 367 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 CEP89Q96ST8 783 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 MMP19Q99542 508 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 NAP1L4Q99733 375 aaKnown RBP13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 KCNMB3Q9NPA1 279 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 MAP3K20Q9NYL2 800 aaKnown RBP13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 FBXO40Q9UH90 709 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 DMGDHQ9UI17 866 aaKnown RBP13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 PLAGL2Q9UPG8 496 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 FAM169AQ9Y6X4 670 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 RPTORQ8N122 1335 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 BICDL2A1A5D9 508 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 TACC1O75410 805 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 SLC25A27O95847 323 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 TCP1P17987 556 aaKnown RBP13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 TRIM21P19474 475 aaKnown RBP13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 CCT5P48643 541 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 KCTD2Q14681 263 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 IFNL1Q8IU54 200 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 NSUN6Q8TEA1 469 aaKnown RBP13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 P2RX5Q93086 422 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 MBOAT7Q96N66 472 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 MXRA8Q9BRK3 442 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms