RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 GABBR1Q9UBS5 961 aa12.74□□□□□ -0.37
SHPRH-201ENST00000275233 AATKQ6ZMQ8 1374 aa12.74□□□□□ -0.37
SHPRH-201ENST00000275233 ATP7BP35670 1465 aa12.74□□□□□ -0.37
SHPRH-201ENST00000275233 POTEB3A0JP26 581 aa12.74□□□□□ -0.37
SHPRH-201ENST00000275233 POTECB2RU33 542 aa12.74□□□□□ -0.37
SHPRH-201ENST00000275233 NDUFA10O95299 355 aa12.74□□□□□ -0.37
SHPRH-201ENST00000275233 GNAT1P11488 350 aa12.74□□□□□ -0.37
SHPRH-201ENST00000275233 JAK3P52333 1124 aa12.74□□□□□ -0.37
SHPRH-201ENST00000275233 EPHB4P54760 987 aa12.74□□□□□ -0.37
SHPRH-201ENST00000275233 POTEBQ6S5H4 581 aa12.74□□□□□ -0.37
SHPRH-201ENST00000275233 PADI6Q6TGC4 694 aa12.74□□□□□ -0.37
SHPRH-201ENST00000275233 BRINP3Q76B58 766 aa12.74□□□□□ -0.37
SHPRH-201ENST00000275233 PIDD1Q9HB75 910 aa12.74□□□□□ -0.37
SHPRH-201ENST00000275233 XAB2Q9HCS7 855 aaKnown RBP12.74□□□□□ -0.37
SHPRH-201ENST00000275233 DPYSL4O14531 572 aa12.74□□□□□ -0.37
SHPRH-201ENST00000275233 ESRRBO95718 433 aa12.74□□□□□ -0.37
SHPRH-201ENST00000275233 PBKQ96KB5 322 aa12.74□□□□□ -0.37
SHPRH-201ENST00000275233 FSD1LQ9BXM9 530 aa12.74□□□□□ -0.37
SHPRH-201ENST00000275233 RNF146Q9NTX7 359 aa12.74□□□□□ -0.37
SHPRH-201ENST00000275233 KITP10721 976 aa12.74□□□□□ -0.37
SHPRH-201ENST00000275233 OCRLQ01968 901 aa12.74□□□□□ -0.37
SHPRH-201ENST00000275233 SAAL1Q96ER3 474 aa12.74□□□□□ -0.37
SHPRH-201ENST00000275233 SPATA33Q96N06 139 aa12.74□□□□□ -0.37
SHPRH-201ENST00000275233 FAN1Q9Y2M0 1017 aa12.74□□□□□ -0.37
SHPRH-201ENST00000275233 COL15A1P39059 1388 aa12.74□□□□□ -0.37
SHPRH-201ENST00000275233 MOCS2O96007 188 aaPredicted RBP12.74□□□□□ -0.37
SHPRH-201ENST00000275233 URGCPQ8TCY9 931 aa12.74□□□□□ -0.37
SHPRH-201ENST00000275233 PCSK1NQ9UHG2 260 aa12.74□□□□□ -0.37
SHPRH-201ENST00000275233 IKBKBO14920 756 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 HUS1O60921 280 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 SCAF8Q9UPN6 1271 aaKnown RBP12.73□□□□□ -0.37
SHPRH-201ENST00000275233 NEO1Q92859 1461 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 POTEFA5A3E0 1075 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 CTNND1O60716 968 aaKnown RBP12.73□□□□□ -0.37
SHPRH-201ENST00000275233 SRGAP2O75044 1071 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 POTEIP0CG38 1075 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 CHRNA5P30532 468 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 ABCD1P33897 745 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 HADHAP40939 763 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 POTEGQ6S5H5 508 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 POTEEQ6S8J3 1075 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 TTC7AQ9ULT0 858 aaPredicted RBP12.73□□□□□ -0.37
SHPRH-201ENST00000275233 SUGT1Q9Y2Z0 365 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 ERVK-7P63135 1459 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 SIRT2Q8IXJ6 389 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 SAYSD1Q9NPB0 183 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 ADAM22Q9P0K1 906 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 AFF4Q9UHB7 1163 aaKnown RBP12.73□□□□□ -0.37
SHPRH-201ENST00000275233 PPP1R9AQ9ULJ8 1098 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 KCNQ2O43526 872 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 PALMO75781 387 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 APOEP02649 317 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 FGGP02679 453 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 PHKA2P46019 1235 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 DRP2Q13474 957 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 KLC3Q6P597 504 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 ADGRF4Q8IZF3 695 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 M0QYV0 167 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 CYP27B1O15528 508 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 RECQLP46063 649 aaPredicted RBP12.73□□□□□ -0.37
SHPRH-201ENST00000275233 TSPY1Q01534 308 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 E2F5Q15329 346 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 SNCBQ16143 134 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 PDCD7Q8N8D1 485 aaKnown RBP12.73□□□□□ -0.37
SHPRH-201ENST00000275233 OSBPL3Q9H4L5 887 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 CCDC195A0A1B0GUA6 201 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 FBXW4P57775 412 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 ZBED6P86452 979 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 GFPT1Q06210 699 aaPredicted RBP12.73□□□□□ -0.37
SHPRH-201ENST00000275233 HIPK4Q8NE63 616 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 MED4Q9NPJ6 270 aa12.73□□□□□ -0.37
SHPRH-201ENST00000275233 CPDO75976 1380 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 ZMYND12Q9H0C1 365 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 CNOT8Q9UFF9 292 aaKnown RBP12.72□□□□□ -0.37
SHPRH-201ENST00000275233 SLC13A4Q9UKG4 626 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 RCOR1Q9UKL0 485 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 HPCAL4Q9UM19 191 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 H7C1W4 665 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 LDHAP00338 332 aaKnown RBP12.72□□□□□ -0.37
SHPRH-201ENST00000275233 PRR29P0C7W0 189 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 EEF1B2P24534 225 aaKnown RBP12.72□□□□□ -0.37
SHPRH-201ENST00000275233 ZNF746Q6NUN9 644 aaPredicted RBP12.72□□□□□ -0.37
SHPRH-201ENST00000275233 ALKBH5Q6P6C2 394 aaKnown RBP12.72□□□□□ -0.37
SHPRH-201ENST00000275233 FBXL13Q8NEE6 735 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 PIP4K2CQ8TBX8 421 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 TTC17Q96AE7 1141 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 POLR3FQ9H1D9 316 aaPredicted RBP12.72□□□□□ -0.37
SHPRH-201ENST00000275233 GOLGA8QA0A0J9YX86 632 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 GOLGA8OA6NCC3 632 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 GOLGA8NF8WBI6 632 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 RWDD2BP57060 319 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 KCNA1Q09470 495 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 NNTQ13423 1086 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 SNX19Q92543 992 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 RABGGTAQ92696 567 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 N4BP2L2Q92802 583 aaPredicted RBP12.72□□□□□ -0.37
SHPRH-201ENST00000275233 FMO2Q99518 471 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 NFU1Q9UMS0 254 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 UBE4BO95155 1302 aa12.72□□□□□ -0.37
SHPRH-201ENST00000275233 VGLL3A8MV65 326 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms