RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 CC2D2BQ6DHV5 1058 aa15.2■□□□□ 0.02
SREBF1-202ENST00000355815 GUF1Q8N442 669 aaKnown RBP15.2■□□□□ 0.02
SREBF1-202ENST00000355815 MMEP08473 750 aa15.2■□□□□ 0.02
SREBF1-202ENST00000355815 GYS1P13807 737 aa15.2■□□□□ 0.02
SREBF1-202ENST00000355815 MSH2P43246 934 aa15.2■□□□□ 0.02
SREBF1-202ENST00000355815 TBX2Q13207 712 aaPredicted RBP15.2■□□□□ 0.02
SREBF1-202ENST00000355815 MAP7Q14244 749 aa15.2■□□□□ 0.02
SREBF1-202ENST00000355815 PDCD7Q8N8D1 485 aaKnown RBP15.2■□□□□ 0.02
SREBF1-202ENST00000355815 GINS2Q9Y248 185 aa15.2■□□□□ 0.02
SREBF1-202ENST00000355815 DAAM1Q9Y4D1 1078 aa15.2■□□□□ 0.02
SREBF1-202ENST00000355815 EVI5O60447 810 aa15.2■□□□□ 0.02
SREBF1-202ENST00000355815 DIAPH2O60879 1101 aa15.2■□□□□ 0.02
SREBF1-202ENST00000355815 GNA14O95837 355 aa15.2■□□□□ 0.02
SREBF1-202ENST00000355815 SCP2P22307 547 aa15.2■□□□□ 0.02
SREBF1-202ENST00000355815 TRIP13Q15645 432 aaPredicted RBP15.2■□□□□ 0.02
SREBF1-202ENST00000355815 ZC2HC1CQ53FD0 456 aaPredicted RBP15.2■□□□□ 0.02
SREBF1-202ENST00000355815 CYP2W1Q8TAV3 490 aa15.2■□□□□ 0.02
SREBF1-202ENST00000355815 DYDC2Q96IM9 177 aa15.2■□□□□ 0.02
SREBF1-202ENST00000355815 OSBPL9Q96SU4 736 aa15.2■□□□□ 0.02
SREBF1-202ENST00000355815 GMNCA6NCL1 334 aa15.19■□□□□ 0.02
SREBF1-202ENST00000355815 ECE2O60344 883 aa15.19■□□□□ 0.02
SREBF1-202ENST00000355815 ACSL3O95573 720 aa15.19■□□□□ 0.02
SREBF1-202ENST00000355815 ZNF211Q13398 564 aaPredicted RBP15.19■□□□□ 0.02
SREBF1-202ENST00000355815 TMED1Q13445 227 aa15.19■□□□□ 0.02
SREBF1-202ENST00000355815 PPP2R5DQ14738 602 aa15.19■□□□□ 0.02
SREBF1-202ENST00000355815 CLUL1Q15846 466 aa15.19■□□□□ 0.02
SREBF1-202ENST00000355815 GJB7Q6PEY0 223 aa15.19■□□□□ 0.02
SREBF1-202ENST00000355815 HIPK4Q8NE63 616 aa15.19■□□□□ 0.02
SREBF1-202ENST00000355815 OR2W6PQ8NHA6 318 aa15.19■□□□□ 0.02
SREBF1-202ENST00000355815 KBTBD4Q9NVX7 518 aa15.19■□□□□ 0.02
SREBF1-202ENST00000355815 CAPN6Q9Y6Q1 641 aa15.19■□□□□ 0.02
SREBF1-202ENST00000355815 RSPH10B2B2RC85 870 aa15.19■□□□□ 0.02
SREBF1-202ENST00000355815 RSPH10BP0C881 870 aa15.19■□□□□ 0.02
SREBF1-202ENST00000355815 GCFC2P16383 781 aaKnown RBP15.19■□□□□ 0.02
SREBF1-202ENST00000355815 ATP2A2P16615 1042 aaKnown RBP15.19■□□□□ 0.02
SREBF1-202ENST00000355815 DESP17661 470 aa15.19■□□□□ 0.02
SREBF1-202ENST00000355815 CEP120Q8N960 986 aa15.19■□□□□ 0.02
SREBF1-202ENST00000355815 SLC4A7Q9Y6M7 1214 aa15.19■□□□□ 0.02
SREBF1-202ENST00000355815 NALCNQ8IZF0 1738 aa15.19■□□□□ 0.02
SREBF1-202ENST00000355815 NPR1P16066 1061 aa15.19■□□□□ 0.02
SREBF1-202ENST00000355815 NAALADL2Q58DX5 795 aa15.19■□□□□ 0.02
SREBF1-202ENST00000355815 ZC3H18Q86VM9 953 aaKnown RBP15.19■□□□□ 0.02
SREBF1-202ENST00000355815 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.19■□□□□ 0.025e-8■■□□□ 12.5
SREBF1-202ENST00000355815 FNBP1Q96RU3 617 aa15.19■□□□□ 0.02
SREBF1-202ENST00000355815 CCT8L2Q96SF2 557 aa15.19■□□□□ 0.02
SREBF1-202ENST00000355815 DDX47Q9H0S4 455 aaKnown RBP15.19■□□□□ 0.02
SREBF1-202ENST00000355815 PVALEFA0A1B0GWK0 134 aa15.18■□□□□ 0.02
SREBF1-202ENST00000355815 NDUFB10O96000 172 aa15.18■□□□□ 0.02
SREBF1-202ENST00000355815 TMOD1P28289 359 aa15.18■□□□□ 0.02
SREBF1-202ENST00000355815 TRAF1Q13077 416 aa15.18■□□□□ 0.02
SREBF1-202ENST00000355815 NT5DC1Q5TFE4 455 aa15.18■□□□□ 0.02
SREBF1-202ENST00000355815 NAIF1Q69YI7 327 aaPredicted RBP15.18■□□□□ 0.02
SREBF1-202ENST00000355815 AMIGO3Q86WK7 504 aa15.18■□□□□ 0.02
SREBF1-202ENST00000355815 SPATA4Q8NEY3 305 aa15.18■□□□□ 0.02
SREBF1-202ENST00000355815 SETD1AO15047 1707 aaKnown RBP15.18■□□□□ 0.02
SREBF1-202ENST00000355815 PHF20L1A8MW92 1017 aa15.18■□□□□ 0.02
SREBF1-202ENST00000355815 TROVE2P10155 538 aaKnown RBP eCLIP15.18■□□□□ 0.024e-6■□□□□ 9.4
SREBF1-202ENST00000355815 TNNI1P19237 187 aa15.18■□□□□ 0.02
SREBF1-202ENST00000355815 RFX8Q6ZV50 586 aa15.18■□□□□ 0.02
SREBF1-202ENST00000355815 SHISA4Q96DD7 197 aa15.18■□□□□ 0.02
SREBF1-202ENST00000355815 LARSQ9P2J5 1176 aaKnown RBP15.18■□□□□ 0.02
SREBF1-202ENST00000355815 G3BP2Q9UN86 482 aaKnown RBP15.18■□□□□ 0.02
SREBF1-202ENST00000355815 SNX24Q9Y343 169 aa15.18■□□□□ 0.02
SREBF1-202ENST00000355815 PPP1R37O75864 691 aa15.18■□□□□ 0.02
SREBF1-202ENST00000355815 SERPING1P05155 500 aa15.18■□□□□ 0.02
SREBF1-202ENST00000355815 SETSIPP0DME0 302 aa15.18■□□□□ 0.02
SREBF1-202ENST00000355815 RC3H1Q5TC82 1133 aaKnown RBP15.18■□□□□ 0.02
SREBF1-202ENST00000355815 KIAA0895Q8NCT3 520 aa15.18■□□□□ 0.02
SREBF1-202ENST00000355815 CCDC110Q8TBZ0 833 aa15.18■□□□□ 0.02
SREBF1-202ENST00000355815 OSBPL1AQ9BXW6 950 aa15.18■□□□□ 0.02
SREBF1-202ENST00000355815 UBE2TQ9NPD8 197 aaPredicted RBP15.18■□□□□ 0.02
SREBF1-202ENST00000355815 ZNF277Q9NRM2 450 aaPredicted RBP15.18■□□□□ 0.02
SREBF1-202ENST00000355815 FBXO28Q9NVF7 368 aa15.18■□□□□ 0.02
SREBF1-202ENST00000355815 TXNDC16Q9P2K2 825 aa15.18■□□□□ 0.02
SREBF1-202ENST00000355815 SCOCQ9UIL1 159 aa15.18■□□□□ 0.02
SREBF1-202ENST00000355815 FAF1Q9UNN5 650 aaPredicted RBP15.18■□□□□ 0.02
SREBF1-202ENST00000355815 A0A1W2PQC6 194 aa15.17■□□□□ 0.02
SREBF1-202ENST00000355815 MYBP10242 640 aa15.17■□□□□ 0.02
SREBF1-202ENST00000355815 PSMD2Q13200 908 aa15.17■□□□□ 0.02
SREBF1-202ENST00000355815 VPS72Q15906 364 aa15.17■□□□□ 0.02
SREBF1-202ENST00000355815 MAP7D1Q3KQU3 841 aa15.17■□□□□ 0.02
SREBF1-202ENST00000355815 SYCE1Q8N0S2 351 aa15.17■□□□□ 0.02
SREBF1-202ENST00000355815 C7orf25Q9BPX7 421 aa15.17■□□□□ 0.02
SREBF1-202ENST00000355815 NUCKS1Q9H1E3 243 aaKnown RBP15.17■□□□□ 0.02
SREBF1-202ENST00000355815 EHD4Q9H223 541 aa15.17■□□□□ 0.02
SREBF1-202ENST00000355815 HMGB1P1B2RPK0 211 aaPredicted RBP15.17■□□□□ 0.02
SREBF1-202ENST00000355815 PPP4CP60510 307 aa15.17■□□□□ 0.02
SREBF1-202ENST00000355815 GLYCTKQ8IVS8 523 aa15.17■□□□□ 0.02
SREBF1-202ENST00000355815 DUSP9Q99956 384 aaKnown RBP15.17■□□□□ 0.02
SREBF1-202ENST00000355815 DHX36Q9H2U1 1008 aaKnown RBP15.17■□□□□ 0.02
SREBF1-202ENST00000355815 DDTLA6NHG4 134 aaPredicted RBP15.17■□□□□ 0.02
SREBF1-202ENST00000355815 KIF3CO14782 793 aa15.17■□□□□ 0.02
SREBF1-202ENST00000355815 FOSP01100 380 aaPredicted RBP15.17■□□□□ 0.02
SREBF1-202ENST00000355815 NR3C1P04150 777 aa15.17■□□□□ 0.02
SREBF1-202ENST00000355815 GCLMP48507 274 aa15.17■□□□□ 0.02
SREBF1-202ENST00000355815 PSMC6P62333 389 aa15.17■□□□□ 0.02
SREBF1-202ENST00000355815 PPP4R3AQ6IN85 833 aa15.17■□□□□ 0.02
SREBF1-202ENST00000355815 EEPD1Q7L9B9 569 aa15.17■□□□□ 0.02
SREBF1-202ENST00000355815 SH3RF1Q7Z6J0 888 aa15.17■□□□□ 0.02
SREBF1-202ENST00000355815 ARHGAP24Q8N264 748 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms