RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 HERVK_113P62684 666 aa13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 ZNF543Q08ER8 600 aa13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 RASA3Q14644 834 aa13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 CCDC93Q567U6 631 aa13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 CAPRIN2Q6IMN6 1127 aaKnown RBP13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 NLGN1Q8N2Q7 840 aa13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 DYDC2Q96IM9 177 aa13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 QTRT2Q9H974 415 aaKnown RBP13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 RNF225M0QZC1 329 aaPredicted RBP13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 CYTH3O43739 400 aa13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 KIF1CO43896 1103 aaKnown RBP13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 RCN2Q14257 317 aa13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 KAZNQ674X7 775 aa13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 EMBQ6PCB8 327 aa13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 NLRX1Q86UT6 975 aa13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 POMGNT1Q8WZA1 660 aa13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 SNX24Q9Y343 169 aa13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 GCLMP48507 274 aa13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 KNOP1Q1ED39 458 aaKnown RBP13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 NT5DC1Q5TFE4 455 aa13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 ELOA2Q8IYF1 753 aaPredicted RBP13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 LRRC8CQ8TDW0 803 aa13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 DHX36Q9H2U1 1008 aaKnown RBP13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 DCUN1D2Q6PH85 259 aa13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 CCNI2Q6ZMN8 369 aaPredicted RBP13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 PTF1AQ7RTS3 328 aa13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 CNPY4Q8N129 248 aa13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 SEMA6BQ9H3T3 888 aa13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 JMJD4Q9H9V9 463 aa13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 PARP2Q9UGN5 583 aa13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 DMGDHQ9UI17 866 aaKnown RBP13.54□□□□□ -0.24
SLC6A1-201ENST00000287766 JCADQ9P266 1359 aa13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 NFAT5O94916 1531 aa13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 POC1B-GALNT4F8VUJ3 575 aa13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 KLRC1P26715 233 aa13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 GRB10Q13322 594 aa13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 NUGGCQ68CJ6 796 aa13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 C16orf86Q6ZW13 317 aa13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 RSRC2Q7L4I2 434 aaKnown RBP13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 DDX42Q86XP3 938 aaKnown RBP eCLIP13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 WHAMMQ8TF30 809 aa13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 ZNF653Q96CK0 615 aa13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 AMACRQ9UHK6 382 aa13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 PALM3A6NDB9 673 aaPredicted RBP13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 LMNB1P20700 586 aa13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 GUCY1A3Q02108 690 aa13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 CC2D2BQ6DHV5 1058 aa13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 NUDT12Q9BQG2 462 aa13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 KBTBD4Q9NVX7 518 aa13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 CHORDC1Q9UHD1 332 aaPredicted RBP13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 EXOC7Q9UPT5 735 aa13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 FER1L4A9Z1Z3 1794 aa13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 PSMD14O00487 310 aa13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 TRPA1O75762 1119 aa13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 MYCNP04198 464 aaPredicted RBP13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 ATF7P17544 494 aaPredicted RBP13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 CARSP49589 748 aaKnown RBP13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 STRN3Q13033 797 aa13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 ARHGEF16Q5VV41 709 aa13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 PROM2Q8N271 834 aa13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 PIK3R5Q8WYR1 880 aa13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 YY1AP1Q9H869 796 aa13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 TBK1Q9UHD2 729 aa13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 L1RE1Q9UN81 338 aa13.53□□□□□ -0.24
SLC6A1-201ENST00000287766 HNRNPDLO14979 420 aaKnown RBP13.52□□□□□ -0.24
SLC6A1-201ENST00000287766 IL17AQ16552 155 aa13.52□□□□□ -0.24
SLC6A1-201ENST00000287766 GJB7Q6PEY0 223 aa13.52□□□□□ -0.24
SLC6A1-201ENST00000287766 OTUD6AQ7L8S5 288 aa13.52□□□□□ -0.24
SLC6A1-201ENST00000287766 OR2W6PQ8NHA6 318 aa13.52□□□□□ -0.24
SLC6A1-201ENST00000287766 NACC1Q96RE7 527 aa13.52□□□□□ -0.24
SLC6A1-201ENST00000287766 ITIH3Q06033 890 aa13.52□□□□□ -0.24
SLC6A1-201ENST00000287766 HSP90AA5PQ58FG0 334 aa13.52□□□□□ -0.24
SLC6A1-201ENST00000287766 ALS2CLQ60I27 953 aa13.52□□□□□ -0.24
SLC6A1-201ENST00000287766 RCSD1Q6JBY9 416 aa13.52□□□□□ -0.24
SLC6A1-201ENST00000287766 KLC4Q9NSK0 619 aa13.52□□□□□ -0.24
SLC6A1-201ENST00000287766 HPCAL4Q9UM19 191 aa13.52□□□□□ -0.24
SLC6A1-201ENST00000287766 BCL9O00512 1426 aa13.52□□□□□ -0.25
SLC6A1-201ENST00000287766 MYBP10242 640 aa13.52□□□□□ -0.25
SLC6A1-201ENST00000287766 MAK16Q9BXY0 300 aaKnown RBP13.52□□□□□ -0.25
SLC6A1-201ENST00000287766 ANKFY1Q9P2R3 1169 aa13.52□□□□□ -0.25
SLC6A1-201ENST00000287766 STK24Q9Y6E0 443 aa13.52□□□□□ -0.25
SLC6A1-201ENST00000287766 CACNA1FO60840 1977 aa13.52□□□□□ -0.25
SLC6A1-201ENST00000287766 KRT19P08727 400 aa13.52□□□□□ -0.25
SLC6A1-201ENST00000287766 HMGB2P26583 209 aaKnown RBP13.52□□□□□ -0.25
SLC6A1-201ENST00000287766 PEX3P56589 373 aa13.52□□□□□ -0.25
SLC6A1-201ENST00000287766 DRAP1Q14919 205 aaPredicted RBP13.52□□□□□ -0.25
SLC6A1-201ENST00000287766 ZC2HC1CQ53FD0 456 aaPredicted RBP13.52□□□□□ -0.25
SLC6A1-201ENST00000287766 NFIAQ12857 509 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 ARMC9Q7Z3E5 817 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 GLIS3Q8NEA6 775 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 CYTH2Q99418 400 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 HSD3B7Q9H2F3 369 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 DAPK3O43293 454 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 GMNNO75496 209 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 ELF1P32519 619 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 MAN1A1P33908 653 aa13.51□□□□□ -0.25
SLC6A1-201ENST00000287766 PDE6CP51160 858 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms