RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 FTCDO95954 541 aa19.94■□□□□ 0.78
PCDH1-201ENST00000287008 COASYQ13057 564 aa19.94■□□□□ 0.78
PCDH1-201ENST00000287008 BAATQ14032 418 aaPredicted RBP19.94■□□□□ 0.78
PCDH1-201ENST00000287008 NDUFA10O95299 355 aa19.94■□□□□ 0.78
PCDH1-201ENST00000287008 C10orf67Q8IYJ2 551 aa19.94■□□□□ 0.78
PCDH1-201ENST00000287008 VCPKMTQ9H867 229 aa19.94■□□□□ 0.78
PCDH1-201ENST00000287008 JPH1Q9HDC5 661 aaPredicted RBP19.94■□□□□ 0.78
PCDH1-201ENST00000287008 SPTLC3Q9NUV7 552 aa19.94■□□□□ 0.78
PCDH1-201ENST00000287008 KLHL14Q9P2G3 628 aa19.94■□□□□ 0.78
PCDH1-201ENST00000287008 FNDC3AQ9Y2H6 1198 aaKnown RBP19.94■□□□□ 0.78
PCDH1-201ENST00000287008 OAS2P29728 719 aaKnown RBP19.94■□□□□ 0.78
PCDH1-201ENST00000287008 HUNKP57058 714 aa19.94■□□□□ 0.78
PCDH1-201ENST00000287008 KNOP1Q1ED39 458 aaKnown RBP19.94■□□□□ 0.78
PCDH1-201ENST00000287008 DEFB132Q7Z7B7 95 aa19.94■□□□□ 0.78
PCDH1-201ENST00000287008 CACNA2D3Q8IZS8 1091 aa19.94■□□□□ 0.78
PCDH1-201ENST00000287008 MB21D1Q8N884 522 aa19.94■□□□□ 0.78
PCDH1-201ENST00000287008 POLR3FQ9H1D9 316 aaPredicted RBP19.94■□□□□ 0.78
PCDH1-201ENST00000287008 CDO1Q16878 200 aa19.94■□□□□ 0.78
PCDH1-201ENST00000287008 PARD3BQ8TEW8 1205 aa19.94■□□□□ 0.78
PCDH1-201ENST00000287008 GPC4O75487 556 aa19.93■□□□□ 0.78
PCDH1-201ENST00000287008 S100BP04271 92 aaPredicted RBP19.93■□□□□ 0.78
PCDH1-201ENST00000287008 ATP1A3P13637 1013 aa19.93■□□□□ 0.78
PCDH1-201ENST00000287008 RASSF2P50749 326 aa19.93■□□□□ 0.78
PCDH1-201ENST00000287008 RAPH1Q70E73 1250 aa19.93■□□□□ 0.78
PCDH1-201ENST00000287008 DEFB129Q9H1M3 183 aa19.93■□□□□ 0.78
PCDH1-201ENST00000287008 GPC3P51654 580 aa19.93■□□□□ 0.78
PCDH1-201ENST00000287008 RBBP5Q15291 538 aaKnown RBP19.93■□□□□ 0.78
PCDH1-201ENST00000287008 FBXO33Q7Z6M2 555 aa19.93■□□□□ 0.78
PCDH1-201ENST00000287008 PBKQ96KB5 322 aa19.93■□□□□ 0.78
PCDH1-201ENST00000287008 ZNF512BQ96KM6 892 aaPredicted RBP19.93■□□□□ 0.78
PCDH1-201ENST00000287008 EIF2AK1Q9BQI3 630 aaKnown RBP19.93■□□□□ 0.78
PCDH1-201ENST00000287008 BCAP29Q9UHQ4 241 aa19.93■□□□□ 0.78
PCDH1-201ENST00000287008 ZBED1O96006 694 aa19.93■□□□□ 0.78
PCDH1-201ENST00000287008 EZH2Q15910 746 aaKnown RBP19.93■□□□□ 0.78
PCDH1-201ENST00000287008 TSGA10IPQ3SY00 556 aa19.93■□□□□ 0.78
PCDH1-201ENST00000287008 TOGARAM2Q6ZUX3 1019 aa19.93■□□□□ 0.78
PCDH1-201ENST00000287008 MCUQ8NE86 351 aa19.93■□□□□ 0.78
PCDH1-201ENST00000287008 ACRBPQ8NEB7 543 aa19.93■□□□□ 0.78
PCDH1-201ENST00000287008 HDAC11Q96DB2 347 aa19.93■□□□□ 0.78
PCDH1-201ENST00000287008 SMYD2Q9NRG4 433 aa19.93■□□□□ 0.78
PCDH1-201ENST00000287008 PSMA2P25787 234 aa19.92■□□□□ 0.78
PCDH1-201ENST00000287008 CYP4F22Q6NT55 531 aa19.92■□□□□ 0.78
PCDH1-201ENST00000287008 PNMA8AQ86V59 439 aaPredicted RBP19.92■□□□□ 0.78
PCDH1-201ENST00000287008 MYLK4Q86YV6 388 aaPredicted RBP19.92■□□□□ 0.78
PCDH1-201ENST00000287008 ANGPTL3Q9Y5C1 460 aa19.92■□□□□ 0.78
PCDH1-201ENST00000287008 CROCC2H7BZ55 1655 aa19.92■□□□□ 0.78
PCDH1-201ENST00000287008 INPP5BP32019 993 aa19.92■□□□□ 0.78
PCDH1-201ENST00000287008 CCHCR1Q8TD31 782 aa19.92■□□□□ 0.78
PCDH1-201ENST00000287008 PPP1R13BQ96KQ4 1090 aa19.92■□□□□ 0.78
PCDH1-201ENST00000287008 NUF2Q9BZD4 464 aa19.92■□□□□ 0.78
PCDH1-201ENST00000287008 GGPS1O95749 300 aa19.92■□□□□ 0.78
PCDH1-201ENST00000287008 CASP1P29466 404 aa19.92■□□□□ 0.78
PCDH1-201ENST00000287008 RECQLP46063 649 aaPredicted RBP19.92■□□□□ 0.78
PCDH1-201ENST00000287008 PLTPP55058 493 aa19.92■□□□□ 0.78
PCDH1-201ENST00000287008 TKFCQ3LXA3 575 aa19.92■□□□□ 0.78
PCDH1-201ENST00000287008 SRBD1Q8N5C6 995 aaKnown RBP19.92■□□□□ 0.78
PCDH1-201ENST00000287008 GDAP1Q8TB36 358 aa19.92■□□□□ 0.78
PCDH1-201ENST00000287008 HINFPQ9BQA5 517 aa19.92■□□□□ 0.78
PCDH1-201ENST00000287008 TMEM106CQ9BVX2 250 aa19.92■□□□□ 0.78
PCDH1-201ENST00000287008 GPBP1L1Q9HC44 474 aaPredicted RBP19.92■□□□□ 0.78
PCDH1-201ENST00000287008 SETBP1Q9Y6X0 1596 aa19.92■□□□□ 0.78
PCDH1-201ENST00000287008 ADAMTS13Q76LX8 1427 aa19.92■□□□□ 0.78
PCDH1-201ENST00000287008 APBA1Q02410 837 aa19.92■□□□□ 0.78
PCDH1-201ENST00000287008 TMEM270Q6UE05 265 aa19.92■□□□□ 0.78
PCDH1-201ENST00000287008 TTC39CQ8N584 583 aa19.92■□□□□ 0.78
PCDH1-201ENST00000287008 VCX3BQ9H321 246 aa19.92■□□□□ 0.78
PCDH1-201ENST00000287008 RRAGDQ9NQL2 400 aaPredicted RBP19.92■□□□□ 0.78
PCDH1-201ENST00000287008 KDM6AO15550 1401 aaPredicted RBP19.92■□□□□ 0.78
PCDH1-201ENST00000287008 ARHGAP25P42331 645 aa19.91■□□□□ 0.78
PCDH1-201ENST00000287008 EFNA5P52803 228 aa19.91■□□□□ 0.78
PCDH1-201ENST00000287008 PPP6R3Q5H9R7 873 aaPredicted RBP19.91■□□□□ 0.78
PCDH1-201ENST00000287008 OR6J1Q8NGC5 347 aa19.91■□□□□ 0.78
PCDH1-201ENST00000287008 RABGGTAQ92696 567 aa19.91■□□□□ 0.78
PCDH1-201ENST00000287008 ATP6V1E2Q96A05 226 aa19.91■□□□□ 0.78
PCDH1-201ENST00000287008 ZFYVE28Q9HCC9 887 aa19.91■□□□□ 0.78
PCDH1-201ENST00000287008 MYOZ2Q9NPC6 264 aa19.91■□□□□ 0.78
PCDH1-201ENST00000287008 UBN1Q9NPG3 1134 aa19.91■□□□□ 0.78
PCDH1-201ENST00000287008 THOC5Q13769 683 aaKnown RBP19.91■□□□□ 0.78
PCDH1-201ENST00000287008 PRAMEF18Q5VWM3 479 aa19.91■□□□□ 0.78
PCDH1-201ENST00000287008 ELMOD1Q8N336 334 aa19.91■□□□□ 0.78
PCDH1-201ENST00000287008 AGBL3Q8NEM8 1001 aa19.91■□□□□ 0.78
PCDH1-201ENST00000287008 TRIM56Q9BRZ2 755 aaKnown RBP19.91■□□□□ 0.78
PCDH1-201ENST00000287008 C6orf222P0C671 652 aaPredicted RBP19.91■□□□□ 0.78
PCDH1-201ENST00000287008 KCNH2Q12809 1159 aa19.91■□□□□ 0.78
PCDH1-201ENST00000287008 RWDD4Q6NW29 188 aaKnown RBP19.91■□□□□ 0.78
PCDH1-201ENST00000287008 GUF1Q8N442 669 aaKnown RBP19.91■□□□□ 0.78
PCDH1-201ENST00000287008 GANCQ8TET4 914 aa19.91■□□□□ 0.78
PCDH1-201ENST00000287008 HAUS6Q7Z4H7 955 aa19.91■□□□□ 0.78
PCDH1-201ENST00000287008 ANKRD13AQ8IZ07 590 aa19.91■□□□□ 0.78
PCDH1-201ENST00000287008 MTIF3Q9H2K0 278 aaKnown RBP19.91■□□□□ 0.78
PCDH1-201ENST00000287008 PTPRMP28827 1452 aa19.91■□□□□ 0.78
PCDH1-201ENST00000287008 DYNC1LI2O43237 492 aaPredicted RBP19.9■□□□□ 0.78
PCDH1-201ENST00000287008 TBXAS1P24557 533 aaPredicted RBP19.9■□□□□ 0.78
PCDH1-201ENST00000287008 RWDD2BP57060 319 aa19.9■□□□□ 0.78
PCDH1-201ENST00000287008 RAB3IPQ96QF0 476 aaPredicted RBP19.9■□□□□ 0.78
PCDH1-201ENST00000287008 PANX2Q96RD6 677 aa19.9■□□□□ 0.78
PCDH1-201ENST00000287008 PCDHA13Q9Y5I0 950 aa19.9■□□□□ 0.78
PCDH1-201ENST00000287008 NR3C2P08235 984 aa19.9■□□□□ 0.78
PCDH1-201ENST00000287008 CLEC10AQ8IUN9 316 aa19.9■□□□□ 0.78
PCDH1-201ENST00000287008 RNF149Q8NC42 400 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms