RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 TCP1P17987 556 aaKnown RBP13.11□□□□□ -0.31
CHPF2-201ENST00000035307 CCND2P30279 289 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 ZNF157P51786 506 aaPredicted RBP13.11□□□□□ -0.31
CHPF2-201ENST00000035307 TMEM62Q0P6H9 643 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 GRB10Q13322 594 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 GJC2Q5T442 439 aaPredicted RBP13.11□□□□□ -0.31
CHPF2-201ENST00000035307 ADSSL1Q8N142 457 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 NACC1Q96RE7 527 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 P2RX7Q99572 595 aaKnown RBP13.11□□□□□ -0.31
CHPF2-201ENST00000035307 CHORDC1Q9UHD1 332 aaPredicted RBP13.11□□□□□ -0.31
CHPF2-201ENST00000035307 AMFRQ9UKV5 643 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 SPEF2Q9C093 1822 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 CICQ96RK0 1608 aaPredicted RBP13.11□□□□□ -0.31
CHPF2-201ENST00000035307 CCL15-CCL14A0A0B4J2E2 113 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 CCDC151A5D8V7 595 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 EML1O00423 815 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 CTNNA1P35221 906 aaKnown RBP13.11□□□□□ -0.31
CHPF2-201ENST00000035307 PRELPP51888 382 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 KCNH2Q12809 1159 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 PAK2Q13177 524 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 CCL15Q16663 113 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 CCDC26Q8TAB7 109 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 BCAS4Q8TDM0 211 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 MS4A14Q96JA4 679 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 REEP2Q9BRK0 252 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 RBAK-RBAKDNI3L0D1 243 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 hCG_1984214I3L0E3 225 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 PALMO75781 387 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 IVLP07476 585 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 PTPRAP18433 802 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 STRN3Q13033 797 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 WDR44Q5JSH3 913 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 USP37Q86T82 979 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 ZNF713Q8N859 430 aaPredicted RBP13.11□□□□□ -0.31
CHPF2-201ENST00000035307 OPTNQ96CV9 577 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 PARVGQ9HBI0 331 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 RASAL2Q9UJF2 1139 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 NFU1Q9UMS0 254 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 AFPP02771 609 aaKnown RBP13.1□□□□□ -0.31
CHPF2-201ENST00000035307 MYBP10242 640 aa13.1□□□□□ -0.31
CHPF2-201ENST00000035307 CYP2B6P20813 491 aa13.1□□□□□ -0.31
CHPF2-201ENST00000035307 OSBPP22059 807 aa13.1□□□□□ -0.31
CHPF2-201ENST00000035307 CCT5P48643 541 aa13.1□□□□□ -0.31
CHPF2-201ENST00000035307 APBA1Q02410 837 aa13.1□□□□□ -0.31
CHPF2-201ENST00000035307 SNX1Q13596 522 aa13.1□□□□□ -0.31
CHPF2-201ENST00000035307 TERF2Q15554 542 aa13.1□□□□□ -0.31
CHPF2-201ENST00000035307 SEZ6Q53EL9 994 aa13.1□□□□□ -0.31
CHPF2-201ENST00000035307 FAM83AQ86UY5 434 aa13.1□□□□□ -0.31
CHPF2-201ENST00000035307 REXO1L1PQ8IX06 675 aa13.1□□□□□ -0.31
CHPF2-201ENST00000035307 MMS19Q96T76 1030 aa13.1□□□□□ -0.31
CHPF2-201ENST00000035307 UTP11Q9Y3A2 253 aaKnown RBP13.1□□□□□ -0.31
CHPF2-201ENST00000035307 E7EVH7 732 aa13.1□□□□□ -0.31
CHPF2-201ENST00000035307 LIG4P49917 911 aa13.1□□□□□ -0.31
CHPF2-201ENST00000035307 ALKBH5Q6P6C2 394 aaKnown RBP13.1□□□□□ -0.31
CHPF2-201ENST00000035307 SESTD1Q86VW0 696 aa13.1□□□□□ -0.31
CHPF2-201ENST00000035307 GPC2Q8N158 579 aa13.1□□□□□ -0.31
CHPF2-201ENST00000035307 GPATCH11Q8N954 259 aa13.1□□□□□ -0.31
CHPF2-201ENST00000035307 BCAS3Q9H6U6 928 aa13.1□□□□□ -0.31
CHPF2-201ENST00000035307 ZNF211Q13398 564 aaPredicted RBP13.1□□□□□ -0.31
CHPF2-201ENST00000035307 STXBP2Q15833 593 aa13.1□□□□□ -0.31
CHPF2-201ENST00000035307 CEP57Q86XR8 500 aa13.1□□□□□ -0.31
CHPF2-201ENST00000035307 PLVAPQ9BX97 442 aa13.1□□□□□ -0.31
CHPF2-201ENST00000035307 EFCC1Q9HA90 598 aa13.1□□□□□ -0.31
CHPF2-201ENST00000035307 NOD1Q9Y239 953 aa13.1□□□□□ -0.31
CHPF2-201ENST00000035307 AKT3Q9Y243 479 aa13.1□□□□□ -0.31
CHPF2-201ENST00000035307 MRFAP1Q9Y605 127 aa13.1□□□□□ -0.31
CHPF2-201ENST00000035307 SLCO1A2P46721 670 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 GCLMP48507 274 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 TRIP13Q15645 432 aaPredicted RBP13.09□□□□□ -0.31
CHPF2-201ENST00000035307 KAZNQ674X7 775 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 TRIM50Q86XT4 487 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 RETREG2Q8NC44 543 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 FAM84AQ96KN4 292 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 UBE2TQ9NPD8 197 aaPredicted RBP13.09□□□□□ -0.31
CHPF2-201ENST00000035307 KMT5AQ9NQR1 393 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 MEIS2O14770 477 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 GGPS1O95749 300 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 TUBBP07437 444 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 BCRP11274 1271 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 IFNAR2P48551 515 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 LIG3P49916 1009 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 ERVK-24P63145 666 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 OTUD6AQ7L8S5 288 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 THNSL1Q8IYQ7 743 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 ANKRD42Q8N9B4 389 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 SLC7A3Q8WY07 619 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 RUSC1Q9BVN2 902 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 CPA4Q9UI42 421 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 PPP1R9AQ9ULJ8 1098 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 FGRP09769 529 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 USP11P51784 963 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 MYL7Q01449 175 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 DMP1Q13316 513 aaPredicted RBP13.09□□□□□ -0.31
CHPF2-201ENST00000035307 TUBB2AQ13885 445 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 NPY5RQ15761 445 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 LRRC71Q8N4P6 559 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 LPAR1Q92633 364 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 IL17RAQ96F46 866 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 TUBB2BQ9BVA1 445 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 ADAM21Q9UKJ8 722 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms