RNA–Protein interactions for RNA: YPR108W

RPN7, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN7, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN7YPR108W ITR1P30605 584 aa5.5□□□□□ -1.53
RPN7YPR108W ITR2P30606 609 aa5.5□□□□□ -1.53
RPN7YPR108W OAC1P32332 324 aa5.5□□□□□ -1.53
RPN7YPR108W NTH1P32356 751 aa5.5□□□□□ -1.53
RPN7YPR108W CDC12P32468 407 aaKnown RBP5.5□□□□□ -1.53
RPN7YPR108W MSN2P33748 704 aa5.5□□□□□ -1.53
RPN7YPR108W SOL2P37262 315 aa5.5□□□□□ -1.53
RPN7YPR108W NVJ1P38881 321 aa5.5□□□□□ -1.53
RPN7YPR108W RPS14BP39516 138 aaKnown RBP5.5□□□□□ -1.53
RPN7YPR108W BAT2P47176 376 aaKnown RBP5.5□□□□□ -1.53
RPN7YPR108W SPT20P50875 604 aa5.5□□□□□ -1.53
RPN7YPR108W LSG1P53145 640 aaKnown RBP5.5□□□□□ -1.53
RPN7YPR108W YGR012WP53206 393 aa5.5□□□□□ -1.53
RPN7YPR108W IGO1P53897 168 aa5.5□□□□□ -1.53
RPN7YPR108W ENA2Q01896 1091 aa5.5□□□□□ -1.53
RPN7YPR108W NTG2Q08214 380 aa5.5□□□□□ -1.53
RPN7YPR108W RTT10Q08924 1013 aa5.5□□□□□ -1.53
RPN7YPR108W GPR1Q12361 961 aa5.5□□□□□ -1.53
RPN7YPR108W TY1A-DR3Q12441 440 aa5.5□□□□□ -1.53
RPN7YPR108W YPR064WQ12492 139 aa5.5□□□□□ -1.53
RPN7YPR108W ENA5Q12691 1091 aa5.5□□□□□ -1.53
RPN7YPR108W MSB2P32334 1306 aa5.49□□□□□ -1.53
RPN7YPR108W PHO80P20052 293 aa5.49□□□□□ -1.53
RPN7YPR108W NPR1P22211 790 aa5.49□□□□□ -1.53
RPN7YPR108W RHB1P25378 209 aa5.49□□□□□ -1.53
RPN7YPR108W IDH2P28241 369 aaKnown RBP5.49□□□□□ -1.53
RPN7YPR108W RPN2P32565 945 aaKnown RBP5.49□□□□□ -1.53
RPN7YPR108W RIB7P33312 244 aa5.49□□□□□ -1.53
RPN7YPR108W DHR2P36009 735 aaPredicted RBP5.49□□□□□ -1.53
RPN7YPR108W MET30P39014 640 aa5.49□□□□□ -1.53
RPN7YPR108W FAU1P40099 211 aa5.49□□□□□ -1.53
RPN7YPR108W MPM1P40364 252 aa5.49□□□□□ -1.53
RPN7YPR108W FET5P43561 622 aa5.49□□□□□ -1.53
RPN7YPR108W ALK1P43633 760 aaKnown RBP5.49□□□□□ -1.53
RPN7YPR108W YMR099CQ03161 297 aaKnown RBP5.49□□□□□ -1.53
RPN7YPR108W ROT1Q03691 256 aa5.49□□□□□ -1.53
RPN7YPR108W VID22Q05934 901 aa5.49□□□□□ -1.53
RPN7YPR108W YLR345WQ06137 509 aa5.49□□□□□ -1.53
RPN7YPR108W YPR091CQ06833 770 aa5.49□□□□□ -1.53
RPN7YPR108W THI73Q07904 523 aa5.49□□□□□ -1.53
RPN7YPR108W RRP40Q08285 240 aaKnown RBP5.49□□□□□ -1.53
RPN7YPR108W UIP4Q08926 304 aa5.49□□□□□ -1.53
RPN7YPR108W REX3Q12090 404 aa5.49□□□□□ -1.53
RPN7YPR108W HAL9Q12180 1030 aa5.49□□□□□ -1.53
RPN7YPR108W SCM3Q12334 223 aa5.49□□□□□ -1.53
RPN7YPR108W RRP12Q12754 1228 aaKnown RBP5.49□□□□□ -1.53
RPN7YPR108W SUS1Q6WNK7 96 aa5.49□□□□□ -1.53
RPN7YPR108W QCR7P00128 127 aa5.48□□□□□ -1.53
RPN7YPR108W FUM1P08417 488 aaKnown RBP5.48□□□□□ -1.53
RPN7YPR108W URE2P23202 354 aaKnown RBP5.48□□□□□ -1.53
RPN7YPR108W RPL24BP24000 155 aaKnown RBP5.48□□□□□ -1.53
RPN7YPR108W PBN1P25580 416 aa5.48□□□□□ -1.53
RPN7YPR108W IDH1P28834 360 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
RPN7YPR108W SNC1P31109 117 aa5.48□□□□□ -1.53
RPN7YPR108W MTC2P34246 357 aa5.48□□□□□ -1.53
RPN7YPR108W BNA4P38169 460 aa5.48□□□□□ -1.53
RPN7YPR108W MBA1P38300 278 aa5.48□□□□□ -1.53
RPN7YPR108W MGE1P38523 228 aa5.48□□□□□ -1.53
RPN7YPR108W TRR2P38816 342 aa5.48□□□□□ -1.53
RPN7YPR108W BAT1P38891 393 aaKnown RBP5.48□□□□□ -1.53
RPN7YPR108W TIM17P39515 158 aa5.48□□□□□ -1.53
RPN7YPR108W SER2P42941 309 aa5.48□□□□□ -1.53
RPN7YPR108W CAK1P43568 368 aaPredicted RBP5.48□□□□□ -1.53
RPN7YPR108W JHD2P47156 728 aaPredicted RBP5.48□□□□□ -1.53
RPN7YPR108W NBP35P52920 328 aa5.48□□□□□ -1.53
RPN7YPR108W ARO8P53090 500 aaKnown RBP5.48□□□□□ -1.53
RPN7YPR108W MPC1P53157 130 aaKnown RBP5.48□□□□□ -1.53
RPN7YPR108W COS1P53822 381 aa5.48□□□□□ -1.53
RPN7YPR108W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
RPN7YPR108W YKR011CQ02209 353 aa5.48□□□□□ -1.53
RPN7YPR108W CTK1Q03957 528 aaKnown RBP5.48□□□□□ -1.53
RPN7YPR108W SIZ1Q04195 904 aa5.48□□□□□ -1.53
RPN7YPR108W YMR087WQ04299 284 aa5.48□□□□□ -1.53
RPN7YPR108W YMR310CQ04867 317 aaPredicted RBP5.48□□□□□ -1.53
RPN7YPR108W IPK1Q06667 281 aa5.48□□□□□ -1.53
RPN7YPR108W HNT3Q08702 217 aa5.48□□□□□ -1.53
RPN7YPR108W SRO7Q12038 1033 aa5.48□□□□□ -1.53
RPN7YPR108W SIA1Q12212 622 aa5.48□□□□□ -1.53
RPN7YPR108W NFI1Q12216 726 aa5.48□□□□□ -1.53
RPN7YPR108W YDL007C-AQ2V2Q0 85 aa5.48□□□□□ -1.53
RPN7YPR108W ADE5,7P07244 802 aaKnown RBP5.47□□□□□ -1.53
RPN7YPR108W GAL7P08431 366 aa5.47□□□□□ -1.53
RPN7YPR108W CWH43P25618 953 aa5.47□□□□□ -1.53
RPN7YPR108W BUD23P25627 275 aaPredicted RBP5.47□□□□□ -1.53
RPN7YPR108W KRE6P32486 720 aa5.47□□□□□ -1.53
RPN7YPR108W RSM22P36056 628 aa5.47□□□□□ -1.53
RPN7YPR108W SHE2P36068 246 aaKnown RBP RIP-Chip data5.47□□□□□ -1.53not detected
RPN7YPR108W YRO2P38079 344 aa5.47□□□□□ -1.53
RPN7YPR108W STP2P38704 541 aa5.47□□□□□ -1.53
RPN7YPR108W AIM2P39721 246 aa5.47□□□□□ -1.53
RPN7YPR108W YER184CP39961 794 aa5.47□□□□□ -1.53
RPN7YPR108W YEL020CP39994 560 aa5.47□□□□□ -1.53
RPN7YPR108W YIL067CP40514 678 aa5.47□□□□□ -1.53
RPN7YPR108W ZIM17P42844 174 aa5.47□□□□□ -1.53
RPN7YPR108W TIM54P47045 478 aa5.47□□□□□ -1.53
RPN7YPR108W TPS1Q00764 495 aaKnown RBP5.47□□□□□ -1.53
RPN7YPR108W RPC11Q04307 110 aaPredicted RBP5.47□□□□□ -1.53
RPN7YPR108W EAF1Q06337 982 aa5.47□□□□□ -1.53
RPN7YPR108W THP3Q12049 470 aaKnown RBP5.47□□□□□ -1.53
RPN7YPR108W YGK3Q12222 375 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 33.9 ms