RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 RNF181Q9P0P0 153 aa19.34■□□□□ 0.69
COL18A1-202ENST00000355480 SYNMO15061 1565 aa19.34■□□□□ 0.69
COL18A1-202ENST00000355480 SPATA31A3Q5VYP0 1347 aa19.34■□□□□ 0.69
COL18A1-202ENST00000355480 SLC16A4O15374 487 aa19.33■□□□□ 0.69
COL18A1-202ENST00000355480 TJP3O95049 919 aa19.33■□□□□ 0.69
COL18A1-202ENST00000355480 PANX2Q96RD6 677 aa19.33■□□□□ 0.69
COL18A1-202ENST00000355480 TTLL4Q14679 1199 aa19.33■□□□□ 0.69
COL18A1-202ENST00000355480 SLFNL1Q499Z3 407 aa19.33■□□□□ 0.69
COL18A1-202ENST00000355480 XXYLT1Q8NBI6 393 aa19.33■□□□□ 0.69
COL18A1-202ENST00000355480 SLC44A5Q8NCS7 719 aa19.33■□□□□ 0.69
COL18A1-202ENST00000355480 FMO2Q99518 471 aa19.33■□□□□ 0.69
COL18A1-202ENST00000355480 FAM213AQ9BRX8 229 aa19.33■□□□□ 0.69
COL18A1-202ENST00000355480 PPFIA2O75334 1257 aa19.33■□□□□ 0.69
COL18A1-202ENST00000355480 SPP2Q13103 211 aa19.33■□□□□ 0.69
COL18A1-202ENST00000355480 BEST2Q8NFU1 509 aa19.33■□□□□ 0.69
COL18A1-202ENST00000355480 CELF1Q92879 486 aaKnown RBP19.33■□□□□ 0.69
COL18A1-202ENST00000355480 DYDC2Q96IM9 177 aa19.33■□□□□ 0.69
COL18A1-202ENST00000355480 PPP1R9AQ9ULJ8 1098 aa19.33■□□□□ 0.69
COL18A1-202ENST00000355480 GPC3P51654 580 aa19.33■□□□□ 0.68
COL18A1-202ENST00000355480 APOBEC3FQ8IUX4 373 aaKnown RBP19.33■□□□□ 0.68
COL18A1-202ENST00000355480 TMEM35BQ8NCS4 154 aa19.33■□□□□ 0.68
COL18A1-202ENST00000355480 KLC2Q9H0B6 622 aa19.33■□□□□ 0.68
COL18A1-202ENST00000355480 ANAPC7Q9UJX3 599 aa19.33■□□□□ 0.68
COL18A1-202ENST00000355480 IQANK1A0A1B0GTG1 560 aa19.33■□□□□ 0.68
COL18A1-202ENST00000355480 NMT2O60551 498 aa19.33■□□□□ 0.68
COL18A1-202ENST00000355480 HSPA8P11142 646 aaKnown RBP19.33■□□□□ 0.68
COL18A1-202ENST00000355480 NCF2P19878 526 aaPredicted RBP19.33■□□□□ 0.68
COL18A1-202ENST00000355480 PASD1Q8IV76 773 aa19.33■□□□□ 0.68
COL18A1-202ENST00000355480 UBE2Q2Q8WVN8 375 aa19.33■□□□□ 0.68
COL18A1-202ENST00000355480 CEP95Q96GE4 821 aa19.33■□□□□ 0.68
COL18A1-202ENST00000355480 MRPL46Q9H2W6 279 aaKnown RBP19.33■□□□□ 0.68
COL18A1-202ENST00000355480 PAMP19021 973 aa19.32■□□□□ 0.68
COL18A1-202ENST00000355480 GCLMP48507 274 aa19.32■□□□□ 0.68
COL18A1-202ENST00000355480 EPHA10Q5JZY3 1008 aa19.32■□□□□ 0.68
COL18A1-202ENST00000355480 RHPN2Q8IUC4 686 aa19.32■□□□□ 0.68
COL18A1-202ENST00000355480 KLHL8Q9P2G9 620 aaPredicted RBP19.32■□□□□ 0.68
COL18A1-202ENST00000355480 CDK12Q9NYV4 1490 aaPredicted RBP19.32■□□□□ 0.68
COL18A1-202ENST00000355480 NR3C1P04150 777 aa19.32■□□□□ 0.68
COL18A1-202ENST00000355480 RESP18Q5W5W9 173 aa19.32■□□□□ 0.68
COL18A1-202ENST00000355480 PDCD7Q8N8D1 485 aaKnown RBP19.32■□□□□ 0.68
COL18A1-202ENST00000355480 URGCPQ8TCY9 931 aa19.32■□□□□ 0.68
COL18A1-202ENST00000355480 EFHD1Q9BUP0 239 aa19.32■□□□□ 0.68
COL18A1-202ENST00000355480 CNOT8Q9UFF9 292 aaKnown RBP19.32■□□□□ 0.68
COL18A1-202ENST00000355480 E9PMD0 336 aa19.32■□□□□ 0.68
COL18A1-202ENST00000355480 ART3Q13508 389 aa19.32■□□□□ 0.68
COL18A1-202ENST00000355480 OTUD5Q96G74 571 aa19.32■□□□□ 0.68
COL18A1-202ENST00000355480 SLC13A4Q9UKG4 626 aa19.32■□□□□ 0.68
COL18A1-202ENST00000355480 MROH7-TTC4A0A0A0MT08 1334 aa19.32■□□□□ 0.68
COL18A1-202ENST00000355480 DPYSL4O14531 572 aa19.32■□□□□ 0.68
COL18A1-202ENST00000355480 FGGP02679 453 aa19.32■□□□□ 0.68
COL18A1-202ENST00000355480 SLC7A5Q01650 507 aa19.32■□□□□ 0.68
COL18A1-202ENST00000355480 TMEM270Q6UE05 265 aa19.32■□□□□ 0.68
COL18A1-202ENST00000355480 ZMYND12Q9H0C1 365 aa19.32■□□□□ 0.68
COL18A1-202ENST00000355480 SNCBQ16143 134 aa19.31■□□□□ 0.68
COL18A1-202ENST00000355480 SIRT2Q8IXJ6 389 aa19.31■□□□□ 0.68
COL18A1-202ENST00000355480 PDCD6IPQ8WUM4 868 aaKnown RBP19.31■□□□□ 0.68
COL18A1-202ENST00000355480 MMP19Q99542 508 aa19.31■□□□□ 0.68
COL18A1-202ENST00000355480 SUCLA2Q9P2R7 463 aaPredicted RBP19.31■□□□□ 0.68
COL18A1-202ENST00000355480 RAD54LQ92698 747 aa19.31■□□□□ 0.68
COL18A1-202ENST00000355480 MMTAG2Q9BU76 263 aaKnown RBP19.31■□□□□ 0.68
COL18A1-202ENST00000355480 GJB4Q9NTQ9 266 aa19.31■□□□□ 0.68
COL18A1-202ENST00000355480 OCRLQ01968 901 aa19.31■□□□□ 0.68
COL18A1-202ENST00000355480 TAF1BQ53T94 588 aaPredicted RBP19.31■□□□□ 0.68
COL18A1-202ENST00000355480 SWSAP1Q6NVH7 229 aa19.31■□□□□ 0.68
COL18A1-202ENST00000355480 TMED8Q6PL24 325 aaPredicted RBP19.31■□□□□ 0.68
COL18A1-202ENST00000355480 NOVA2Q9UNW9 492 aaKnown RBP19.31■□□□□ 0.68
COL18A1-202ENST00000355480 ZBBXA8MT70 800 aa19.31■□□□□ 0.68
COL18A1-202ENST00000355480 ADRA2BP18089 450 aa19.31■□□□□ 0.68
COL18A1-202ENST00000355480 LRRC31Q6UY01 552 aa19.31■□□□□ 0.68
COL18A1-202ENST00000355480 ARHGEF1Q92888 912 aaKnown RBP19.31■□□□□ 0.68
COL18A1-202ENST00000355480 FAM20AQ96MK3 541 aa19.31■□□□□ 0.68
COL18A1-202ENST00000355480 DCP1AQ9NPI6 582 aaPredicted RBP19.31■□□□□ 0.68
COL18A1-202ENST00000355480 TOGARAM2Q6ZUX3 1019 aa19.3■□□□□ 0.68
COL18A1-202ENST00000355480 CYB5R4Q7L1T6 521 aa19.3■□□□□ 0.68
COL18A1-202ENST00000355480 SRRM1Q8IYB3 904 aaKnown RBP19.3■□□□□ 0.68
COL18A1-202ENST00000355480 FSD1LQ9BXM9 530 aa19.3■□□□□ 0.68
COL18A1-202ENST00000355480 ASNSD1Q9NWL6 643 aa19.3■□□□□ 0.68
COL18A1-202ENST00000355480 HPCAL4Q9UM19 191 aa19.3■□□□□ 0.68
COL18A1-202ENST00000355480 IGKV5-2P06315 115 aa19.3■□□□□ 0.68
COL18A1-202ENST00000355480 ATP1A3P13637 1013 aa19.3■□□□□ 0.68
COL18A1-202ENST00000355480 NNTQ13423 1086 aa19.3■□□□□ 0.68
COL18A1-202ENST00000355480 PPP1R18Q6NYC8 613 aa19.3■□□□□ 0.68
COL18A1-202ENST00000355480 TTC30BQ8N4P2 665 aa19.3■□□□□ 0.68
COL18A1-202ENST00000355480 PRPF38AQ8NAV1 312 aaKnown RBP19.3■□□□□ 0.68
COL18A1-202ENST00000355480 CNOT10Q9H9A5 744 aaKnown RBP19.3■□□□□ 0.68
COL18A1-202ENST00000355480 GABBR1Q9UBS5 961 aa19.3■□□□□ 0.68
COL18A1-202ENST00000355480 ACSL3O95573 720 aa19.3■□□□□ 0.68
COL18A1-202ENST00000355480 SLC10A5Q5PT55 438 aa19.3■□□□□ 0.68
COL18A1-202ENST00000355480 ANGPTL8Q6UXH0 198 aa19.3■□□□□ 0.68
COL18A1-202ENST00000355480 TMEM260Q9NX78 707 aa19.3■□□□□ 0.68
COL18A1-202ENST00000355480 HACD3Q9P035 362 aa19.3■□□□□ 0.68
COL18A1-202ENST00000355480 PTCH1Q13635 1447 aa19.3■□□□□ 0.68
COL18A1-202ENST00000355480 IPO5O00410 1097 aaKnown RBP19.3■□□□□ 0.68
COL18A1-202ENST00000355480 CFLARO15519 480 aa19.3■□□□□ 0.68
COL18A1-202ENST00000355480 CA4P22748 312 aa19.3■□□□□ 0.68
COL18A1-202ENST00000355480 FASTKD5Q7L8L6 764 aaKnown RBP19.3■□□□□ 0.68
COL18A1-202ENST00000355480 FBXL13Q8NEE6 735 aa19.3■□□□□ 0.68
COL18A1-202ENST00000355480 WHAMMQ8TF30 809 aa19.3■□□□□ 0.68
COL18A1-202ENST00000355480 TAC1P20366 129 aa19.3■□□□□ 0.68
COL18A1-202ENST00000355480 SFNP31947 248 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms