RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Acot5Q6Q2Z6 421 aa9.79□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Gja6Q6S5G4 283 aa9.79□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Kdm1aQ6ZQ88 853 aa9.79□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Dusp4Q8BFV3 398 aa9.79□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Q8BZJ8 459 aa9.79□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Zmynd15Q8C0R7 736 aa9.79□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Csgalnact2Q8C1F4 542 aa9.79□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Olfr395Q8VGR3 312 aa9.79□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Tab2Q99K90 693 aa9.79□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Rhobtb3Q9CTN4 611 aa9.79□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Mis18aQ9CZJ6 204 aa9.79□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Q9D5Q8 446 aa9.79□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Serpinb12Q9D7P9 423 aa9.79□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Dctpp1Q9QY93 170 aa9.79□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Tex21Q9R0U9 575 aa9.79□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Grin2dQ03391 1323 aa9.78□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 DohhA0A1Y7VJ29 135 aa9.78□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Tmem265E9Q8G3 109 aa9.78□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 GclmO09172 274 aaKnown RBP9.78□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Kpna6O35345 536 aa9.78□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Dnm2P39054 870 aaKnown RBP9.78□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Tnni3P48787 211 aa9.78□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Clcn3P51791 818 aa9.78□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Drp2Q05AA6 957 aa9.78□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Mkrn3Q60764 544 aa9.78□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Adck2Q6NSR3 617 aa9.78□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Rnf214Q8BFU3 668 aaKnown RBP9.78□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Setdb2Q8C267 713 aa9.78□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Lrrc41Q8K1C9 807 aa9.78□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Rtfdc1Q99K95 307 aa9.78□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Tnpo2Q99LG2 887 aaKnown RBP9.78□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Pbx4Q99NE9 378 aa9.78□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Chd1lQ9CXF7 900 aa9.78□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Ribc1Q9D0B8 379 aa9.78□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Olr1Q9EQ09 363 aa9.78□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Tmod3Q9JHJ0 352 aa9.78□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Gm45861A0A1B0GRY3 1923 aa9.78□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Fam184aE9PW83 1143 aa9.77□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Nmt1O70310 496 aaKnown RBP9.77□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Btg4O70552 250 aa9.77□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Pak1O88643 545 aa9.77□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Hoxc8P09025 242 aa9.77□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Scp2P32020 547 aaKnown RBP9.77□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Ly6dP35459 127 aa9.77□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Nfe2Q07279 373 aa9.77□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Capn13Q3UW68 665 aa9.77□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 LbpQ61805 481 aa9.77□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Isy1Q69ZQ2 285 aaKnown RBP9.77□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Xpnpep1Q6P1B1 623 aa9.77□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Nudt16Q6P3D0 195 aa9.77□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Ppp2r5aQ6PD03 486 aa9.77□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Ercc6lQ8BHK9 1240 aa9.77□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Mamdc2Q8CG85 686 aa9.77□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Sgpl1Q8R0X7 568 aa9.77□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Wrap53Q8VC51 532 aa9.77□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Ca9Q8VHB5 437 aa9.77□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Adcy3Q8VHH7 1145 aa9.77□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Slc14a1Q8VHL0 384 aa9.77□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 AclyQ91V92 1091 aaKnown RBP9.77□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Cd2bp2Q9CWK3 342 aaKnown RBP9.77□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 DcpsQ9DAR7 338 aa9.77□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Utp3Q9JI13 469 aaKnown RBP9.77□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 GraspQ9JJA9 392 aa9.77□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Fbxo16Q9QZM9 334 aa9.77□□□□□ -0.84
Ccdc28a-201ENSMUST00000052648 Vmn2r78K7N6U5 853 aa9.77□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 Eif3dO70194 548 aaKnown RBP9.77□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 Akr1b1P45376 316 aa9.77□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 Tmod1P49813 359 aa9.77□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 CiitaP79621 1155 aa9.77□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 Pstpip1P97814 415 aa9.77□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 Snx27Q3UHD6 539 aa9.77□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 Rbm12b2Q66JV4 834 aaKnown RBP9.77□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 Dhx40Q6PE54 779 aaKnown RBP9.77□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 PodnQ7TQ62 611 aa9.77□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 F13a1Q8BH61 732 aa9.77□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 Gpc2Q8BKV1 579 aa9.77□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 NelfbQ8C4Y3 580 aa9.77□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 Prpf31Q8CCF0 499 aaKnown RBP9.77□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 Zswim3Q8CFL8 695 aa9.77□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 Upb1Q8VC97 393 aa9.77□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 Pcdha12Q91Y18 950 aa9.77□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 Ears2Q9CXJ1 523 aa9.77□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 Taf1Q80UV9 1891 aa9.76□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 Hmx1O70218 332 aa9.76□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 GlrbP48168 496 aa9.76□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 Hoxb13P70321 286 aa9.76□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 AlcamQ61490 583 aa9.76□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 Sycp1Q62209 993 aa9.76□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 Sval3Q76I99 144 aa9.76□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 Anks1bQ8BIZ1 1259 aa9.76□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 Aldh5a1Q8BWF0 523 aa9.76□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 VcpkmtQ8C436 228 aa9.76□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 Sox30Q8CGW4 782 aa9.76□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 Exoc1Q8R3S6 894 aa9.76□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 Smc1bQ920F6 1248 aa9.76□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 Ino80bQ99PT3 375 aaKnown RBP9.76□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 Cyp2s1Q9DBX6 501 aa9.76□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 Fut2Q9JL27 347 aa9.76□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 Kif26aQ52KG5 1881 aa9.76□□□□□ -0.85
Ccdc28a-201ENSMUST00000052648 HttP42859 3119 aa9.76□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms