RNA–Protein interactions for RNA: ENST00000324309.8

CCDC149-201, Transcript of coiled-coil domain containing 149, humanhuman

TSL 2

Gene CCDC149, Length 5,604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-201ENST00000324309 RHPN2Q8IUC4 686 aa13.86□□□□□ -0.19
CCDC149-201ENST00000324309 GPD1LQ8N335 351 aa13.86□□□□□ -0.19
CCDC149-201ENST00000324309 ARFGAP2Q8N6H7 521 aa13.86□□□□□ -0.19
CCDC149-201ENST00000324309 SUCLA2Q9P2R7 463 aaPredicted RBP13.86□□□□□ -0.19
CCDC149-201ENST00000324309 C17orf102A2RUQ5 167 aa13.86□□□□□ -0.19
CCDC149-201ENST00000324309 PCNX4Q63HM2 1172 aa13.86□□□□□ -0.19
CCDC149-201ENST00000324309 CD302Q8IX05 232 aa13.86□□□□□ -0.19
CCDC149-201ENST00000324309 RNF139Q8WU17 664 aa13.86□□□□□ -0.19
CCDC149-201ENST00000324309 NLRC4Q9NPP4 1024 aa13.86□□□□□ -0.19
CCDC149-201ENST00000324309 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.86□□□□□ -0.19
CCDC149-201ENST00000324309 CD4P01730 458 aa13.85□□□□□ -0.19
CCDC149-201ENST00000324309 CCDC170Q8IYT3 715 aa13.85□□□□□ -0.19
CCDC149-201ENST00000324309 IPO11Q9UI26 975 aaKnown RBP13.85□□□□□ -0.19
CCDC149-201ENST00000324309 STRIP2Q9ULQ0 834 aa13.85□□□□□ -0.19
CCDC149-201ENST00000324309 PDHXO00330 501 aa13.85□□□□□ -0.19
CCDC149-201ENST00000324309 HSPA6P17066 643 aa13.85□□□□□ -0.19
CCDC149-201ENST00000324309 COASYQ13057 564 aa13.85□□□□□ -0.19
CCDC149-201ENST00000324309 TRIM72Q6ZMU5 477 aa13.85□□□□□ -0.19
CCDC149-201ENST00000324309 INCENPQ9NQS7 918 aa13.85□□□□□ -0.19
CCDC149-201ENST00000324309 SHPRHQ149N8 1683 aa13.85□□□□□ -0.19
CCDC149-201ENST00000324309 APOBEC3HQ6NTF7 200 aaKnown RBP13.85□□□□□ -0.19
CCDC149-201ENST00000324309 TYW1BQ6NUM6 668 aa13.85□□□□□ -0.19
CCDC149-201ENST00000324309 ZKSCAN4Q969J2 545 aaPredicted RBP13.85□□□□□ -0.19
CCDC149-201ENST00000324309 TFRCP02786 760 aaKnown RBP13.85□□□□□ -0.19
CCDC149-201ENST00000324309 C3orf67Q6ZVT6 689 aa13.85□□□□□ -0.19
CCDC149-201ENST00000324309 XPO4Q9C0E2 1151 aaKnown RBP13.85□□□□□ -0.19
CCDC149-201ENST00000324309 PDXKO00764 312 aa13.84□□□□□ -0.19
CCDC149-201ENST00000324309 HERVK_113P62684 666 aa13.84□□□□□ -0.19
CCDC149-201ENST00000324309 LONRF3Q496Y0 759 aa13.84□□□□□ -0.19
CCDC149-201ENST00000324309 CCDC89Q8N998 374 aa13.84□□□□□ -0.19
CCDC149-201ENST00000324309 SHCBP1Q8NEM2 672 aa13.84□□□□□ -0.19
CCDC149-201ENST00000324309 PHRF1Q9P1Y6 1649 aaKnown RBP13.84□□□□□ -0.19
CCDC149-201ENST00000324309 ZBBXA8MT70 800 aa13.84□□□□□ -0.19
CCDC149-201ENST00000324309 EIF3DO15371 548 aaKnown RBP eCLIP13.84□□□□□ -0.19
CCDC149-201ENST00000324309 PRKCBP05771 671 aa13.84□□□□□ -0.19
CCDC149-201ENST00000324309 SLFNL1Q499Z3 407 aa13.84□□□□□ -0.19
CCDC149-201ENST00000324309 RGMBQ6NW40 437 aa13.84□□□□□ -0.19
CCDC149-201ENST00000324309 SFR1Q86XK3 245 aa13.84□□□□□ -0.19
CCDC149-201ENST00000324309 IFT20Q8IY31 132 aa13.84□□□□□ -0.19
CCDC149-201ENST00000324309 FAM107BQ9H098 131 aa13.84□□□□□ -0.19
CCDC149-201ENST00000324309 SPATC1LQ9H0A9 340 aa13.84□□□□□ -0.19
CCDC149-201ENST00000324309 HOMER3Q9NSC5 361 aa13.84□□□□□ -0.19
CCDC149-201ENST00000324309 GCNT4Q9P109 453 aa13.84□□□□□ -0.19
CCDC149-201ENST00000324309 RIC1Q4ADV7 1423 aa13.84□□□□□ -0.19
CCDC149-201ENST00000324309 NR3C1P04150 777 aa13.84□□□□□ -0.19
CCDC149-201ENST00000324309 VEPH1Q14D04 833 aa13.84□□□□□ -0.19
CCDC149-201ENST00000324309 CNPY4Q8N129 248 aa13.84□□□□□ -0.19
CCDC149-201ENST00000324309 DDX50Q9BQ39 737 aaKnown RBP13.84□□□□□ -0.19
CCDC149-201ENST00000324309 ARFGAP3Q9NP61 516 aa13.84□□□□□ -0.19
CCDC149-201ENST00000324309 USTQ9Y2C2 406 aa13.84□□□□□ -0.19
CCDC149-201ENST00000324309 PRMT2P55345 433 aa13.84□□□□□ -0.19
CCDC149-201ENST00000324309 AFAP1L2Q8N4X5 818 aa13.84□□□□□ -0.19
CCDC149-201ENST00000324309 ACAP3Q96P50 834 aa13.84□□□□□ -0.19
CCDC149-201ENST00000324309 ERCC3P19447 782 aa13.84□□□□□ -0.19
CCDC149-201ENST00000324309 EVCP57679 992 aa13.84□□□□□ -0.19
CCDC149-201ENST00000324309 MKL1Q969V6 931 aa13.84□□□□□ -0.19
CCDC149-201ENST00000324309 AIFM3Q96NN9 605 aa13.84□□□□□ -0.19
CCDC149-201ENST00000324309 LRP6O75581 1613 aa13.83□□□□□ -0.19
CCDC149-201ENST00000324309 POTEMA6NI47 508 aa13.83□□□□□ -0.19
CCDC149-201ENST00000324309 PLA2G6O60733 806 aa13.83□□□□□ -0.19
CCDC149-201ENST00000324309 TCP1P17987 556 aaKnown RBP13.83□□□□□ -0.19
CCDC149-201ENST00000324309 YY1P25490 414 aa13.83□□□□□ -0.19
CCDC149-201ENST00000324309 ZBED6P86452 979 aa13.83□□□□□ -0.19
CCDC149-201ENST00000324309 MTMR3Q13615 1198 aa13.83□□□□□ -0.19
CCDC149-201ENST00000324309 CYFIP1Q7L576 1253 aa13.83□□□□□ -0.19
CCDC149-201ENST00000324309 ANKRD13CQ8N6S4 541 aa13.83□□□□□ -0.19
CCDC149-201ENST00000324309 SYT17Q9BSW7 474 aa13.83□□□□□ -0.19
CCDC149-201ENST00000324309 EFCC1Q9HA90 598 aa13.83□□□□□ -0.19
CCDC149-201ENST00000324309 MYO1FO00160 1098 aa13.83□□□□□ -0.2
CCDC149-201ENST00000324309 SREBF1P36956 1147 aa13.83□□□□□ -0.2
CCDC149-201ENST00000324309 NFIAQ12857 509 aa13.83□□□□□ -0.2
CCDC149-201ENST00000324309 Q4G0T1 1027 aa13.83□□□□□ -0.2
CCDC149-201ENST00000324309 DAAM2Q86T65 1068 aa13.83□□□□□ -0.2
CCDC149-201ENST00000324309 CCHCR1Q8TD31 782 aa13.83□□□□□ -0.2
CCDC149-201ENST00000324309 UPF1Q92900 1129 aaKnown RBP eCLIP13.83□□□□□ -0.2
CCDC149-201ENST00000324309 EDEM3Q9BZQ6 932 aa13.83□□□□□ -0.2
CCDC149-201ENST00000324309 SLC15A5A6NIM6 579 aa13.83□□□□□ -0.2
CCDC149-201ENST00000324309 TDP2O95551 362 aa13.83□□□□□ -0.2
CCDC149-201ENST00000324309 SERPING1P05155 500 aa13.83□□□□□ -0.2
CCDC149-201ENST00000324309 PLS3P13797 630 aa13.83□□□□□ -0.2
CCDC149-201ENST00000324309 SHMT1P34896 483 aa13.83□□□□□ -0.2
CCDC149-201ENST00000324309 ANTXR2P58335 489 aa13.83□□□□□ -0.2
CCDC149-201ENST00000324309 NUDT18Q6ZVK8 323 aa13.83□□□□□ -0.2
CCDC149-201ENST00000324309 NDUFAF2Q8N183 169 aa13.83□□□□□ -0.2
CCDC149-201ENST00000324309 GSDMBQ8TAX9 411 aa13.83□□□□□ -0.2
CCDC149-201ENST00000324309 TRPV6Q9H1D0 765 aa13.83□□□□□ -0.2
CCDC149-201ENST00000324309 RIOX1Q9H6W3 641 aa13.83□□□□□ -0.2
CCDC149-201ENST00000324309 FANCLQ9NW38 375 aa13.83□□□□□ -0.2
CCDC149-201ENST00000324309 HYOU1Q9Y4L1 999 aa13.83□□□□□ -0.2
CCDC149-201ENST00000324309 GPR182O15218 404 aa13.83□□□□□ -0.2
CCDC149-201ENST00000324309 DEFB115Q30KQ5 88 aa13.83□□□□□ -0.2
CCDC149-201ENST00000324309 ZNF699Q32M78 642 aa13.83□□□□□ -0.2
CCDC149-201ENST00000324309 TOGARAM2Q6ZUX3 1019 aa13.83□□□□□ -0.2
CCDC149-201ENST00000324309 MICAL1Q8TDZ2 1067 aa13.83□□□□□ -0.2
CCDC149-201ENST00000324309 TNIP3Q96KP6 325 aa13.83□□□□□ -0.2
CCDC149-201ENST00000324309 PPP1R9BQ96SB3 815 aa13.83□□□□□ -0.2
CCDC149-201ENST00000324309 PPP1R21Q6ZMI0 780 aa13.82□□□□□ -0.2
CCDC149-201ENST00000324309 FRMD5Q7Z6J6 570 aa13.82□□□□□ -0.2
CCDC149-201ENST00000324309 TXNRD3Q86VQ6 643 aa13.82□□□□□ -0.2
CCDC149-201ENST00000324309 PIGOQ8TEQ8 1089 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms