RNA–Protein interactions for RNA: snR57

snR57, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR57, Length 88 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR57	snR57	FUN26	P31381	517 aa		4.17	□□□□□ -1.74
snR57	snR57	ADH5	P38113	351 aa	Known RBP	4.17	□□□□□ -1.74
snR57	snR57	ECM8	P38246	354 aa		4.17	□□□□□ -1.74
snR57	snR57	YNL208W	P40159	199 aa	Known RBP	4.17	□□□□□ -1.74
snR57	snR57	MFG1	Q07684	458 aa		4.17	□□□□□ -1.74
snR57	snR57	NAG1	Q8TGN9	163 aa		4.17	□□□□□ -1.74
snR57	snR57	MRPL8	P22353	238 aa		4.16	□□□□□ -1.74
snR57	snR57	VPH1	P32563	840 aa	Known RBP	4.16	□□□□□ -1.74
snR57	snR57	LAS1	P36146	502 aa	Predicted RBP	4.16	□□□□□ -1.74
snR57	snR57	BAT1	P38891	393 aa	Known RBP	4.16	□□□□□ -1.74
snR57	snR57	DFG10	P40526	253 aa		4.16	□□□□□ -1.74
snR57	snR57	SEC27	P41811	889 aa	Known RBP	4.16	□□□□□ -1.74
snR57	snR57	YNR068C	P53754	272 aa		4.16	□□□□□ -1.74
snR57	snR57	PEX27	Q08580	376 aa		4.16	□□□□□ -1.74
snR57	snR57	NFI1	Q12216	726 aa		4.16	□□□□□ -1.74
snR57	snR57	SPO23	P33757	523 aa		4.15	□□□□□ -1.75
snR57	snR57	RET3	P53600	189 aa		4.15	□□□□□ -1.75
snR57	snR57	YET2	Q04210	160 aa		4.15	□□□□□ -1.75
snR57	snR57	YDL199C	Q12407	687 aa		4.15	□□□□□ -1.75
snR57	snR57	MSK1	P32048	576 aa		4.14	□□□□□ -1.75
snR57	snR57	YER186C	P40101	306 aa		4.14	□□□□□ -1.75
snR57	snR57	UTP6	Q02354	440 aa	Known RBP	4.14	□□□□□ -1.75
snR57	snR57	LIP2	Q06005	328 aa		4.14	□□□□□ -1.75
snR57	snR57	YPR078C	Q06813	372 aa		4.14	□□□□□ -1.75
snR57	snR57	PCL1	P24867	279 aa		4.13	□□□□□ -1.75
snR57	snR57	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
snR57	snR57	EFB1	P32471	206 aa	Known RBP	4.13	□□□□□ -1.75
snR57	snR57	OM14	P38325	134 aa		4.13	□□□□□ -1.75
snR57	snR57	LYS12	P40495	371 aa	Known RBP	4.13	□□□□□ -1.75
snR57	snR57	AIP1	P46680	615 aa	Known RBP	4.13	□□□□□ -1.75
snR57	snR57	MPS2	P53159	387 aa		4.13	□□□□□ -1.75
snR57	snR57	HAL1	Q01766	294 aa		4.13	□□□□□ -1.75
snR57	snR57	SKI8	Q02793	397 aa	Predicted RBP	4.13	□□□□□ -1.75
snR57	snR57	TSA2	Q04120	196 aa		4.13	□□□□□ -1.75
snR57	snR57	DBP9	Q06218	594 aa	Known RBP	4.13	□□□□□ -1.75
snR57	snR57	GAT3	Q07928	141 aa		4.13	□□□□□ -1.75
snR57	snR57	SFG1	Q12507	346 aa		4.13	□□□□□ -1.75
snR57	snR57	MAS2	P11914	482 aa		4.12	□□□□□ -1.75
snR57	snR57	RDS1	P25611	832 aa		4.12	□□□□□ -1.75
snR57	snR57	CDC50	P25656	391 aa		4.12	□□□□□ -1.75
snR57	snR57	RPA34	P47006	233 aa	Predicted RBP	4.12	□□□□□ -1.75
snR57	snR57	YOR338W	Q99326	363 aa		4.12	□□□□□ -1.75
snR57	snR57	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
snR57	snR57	DBR1	P24309	405 aa	Known RBP	4.11	□□□□□ -1.75
snR57	snR57	PRS1	P32895	427 aa	Known RBP	4.11	□□□□□ -1.75
snR57	snR57	UTH1	P36135	365 aa		4.11	□□□□□ -1.75
snR57	snR57	LSM12	P38828	187 aa	Known RBP	4.11	□□□□□ -1.75
snR57	snR57	LCP5	P40079	357 aa	Predicted RBP	4.11	□□□□□ -1.75
snR57	snR57	SEC9	P40357	651 aa		4.11	□□□□□ -1.75
snR57	snR57	SNL1	P40548	159 aa		4.11	□□□□□ -1.75
snR57	snR57	YNL143C	P53908	130 aa		4.11	□□□□□ -1.75
snR57	snR57	REX2	P54964	269 aa	Known RBP	4.11	□□□□□ -1.75
snR57	snR57	SHS1	Q07657	551 aa		4.11	□□□□□ -1.75
snR57	snR57	NBL1	Q3E7Y6	73 aa		4.11	□□□□□ -1.75
snR57	snR57	SPT7	P35177	1332 aa		4.11	□□□□□ -1.75
snR57	snR57	RPS18A	P0CX55	146 aa	Known RBP	4.1	□□□□□ -1.75
snR57	snR57	RPS18B	P0CX56	146 aa	Predicted RBP	4.1	□□□□□ -1.75
snR57	snR57	THR4	P16120	514 aa	Known RBP	4.1	□□□□□ -1.75
snR57	snR57	SSE1	P32589	693 aa	Known RBP	4.1	□□□□□ -1.75
snR57	snR57	VAM7	P32912	316 aa		4.1	□□□□□ -1.75
snR57	snR57	SIF2	P38262	535 aa		4.1	□□□□□ -1.75
snR57	snR57	TRF5	P48561	642 aa	Known RBP	4.1	□□□□□ -1.75
snR57	snR57	YMR010W	Q03687	405 aa		4.1	□□□□□ -1.75
snR57	snR57	FSH3	Q99369	266 aa		4.1	□□□□□ -1.75
snR57	snR57	SOD1	P00445	154 aa	Known RBP	4.09	□□□□□ -1.75
snR57	snR57	CHA1	P25379	360 aa	Known RBP	4.09	□□□□□ -1.75
snR57	snR57	TIM17	P39515	158 aa		4.09	□□□□□ -1.75
snR57	snR57	KEG1	P43614	200 aa		4.09	□□□□□ -1.75
snR57	snR57	CIN2	P46670	268 aa		4.09	□□□□□ -1.75
snR57	snR57	AIM33	Q04516	312 aa		4.09	□□□□□ -1.75
snR57	snR57	YHC1	Q05900	231 aa	Known RBP	4.09	□□□□□ -1.75
snR57	snR57	HMS1	Q12398	434 aa		4.09	□□□□□ -1.75
snR57	snR57	CTK3	P46963	296 aa	Predicted RBP	4.08	□□□□□ -1.76
snR57	snR57	AQR1	P53943	586 aa		4.08	□□□□□ -1.76
snR57	snR57	YLH47	Q06493	454 aa		4.08	□□□□□ -1.76
snR57	snR57	PRB1	P09232	635 aa		4.07	□□□□□ -1.76
snR57	snR57	RPS16A	P0CX51	143 aa	Known RBP	4.07	□□□□□ -1.76
snR57	snR57	RPS16B	P0CX52	143 aa	Known RBP	4.07	□□□□□ -1.76
snR57	snR57	MAS1	P10507	462 aa		4.07	□□□□□ -1.76
snR57	snR57	NOP1	P15646	327 aa	Known RBP	4.07	□□□□□ -1.76
snR57	snR57	ZRC1	P20107	442 aa		4.07	□□□□□ -1.76
snR57	snR57	OPI1	P21957	404 aa		4.07	□□□□□ -1.76
snR57	snR57	GRR1	P24814	1151 aa		4.07	□□□□□ -1.76
snR57	snR57	GIT1	P25346	518 aa		4.07	□□□□□ -1.76
snR57	snR57	RPL16A	P26784	199 aa	Known RBP	4.07	□□□□□ -1.76
snR57	snR57	DEP1	P31385	405 aa		4.07	□□□□□ -1.76
snR57	snR57	IES6	P32617	166 aa		4.07	□□□□□ -1.76
snR57	snR57	PFS1	P38872	237 aa		4.07	□□□□□ -1.76
snR57	snR57	CAJ1	P39101	391 aa		4.07	□□□□□ -1.76
snR57	snR57	EFM3	P47163	339 aa		4.07	□□□□□ -1.76
snR57	snR57	CUE3	P53137	624 aa	Known RBP	4.07	□□□□□ -1.76
snR57	snR57	YGR016W	P53209	190 aa		4.07	□□□□□ -1.76
snR57	snR57	YMR310C	Q04867	317 aa	Predicted RBP	4.07	□□□□□ -1.76
snR57	snR57	MCT1	Q12283	360 aa		4.07	□□□□□ -1.76
snR57	snR57	YOR012W	Q12351	137 aa		4.07	□□□□□ -1.76
snR57	snR57	AIM45	Q12480	344 aa	Known RBP	4.07	□□□□□ -1.76
snR57	snR57	COX4	P04037	155 aa		4.06	□□□□□ -1.76
snR57	snR57	HEM4	P06174	275 aa		4.06	□□□□□ -1.76
snR57	snR57	STE7	P06784	515 aa		4.06	□□□□□ -1.76
snR57	snR57	HMX1	P32339	317 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms