RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 TBC1D8BQ0IIM8 1120 aa19.99■□□□□ 0.79
TPM1-203ENST00000317516 NAALADL2Q58DX5 795 aa19.99■□□□□ 0.79
TPM1-203ENST00000317516 XKR3Q5GH77 459 aa19.99■□□□□ 0.79
TPM1-203ENST00000317516 PPP4R3AQ6IN85 833 aa19.99■□□□□ 0.79
TPM1-203ENST00000317516 SLC24A5Q71RS6 500 aa19.99■□□□□ 0.79
TPM1-203ENST00000317516 CRIPAKQ8N1N5 446 aa19.99■□□□□ 0.79
TPM1-203ENST00000317516 ETNPPLQ8TBG4 499 aa19.99■□□□□ 0.79
TPM1-203ENST00000317516 TMEM40Q8WWA1 233 aa19.99■□□□□ 0.79
TPM1-203ENST00000317516 GJA10Q969M2 543 aa19.99■□□□□ 0.79
TPM1-203ENST00000317516 PPP1R16BQ96T49 567 aa19.99■□□□□ 0.79
TPM1-203ENST00000317516 ADAM2Q99965 735 aa19.99■□□□□ 0.79
TPM1-203ENST00000317516 BRMS1Q9HCU9 246 aa19.99■□□□□ 0.79
TPM1-203ENST00000317516 RGS18Q9NS28 235 aa19.99■□□□□ 0.79
TPM1-203ENST00000317516 COL4A6Q14031 1691 aa19.99■□□□□ 0.79
TPM1-203ENST00000317516 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.98■□□□□ 0.79
TPM1-203ENST00000317516 NCK2O43639 380 aa19.98■□□□□ 0.79
TPM1-203ENST00000317516 MARCH6O60337 910 aa19.98■□□□□ 0.79
TPM1-203ENST00000317516 DKC1O60832 514 aaKnown RBP eCLIP19.98■□□□□ 0.79
TPM1-203ENST00000317516 DNM2P50570 870 aa19.98■□□□□ 0.79
TPM1-203ENST00000317516 NEK4P51957 841 aa19.98■□□□□ 0.79
TPM1-203ENST00000317516 NIFKQ9BYG3 293 aaKnown RBP19.98■□□□□ 0.79
TPM1-203ENST00000317516 NSUN3Q9H649 340 aaKnown RBP19.98■□□□□ 0.79
TPM1-203ENST00000317516 UBE2ZQ9H832 354 aaPredicted RBP19.98■□□□□ 0.79
TPM1-203ENST00000317516 CTDNEP1O95476 244 aa19.97■□□□□ 0.79
TPM1-203ENST00000317516 ZSCAN20P17040 1043 aaPredicted RBP19.97■□□□□ 0.79
TPM1-203ENST00000317516 IBSPP21815 317 aaPredicted RBP19.97■□□□□ 0.79
TPM1-203ENST00000317516 EIF4BP23588 611 aaKnown RBP19.97■□□□□ 0.79
TPM1-203ENST00000317516 PSMC5P62195 406 aa19.97■□□□□ 0.79
TPM1-203ENST00000317516 UGCGQ16739 394 aa19.97■□□□□ 0.79
TPM1-203ENST00000317516 B3GNT9Q6UX72 402 aa19.97■□□□□ 0.79
TPM1-203ENST00000317516 PIK3AP1Q6ZUJ8 805 aa19.97■□□□□ 0.79
TPM1-203ENST00000317516 LRRC71Q8N4P6 559 aa19.97■□□□□ 0.79
TPM1-203ENST00000317516 P2RX5Q93086 422 aa19.97■□□□□ 0.79
TPM1-203ENST00000317516 SCLT1Q96NL6 688 aa19.97■□□□□ 0.79
TPM1-203ENST00000317516 DDX11L8A8MPP1 907 aa19.96■□□□□ 0.79
TPM1-203ENST00000317516 TBX3O15119 743 aa19.96■□□□□ 0.79
TPM1-203ENST00000317516 CCNT1O60563 726 aaKnown RBP19.96■□□□□ 0.79
TPM1-203ENST00000317516 LINC00271P0C7V0 271 aa19.96■□□□□ 0.79
TPM1-203ENST00000317516 TARBP2Q15633 366 aaKnown RBP19.96■□□□□ 0.79
TPM1-203ENST00000317516 ME3Q16798 604 aa19.96■□□□□ 0.79
TPM1-203ENST00000317516 FAM228AQ86W67 206 aa19.96■□□□□ 0.79
TPM1-203ENST00000317516 LINC01465Q8N7H1 131 aa19.96■□□□□ 0.79
TPM1-203ENST00000317516 NECAB1Q8N987 351 aa19.96■□□□□ 0.79
TPM1-203ENST00000317516 ADAMTS10Q9H324 1103 aa19.96■□□□□ 0.79
TPM1-203ENST00000317516 SEPT9Q9UHD8 586 aaPredicted RBP19.96■□□□□ 0.79
TPM1-203ENST00000317516 MRPL42Q9Y6G3 142 aaKnown RBP19.96■□□□□ 0.79
TPM1-203ENST00000317516 C9IYK1 514 aa19.95■□□□□ 0.78
TPM1-203ENST00000317516 GRM6O15303 877 aa19.95■□□□□ 0.78
TPM1-203ENST00000317516 SLC37A4O43826 429 aa19.95■□□□□ 0.78
TPM1-203ENST00000317516 MGEA5O60502 916 aa19.95■□□□□ 0.78
TPM1-203ENST00000317516 BAG4O95429 457 aaKnown RBP19.95■□□□□ 0.78
TPM1-203ENST00000317516 KCNA5P22460 613 aa19.95■□□□□ 0.78
TPM1-203ENST00000317516 KRT2P35908 639 aa19.95■□□□□ 0.78
TPM1-203ENST00000317516 PPP2R5CQ13362 524 aa19.95■□□□□ 0.78
TPM1-203ENST00000317516 TRIM29Q14134 588 aa19.95■□□□□ 0.78
TPM1-203ENST00000317516 PUS10Q3MIT2 529 aaKnown RBP19.95■□□□□ 0.78
TPM1-203ENST00000317516 LEXMQ3ZCV2 418 aa19.95■□□□□ 0.78
TPM1-203ENST00000317516 MTERF2Q49AM1 385 aa19.95■□□□□ 0.78
TPM1-203ENST00000317516 PAN2Q504Q3 1202 aaKnown RBP19.95■□□□□ 0.78
TPM1-203ENST00000317516 TCEAL5Q5H9L2 206 aa19.95■□□□□ 0.78
TPM1-203ENST00000317516 GTF3C6Q969F1 213 aa19.95■□□□□ 0.78
TPM1-203ENST00000317516 JPH2Q9BR39 696 aaPredicted RBP19.95■□□□□ 0.78
TPM1-203ENST00000317516 ELAC1Q9H777 363 aaKnown RBP19.95■□□□□ 0.78
TPM1-203ENST00000317516 ATP6V0A4Q9HBG4 840 aa19.95■□□□□ 0.78
TPM1-203ENST00000317516 KCNMB3Q9NPA1 279 aa19.95■□□□□ 0.78
TPM1-203ENST00000317516 AAASQ9NRG9 546 aa19.95■□□□□ 0.78
TPM1-203ENST00000317516 GJB4Q9NTQ9 266 aa19.95■□□□□ 0.78
TPM1-203ENST00000317516 TMEM161AQ9NX61 479 aa19.95■□□□□ 0.78
TPM1-203ENST00000317516 PLAGL2Q9UPG8 496 aa19.95■□□□□ 0.78
TPM1-203ENST00000317516 TTC3P53804 2025 aa19.95■□□□□ 0.78
TPM1-203ENST00000317516 QARSP47897 775 aaKnown RBP19.94■□□□□ 0.78
TPM1-203ENST00000317516 GPC3P51654 580 aa19.94■□□□□ 0.78
TPM1-203ENST00000317516 FAM189BP81408 668 aa19.94■□□□□ 0.78
TPM1-203ENST00000317516 SPOUT1Q5T280 376 aaKnown RBP19.94■□□□□ 0.78
TPM1-203ENST00000317516 EXOC8Q8IYI6 725 aa19.94■□□□□ 0.78
TPM1-203ENST00000317516 OXER1Q8TDS5 423 aa19.94■□□□□ 0.78
TPM1-203ENST00000317516 NLRP7Q8WX94 980 aa19.94■□□□□ 0.78
TPM1-203ENST00000317516 PPP2R3CQ969Q6 453 aa19.94■□□□□ 0.78
TPM1-203ENST00000317516 PABPC5Q96DU9 382 aaKnown RBP19.94■□□□□ 0.78
TPM1-203ENST00000317516 NECAB3Q96P71 396 aaPredicted RBP19.94■□□□□ 0.78
TPM1-203ENST00000317516 GCOM2Q9BZD3 368 aaPredicted RBP19.94■□□□□ 0.78
TPM1-203ENST00000317516 TBKBP1A7MCY6 615 aa19.93■□□□□ 0.78
TPM1-203ENST00000317516 HOXA2O43364 376 aa19.93■□□□□ 0.78
TPM1-203ENST00000317516 MMP1P03956 469 aa19.93■□□□□ 0.78
TPM1-203ENST00000317516 P4HBP07237 508 aaKnown RBP19.93■□□□□ 0.78
TPM1-203ENST00000317516 FDPSP14324 419 aaKnown RBP19.93■□□□□ 0.78
TPM1-203ENST00000317516 DARSP14868 501 aaKnown RBP19.93■□□□□ 0.78
TPM1-203ENST00000317516 EP400NLQ6ZTU2 488 aa19.93■□□□□ 0.78
TPM1-203ENST00000317516 SLFN12Q8IYM2 578 aa19.93■□□□□ 0.78
TPM1-203ENST00000317516 INO80BQ9C086 356 aaPredicted RBP19.93■□□□□ 0.78
TPM1-203ENST00000317516 ALG13Q9NP73 1137 aaKnown RBP19.93■□□□□ 0.78
TPM1-203ENST00000317516 PCDHB12Q9Y5F1 795 aa19.93■□□□□ 0.78
TPM1-203ENST00000317516 SIP14410 1827 aa19.92■□□□□ 0.78
TPM1-203ENST00000317516 STBD1O95210 358 aa19.92■□□□□ 0.78
TPM1-203ENST00000317516 DSC3Q14574 896 aa19.92■□□□□ 0.78
TPM1-203ENST00000317516 KLHL23Q8NBE8 558 aa19.92■□□□□ 0.78
TPM1-203ENST00000317516 NSUN7Q8NE18 718 aaKnown RBP19.92■□□□□ 0.78
TPM1-203ENST00000317516 VAV3Q9UKW4 847 aa19.92■□□□□ 0.78
TPM1-203ENST00000317516 FAM50BQ9Y247 325 aa19.92■□□□□ 0.78
TPM1-203ENST00000317516 PPME1Q9Y570 386 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms