RNA–Protein interactions for RNA: ENST00000307301.11

MRPL39-201, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MRPL39, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-201ENST00000307301 CERS4Q9HA82 394 aa23.35■■□□□ 1.33
MRPL39-201ENST00000307301 CHD7Q9P2D1 2997 aa23.35■■□□□ 1.33
MRPL39-201ENST00000307301 COL6A3P12111 3177 aa23.35■■□□□ 1.33
MRPL39-201ENST00000307301 MYO9BQ13459 2157 aa23.34■■□□□ 1.33
MRPL39-201ENST00000307301 DKC1O60832 514 aaKnown RBP eCLIP23.34■■□□□ 1.33
MRPL39-201ENST00000307301 GPR32O75388 356 aa23.34■■□□□ 1.33
MRPL39-201ENST00000307301 U2AF2P26368 475 aaKnown RBP eCLIP23.34■■□□□ 1.33
MRPL39-201ENST00000307301 CYP4A11Q02928 519 aa23.34■■□□□ 1.33
MRPL39-201ENST00000307301 ZNF174Q15697 407 aa23.34■■□□□ 1.33
MRPL39-201ENST00000307301 SPRED2Q7Z698 418 aa23.34■■□□□ 1.33
MRPL39-201ENST00000307301 LINC01599Q8WXQ3 324 aa23.34■■□□□ 1.33
MRPL39-201ENST00000307301 OSMRQ99650 979 aa23.34■■□□□ 1.33
MRPL39-201ENST00000307301 NOC2LQ9Y3T9 749 aaKnown RBP23.34■■□□□ 1.33
MRPL39-201ENST00000307301 COL4A4P53420 1690 aaPredicted RBP23.34■■□□□ 1.33
MRPL39-201ENST00000307301 CDH23Q9H251 3354 aa23.34■■□□□ 1.33
MRPL39-201ENST00000307301 ENPP3O14638 875 aa23.33■■□□□ 1.33
MRPL39-201ENST00000307301 CRYBB1P53674 252 aaPredicted RBP23.33■■□□□ 1.33
MRPL39-201ENST00000307301 NLRP11P59045 1033 aaKnown RBP23.33■■□□□ 1.33
MRPL39-201ENST00000307301 HTRA4P83105 476 aaPredicted RBP23.33■■□□□ 1.33
MRPL39-201ENST00000307301 CTTNQ14247 550 aaKnown RBP23.33■■□□□ 1.33
MRPL39-201ENST00000307301 TTC38Q5R3I4 469 aa23.33■■□□□ 1.33
MRPL39-201ENST00000307301 GAS2L1Q99501 681 aaPredicted RBP23.33■■□□□ 1.33
MRPL39-201ENST00000307301 EIF2AK1Q9BQI3 630 aaKnown RBP23.33■■□□□ 1.33
MRPL39-201ENST00000307301 INSL6Q9Y581 213 aa23.33■■□□□ 1.33
MRPL39-201ENST00000307301 TTC3P53804 2025 aa23.32■■□□□ 1.32
MRPL39-201ENST00000307301 RPS6KA5O75582 802 aa23.32■■□□□ 1.32
MRPL39-201ENST00000307301 NPEPPSP55786 919 aa23.32■■□□□ 1.32
MRPL39-201ENST00000307301 DRP2Q13474 957 aa23.32■■□□□ 1.32
MRPL39-201ENST00000307301 NBR1Q14596 966 aa23.32■■□□□ 1.32
MRPL39-201ENST00000307301 RTN4RL1Q86UN2 441 aaPredicted RBP23.32■■□□□ 1.32
MRPL39-201ENST00000307301 C4orf19Q8IY42 314 aa23.32■■□□□ 1.32
MRPL39-201ENST00000307301 ZNF668Q96K58 619 aaPredicted RBP23.32■■□□□ 1.32
MRPL39-201ENST00000307301 TMX1Q9H3N1 280 aa23.32■■□□□ 1.32
MRPL39-201ENST00000307301 ERVK-5Q9HDB9 667 aa23.32■■□□□ 1.32
MRPL39-201ENST00000307301 CYP26B1Q9NR63 512 aa23.32■■□□□ 1.32
MRPL39-201ENST00000307301 NOL7Q9UMY1 257 aaKnown RBP23.32■■□□□ 1.32
MRPL39-201ENST00000307301 SMC3Q9UQE7 1217 aa23.32■■□□□ 1.32
MRPL39-201ENST00000307301 NLRC5Q86WI3 1866 aa23.32■■□□□ 1.32
MRPL39-201ENST00000307301 IGKV6-21A0A0C4DH24 114 aa23.31■■□□□ 1.32
MRPL39-201ENST00000307301 LINC01553A4QN01 128 aa23.31■■□□□ 1.32
MRPL39-201ENST00000307301 POTEMA6NI47 508 aa23.31■■□□□ 1.32
MRPL39-201ENST00000307301 TRAPPC10P48553 1259 aa23.31■■□□□ 1.32
MRPL39-201ENST00000307301 NFX1Q12986 1120 aaKnown RBP23.31■■□□□ 1.32
MRPL39-201ENST00000307301 ORC2Q13416 577 aaPredicted RBP23.31■■□□□ 1.32
MRPL39-201ENST00000307301 ADGRE1Q14246 886 aa23.31■■□□□ 1.32
MRPL39-201ENST00000307301 TPH2Q8IWU9 490 aa23.31■■□□□ 1.32
MRPL39-201ENST00000307301 ZNF579Q8NAF0 562 aaKnown RBP23.31■■□□□ 1.32
MRPL39-201ENST00000307301 MAFAQ8NHW3 353 aaPredicted RBP23.31■■□□□ 1.32
MRPL39-201ENST00000307301 ARNTL2Q8WYA1 636 aa23.31■■□□□ 1.32
MRPL39-201ENST00000307301 FTHL17Q9BXU8 183 aa23.31■■□□□ 1.32
MRPL39-201ENST00000307301 ADAMTS10Q9H324 1103 aa23.31■■□□□ 1.32
MRPL39-201ENST00000307301 ZSWIM4Q9H7M6 989 aa23.31■■□□□ 1.32
MRPL39-201ENST00000307301 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.31■■□□□ 1.32
MRPL39-201ENST00000307301 EPOPA6NHQ4 379 aa23.3■■□□□ 1.32
MRPL39-201ENST00000307301 RFXAPO00287 272 aa23.3■■□□□ 1.32
MRPL39-201ENST00000307301 MAFO75444 373 aaPredicted RBP23.3■■□□□ 1.32
MRPL39-201ENST00000307301 SLITRK3O94933 977 aa23.3■■□□□ 1.32
MRPL39-201ENST00000307301 OR52Z1P0C646 297 aa23.3■■□□□ 1.32
MRPL39-201ENST00000307301 YWHABP31946 246 aaKnown RBP23.3■■□□□ 1.32
MRPL39-201ENST00000307301 GPC3P51654 580 aa23.3■■□□□ 1.32
MRPL39-201ENST00000307301 MCTP1Q6DN14 999 aa23.3■■□□□ 1.32
MRPL39-201ENST00000307301 FAM228AQ86W67 206 aa23.3■■□□□ 1.32
MRPL39-201ENST00000307301 CEP170P1Q96L14 293 aa23.3■■□□□ 1.32
MRPL39-201ENST00000307301 YME1L1Q96TA2 773 aa23.3■■□□□ 1.32
MRPL39-201ENST00000307301 ST3GAL5Q9UNP4 418 aa23.3■■□□□ 1.32
MRPL39-201ENST00000307301 COL4A6Q14031 1691 aa23.29■■□□□ 1.32
MRPL39-201ENST00000307301 ZBTB39O15060 712 aa23.29■■□□□ 1.32
MRPL39-201ENST00000307301 MGEA5O60502 916 aa23.29■■□□□ 1.32
MRPL39-201ENST00000307301 TOB1P50616 345 aaPredicted RBP23.29■■□□□ 1.32
MRPL39-201ENST00000307301 NEK9Q8TD19 979 aa23.29■■□□□ 1.32
MRPL39-201ENST00000307301 SP7Q8TDD2 431 aaPredicted RBP23.29■■□□□ 1.32
MRPL39-201ENST00000307301 HSD17B14Q9BPX1 270 aa23.29■■□□□ 1.32
MRPL39-201ENST00000307301 TSPYL2Q9H2G4 693 aaPredicted RBP23.29■■□□□ 1.32
MRPL39-201ENST00000307301 H3BQV1 296 aa23.28■■□□□ 1.32
MRPL39-201ENST00000307301 GPR182O15218 404 aa23.28■■□□□ 1.32
MRPL39-201ENST00000307301 IGFBP4P22692 258 aa23.28■■□□□ 1.32
MRPL39-201ENST00000307301 TECP42680 631 aa23.28■■□□□ 1.32
MRPL39-201ENST00000307301 DNM2P50570 870 aa23.28■■□□□ 1.32
MRPL39-201ENST00000307301 CUL4AQ13619 759 aa23.28■■□□□ 1.32
MRPL39-201ENST00000307301 ODR4Q5SWX8 454 aa23.28■■□□□ 1.32
MRPL39-201ENST00000307301 OTUD6AQ7L8S5 288 aa23.28■■□□□ 1.32
MRPL39-201ENST00000307301 ZNF710Q8N1W2 664 aa23.28■■□□□ 1.32
MRPL39-201ENST00000307301 SCLT1Q96NL6 688 aa23.28■■□□□ 1.32
MRPL39-201ENST00000307301 MTUS1Q9ULD2 1270 aa23.28■■□□□ 1.32
MRPL39-201ENST00000307301 PCDHB6Q9Y5E3 794 aa23.28■■□□□ 1.32
MRPL39-201ENST00000307301 RALGAPA2Q2PPJ7 1873 aa23.28■■□□□ 1.32
MRPL39-201ENST00000307301 TRANK1O15050 2925 aa23.27■■□□□ 1.32
MRPL39-201ENST00000307301 EIF4BP23588 611 aaKnown RBP23.27■■□□□ 1.32
MRPL39-201ENST00000307301 POLGP54098 1239 aaPredicted RBP23.27■■□□□ 1.32
MRPL39-201ENST00000307301 XKR9Q5GH70 373 aa23.27■■□□□ 1.32
MRPL39-201ENST00000307301 C4orf32Q8N8J7 132 aa23.27■■□□□ 1.32
MRPL39-201ENST00000307301 NLRP7Q8WX94 980 aa23.27■■□□□ 1.32
MRPL39-201ENST00000307301 SLC7A3Q8WY07 619 aa23.27■■□□□ 1.32
MRPL39-201ENST00000307301 TGS1Q96RS0 853 aaKnown RBP23.27■■□□□ 1.32
MRPL39-201ENST00000307301 JPH2Q9BR39 696 aaPredicted RBP23.27■■□□□ 1.32
MRPL39-201ENST00000307301 DHX33Q9H6R0 707 aaKnown RBP23.27■■□□□ 1.32
MRPL39-201ENST00000307301 BMP2KQ9NSY1 1161 aaPredicted RBP23.27■■□□□ 1.32
MRPL39-201ENST00000307301 SUCLA2Q9P2R7 463 aaPredicted RBP23.27■■□□□ 1.32
MRPL39-201ENST00000307301 PPME1Q9Y570 386 aa23.27■■□□□ 1.32
MRPL39-201ENST00000307301 LYPLA2O95372 231 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms