RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 MlxiplQ99MZ3 864 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Ubr1O70481 1757 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Mmrn1B2RPV6 1210 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Cyp3a59D3Z2W7 503 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 ZfxP17012 799 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Hspa9P38647 679 aaKnown RBP9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Cops2P61202 443 aaKnown RBP9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Ccdc127Q3TC33 260 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 TraddQ3U0V2 310 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Oog3Q3UWY1 500 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Zbtb17Q60821 794 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Sh3gl1Q62419 368 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Sv2cQ69ZS6 727 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 WlsQ6DID7 541 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Adck2Q6NSR3 617 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Adat2Q6P6J0 191 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Klhdc10Q6PAR0 439 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 BC048507Q80ZS7 89 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Vps52Q8C754 723 aaKnown RBP9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Syne4Q8CII8 388 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Gtpbp10Q8K013 366 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Tbx22Q8K402 517 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Ushbp1Q8R370 680 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Dph5Q9CWQ0 281 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 GrapQ9CX99 217 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Q9D1Z2 194 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Fsip1Q9D3V5 435 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Lrrc34Q9DAM1 415 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Usp14Q9JMA1 493 aaKnown RBP9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 4931408C20RikE9PWP9 1381 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Rtl9Q32KG4 1339 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Zfp839E9PUU5 921 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Eno1P17182 434 aaKnown RBP9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Usp4P35123 962 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Stat4P42228 749 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Abi2P62484 446 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 SlmapQ3URD3 845 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 WhrnQ80VW5 918 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Lrrc8cQ8R502 803 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Setd6Q9CWY3 473 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Spata17Q9D552 379 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 4921524L21RikQ9D5T2 438 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Cnpy3Q9DAU1 276 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Sgpp1Q9JI99 430 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Ulk4Q3V129 1303 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Col18a1P39061 1774 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Map3k7clP58500 142 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Ezh1P70351 747 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Rapgef1Q3UHC1 1224 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Rc3h1Q4VGL6 1130 aaKnown RBP9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 CcnjlQ5SRT8 387 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Klra5Q60652 266 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Rgl1Q60695 768 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Ces5aQ6AW46 575 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Armcx3Q8BHS6 379 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Csgalnact2Q8C1F4 542 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Gpr108Q91WD0 569 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Creb3l3Q91XE9 479 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Rps12P63323 132 aaKnown RBP9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Cage1Q5IR70 849 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Krt15Q61414 452 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Mpp4Q6P7F1 635 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Krt79Q8VED5 531 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Ctnnbl1Q9CWL8 563 aaKnown RBP9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Hsf2bpQ9D4G2 338 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Akr1e2Q9DCT1 301 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Pex3Q9QXY9 372 aa9.51□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Osbpl9A2A8Z1 736 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 1700018F24RikB2RW27 314 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Vmn2r78K7N6U5 853 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Eef1bO70251 225 aaKnown RBP9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Casp14O89094 257 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Igfbp4P47879 254 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Gjb6P70689 261 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 DSCC1Q14AI0 399 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Gbp8Q2V6D6 525 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Edrf1Q6GQV7 1239 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 SpidrQ8BGX7 933 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Phf20Q8BLG0 1010 aaKnown RBP9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Arhgap24Q8C4V1 747 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Plcg2Q8CIH5 1265 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Abhd8Q8R0P8 439 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Slc26a7Q8R2Z3 656 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Apbb1ipQ8R5A3 670 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Lzts2Q91YU6 671 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Cttnbp2nlQ99LJ0 638 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Nde1Q9CZA6 344 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 IkbipQ9DBZ1 373 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Gpaa1Q9WTK3 621 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Slc8a3S4R2P9 928 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Svs3aF2Z472 265 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Nkx1-1G3UXB3 402 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 AgtP11859 477 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Ppp2r5bQ6PD28 497 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 GypcQ78HU7 95 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Snip1Q8BIZ6 383 aaKnown RBP9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Scfd2Q8BTY8 684 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Parp10Q8CIE4 960 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Ophn1Q99J31 802 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Sugt1Q9CX34 336 aa9.5□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms