RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Cyth1Q9QX11 398 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Nr5a1P33242 462 aa10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Ddx42Q810A7 929 aaKnown RBP10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Rasgrp4Q8BTM9 673 aa10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Gprasp2Q8BUY8 826 aa10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Kat14Q8CID0 779 aa10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Ints9Q8K114 658 aaKnown RBP10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 4921524L21RikQ9D5T2 438 aa10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Homer2Q9QWW1 354 aa10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Ssc5dQ8BV57 1371 aa10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Trpm3Q5F4S9 1721 aa10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 DohhA0A1Y7VJ29 135 aa10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 C87977A2A958 498 aa10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Serpina16D3Z660 418 aa10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Cdc25aP48964 514 aa10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Trim71Q1PSW8 855 aaKnown RBP10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Kmt5aQ2YDW7 349 aa10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Myo1gQ5SUA5 1024 aa10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Ccna1Q61456 421 aa10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Zbtb39Q6PDK0 712 aa10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Cct8l1Q80YT3 562 aa10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Pih1h3bQ8C6P5 218 aa10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Ophn1Q99J31 802 aa10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Scyl1Q9EQC5 806 aaKnown RBP10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Snx1Q9WV80 522 aa10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Diaph3Q9Z207 1171 aa10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Gbp6A0A0G2JDV3 611 aa10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Gm43302L7N1X8 611 aa10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Cacna2d1O08532 1103 aa10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Rasgrf2P70392 1189 aa10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Ica1lQ3TY65 431 aa10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Stkld1Q80YS9 662 aa10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Slc26a6Q8CIW6 758 aa10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Mrps5Q99N87 432 aaKnown RBP10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Dach1Q9QYB2 751 aa10.66□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Nrg3O35181 713 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Nedd4P46935 887 aaKnown RBP10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Dpf2Q61103 391 aaKnown RBP10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 CpQ61147 1061 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Sh3gl1Q62419 368 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Basp1Q91XV3 226 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Spata17Q9D552 379 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Tmed2Q9R0Q3 201 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Gm11549A0A286YD83 63 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Ugt1a6bK9J7B2 531 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Cdh15P33146 784 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Atp11aP98197 1187 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Mphosph8Q3TYA6 858 aaKnown RBP10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Prmt9Q3U3W5 846 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Miga1Q4QQM5 600 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Ugt1a6Q64435 531 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Ugt1a7cQ6ZQM8 531 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Ces1Q8VCC2 565 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Ddx39aQ8VDW0 427 aaKnown RBP10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Gm11983V9GXS8 105 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Adgrb1Q3UHD1 1582 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Maml3D4QGC2 1135 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 ErmardE9Q048 622 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 A430078G23RikE9Q7Y4 484 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Axin2O88566 840 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Vti1aO89116 217 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 CnpP16330 420 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Eepd1Q3TGW2 569 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 ItgadQ3V0T4 1168 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Slc20a2Q80UP8 656 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Bpifb6Q8BU51 449 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Zc3h6Q8BYK8 1177 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Lmbrd1Q8K0B2 537 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Eif3hQ91WK2 352 aaKnown RBP10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Fkbp6Q91XW8 327 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Gipc1Q9Z0G0 333 aa10.65□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Serpinb8O08800 374 aaKnown RBP10.65□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Stag2O35638 1231 aa10.65□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Krt86P97861 486 aa10.65□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Arhgap17Q3UIA2 846 aa10.65□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Lrig2Q52KR2 1054 aa10.65□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Ppp2r5aQ6PD03 486 aa10.65□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Phf20Q8BLG0 1010 aaKnown RBP10.65□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Klhl38Q8BSF5 581 aa10.65□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Zfp449Q8CB76 518 aa10.65□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Rps6ka2Q9WUT3 733 aa10.65□□□□□ -0.71
Ldlr-201ENSMUST00000034713 B3galt4Q9Z0F0 371 aa10.65□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Kcnh2O35219 1162 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 YwhagP61982 247 aaKnown RBP10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Rbm46P86049 533 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Hoxa13Q62424 386 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Cfap36Q8C6E0 343 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Snx24Q9CRB0 169 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Tspan17Q9D7W4 270 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Fthl17aQ9DAX0 182 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Pcdh11xF6ZNL5 1338 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Gm45194A0A140LJG2 572 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Myo1eE9Q634 1107 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Zfp212G3X8R7 492 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 4933406M09RikG3XA12 479 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Exoc4O35382 975 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Lrrc4bP0C192 709 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Drd5Q8BLD9 478 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Mtmr6Q8VE11 617 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Catsper1Q91ZR5 686 aa10.64□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 19.3 ms