RNA–Protein interactions for RNA: YPR066W

UBA3, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeast

Gene UBA3, Length 900 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBA3	YPR066W	INP2	Q03824	705 aa		4.83	□□□□□ -1.64
UBA3	YPR066W	BNA5	Q05979	453 aa		4.83	□□□□□ -1.64
UBA3	YPR066W	KAP95	Q06142	861 aa	Known RBP	4.83	□□□□□ -1.64
UBA3	YPR066W	APC5	Q08683	685 aa		4.83	□□□□□ -1.64
UBA3	YPR066W	MED2	Q12124	431 aa		4.83	□□□□□ -1.64
UBA3	YPR066W	RPL40A	P0CH08	128 aa	Known RBP	4.82	□□□□□ -1.64
UBA3	YPR066W	RPL40B	P0CH09	128 aa	Known RBP	4.82	□□□□□ -1.64
UBA3	YPR066W	SGE1	P33335	543 aa		4.82	□□□□□ -1.64
UBA3	YPR066W	TCD1	P38756	429 aa		4.82	□□□□□ -1.64
UBA3	YPR066W	FAU1	P40099	211 aa		4.82	□□□□□ -1.64
UBA3	YPR066W	SER33	P40510	469 aa		4.82	□□□□□ -1.64
UBA3	YPR066W	PRP24	P49960	444 aa	Known RBP	4.82	□□□□□ -1.64
UBA3	YPR066W	ATP22	P50273	684 aa	Predicted RBP	4.82	□□□□□ -1.64
UBA3	YPR066W	PEX31	P53203	462 aa		4.82	□□□□□ -1.64
UBA3	YPR066W	BTN2	P53286	410 aa		4.82	□□□□□ -1.64
UBA3	YPR066W	YNL040W	P53960	456 aa	Predicted RBP	4.82	□□□□□ -1.64
UBA3	YPR066W	HSP31	Q04432	237 aa		4.82	□□□□□ -1.64
UBA3	YPR066W	MRPL1	Q04599	285 aa		4.82	□□□□□ -1.64
UBA3	YPR066W	YMR254C	Q04838	102 aa		4.82	□□□□□ -1.64
UBA3	YPR066W	SWC7	Q06707	132 aa		4.82	□□□□□ -1.64
UBA3	YPR066W	YLR012C	Q07927	99 aa		4.82	□□□□□ -1.64
UBA3	YPR066W	CUE5	Q08412	411 aa	Known RBP	4.82	□□□□□ -1.64
UBA3	YPR066W	NRT1	Q08485	598 aa		4.82	□□□□□ -1.64
UBA3	YPR066W	DAS2	Q12084	232 aa		4.82	□□□□□ -1.64
UBA3	YPR066W	MTR10	Q99189	972 aa		4.82	□□□□□ -1.64
UBA3	YPR066W	COX3	P00420	269 aa		4.81	□□□□□ -1.64
UBA3	YPR066W	COX5A	P00424	153 aa		4.81	□□□□□ -1.64
UBA3	YPR066W	CAR1	P00812	333 aa	Known RBP	4.81	□□□□□ -1.64
UBA3	YPR066W	LEU4	P06208	619 aa	Known RBP	4.81	□□□□□ -1.64
UBA3	YPR066W	AMD1	P15274	810 aa	Known RBP	4.81	□□□□□ -1.64
UBA3	YPR066W	AAT2	P23542	418 aa	Known RBP	4.81	□□□□□ -1.64
UBA3	YPR066W	BUB3	P26449	341 aa		4.81	□□□□□ -1.64
UBA3	YPR066W	MEI4	P29467	408 aa		4.81	□□□□□ -1.64
UBA3	YPR066W	VPS17	P32913	551 aa		4.81	□□□□□ -1.64
UBA3	YPR066W	LAS1	P36146	502 aa	Predicted RBP	4.81	□□□□□ -1.64
UBA3	YPR066W	ASC1	P38011	319 aa	Known RBP	4.81	□□□□□ -1.64
UBA3	YPR066W	KAP104	P38217	918 aa	Known RBP	4.81	□□□□□ -1.64
UBA3	YPR066W	HIS2	P38635	335 aa		4.81	□□□□□ -1.64
UBA3	YPR066W	FAD1	P38913	306 aa		4.81	□□□□□ -1.64
UBA3	YPR066W	SMC2	P38989	1170 aa	Known RBP	4.81	□□□□□ -1.64
UBA3	YPR066W	PRM9	P39551	298 aa		4.81	□□□□□ -1.64
UBA3	YPR066W	YJR011C	P47086	261 aa	Predicted RBP	4.81	□□□□□ -1.64
UBA3	YPR066W	TRF5	P48561	642 aa	Known RBP	4.81	□□□□□ -1.64
UBA3	YPR066W	EOS1	P53938	366 aa		4.81	□□□□□ -1.64
UBA3	YPR066W	AQR1	P53943	586 aa		4.81	□□□□□ -1.64
UBA3	YPR066W	UBX3	Q12229	455 aa		4.81	□□□□□ -1.64
UBA3	YPR066W	SEC62	P21825	274 aa		4.8	□□□□□ -1.64
UBA3	YPR066W	PTP1	P25044	335 aa		4.8	□□□□□ -1.64
UBA3	YPR066W	KRR1	P25586	316 aa	Predicted RBP	4.8	□□□□□ -1.64
UBA3	YPR066W	CIN8	P27895	1000 aa		4.8	□□□□□ -1.64
UBA3	YPR066W	ERG1	P32476	496 aa	Known RBP	4.8	□□□□□ -1.64
UBA3	YPR066W	REC114	P32841	428 aa		4.8	□□□□□ -1.64
UBA3	YPR066W	SOR1	P35497	357 aa	Known RBP	4.8	□□□□□ -1.64
UBA3	YPR066W	SWH1	P35845	1188 aa		4.8	□□□□□ -1.64
UBA3	YPR066W	CBP4	P37267	147 aa		4.8	□□□□□ -1.64
UBA3	YPR066W	PCA1	P38360	1216 aa		4.8	□□□□□ -1.64
UBA3	YPR066W	RCK2	P38623	610 aa		4.8	□□□□□ -1.64
UBA3	YPR066W	AIM18	P38884	321 aa		4.8	□□□□□ -1.64
UBA3	YPR066W	VPS52	P39904	641 aa		4.8	□□□□□ -1.64
UBA3	YPR066W	YEL028W	P39989	153 aa		4.8	□□□□□ -1.64
UBA3	YPR066W	LCP5	P40079	357 aa	Predicted RBP	4.8	□□□□□ -1.64
UBA3	YPR066W	PAN6	P40459	309 aa		4.8	□□□□□ -1.64
UBA3	YPR066W	AIM23	P47015	356 aa		4.8	□□□□□ -1.64
UBA3	YPR066W	YJR079W	P47126	109 aa		4.8	□□□□□ -1.64
UBA3	YPR066W	KAP114	P53067	1004 aa		4.8	□□□□□ -1.64
UBA3	YPR066W	ERV41	Q04651	352 aa		4.8	□□□□□ -1.64
UBA3	YPR066W	SYO1	Q07395	620 aa		4.8	□□□□□ -1.64
UBA3	YPR066W	SOR2	Q07786	357 aa		4.8	□□□□□ -1.64
UBA3	YPR066W	PEX11	Q12462	236 aa		4.8	□□□□□ -1.64
UBA3	YPR066W	YLR462W	O13556	202 aa		4.79	□□□□□ -1.64
UBA3	YPR066W	HIS1	P00498	297 aa	Known RBP	4.79	□□□□□ -1.64
UBA3	YPR066W	SCEI	P03882	235 aa		4.79	□□□□□ -1.64
UBA3	YPR066W	MRPL8	P22353	238 aa		4.79	□□□□□ -1.64
UBA3	YPR066W	RPN2	P32565	945 aa	Known RBP	4.79	□□□□□ -1.64
UBA3	YPR066W	YHL049C	P38722	271 aa		4.79	□□□□□ -1.64
UBA3	YPR066W	PFS1	P38872	237 aa		4.79	□□□□□ -1.64
UBA3	YPR066W	TIM17	P39515	158 aa		4.79	□□□□□ -1.64
UBA3	YPR066W	YIL152W	P40455	235 aa		4.79	□□□□□ -1.64
UBA3	YPR066W	AZF1	P41696	914 aa		4.79	□□□□□ -1.64
UBA3	YPR066W	YFL064C	P43540	174 aa		4.79	□□□□□ -1.64
UBA3	YPR066W	TIM13	P53299	105 aa		4.79	□□□□□ -1.64
UBA3	YPR066W	YIF1	P53845	314 aa	Known RBP	4.79	□□□□□ -1.64
UBA3	YPR066W	ALF1	P53904	254 aa		4.79	□□□□□ -1.64
UBA3	YPR066W	YDR387C	Q04162	555 aa		4.79	□□□□□ -1.64
UBA3	YPR066W	GRX8	Q05926	109 aa		4.79	□□□□□ -1.64
UBA3	YPR066W	SAM4	Q08985	325 aa	Known RBP	4.79	□□□□□ -1.64
UBA3	YPR066W	YDR018C	Q12185	396 aa		4.79	□□□□□ -1.64
UBA3	YPR066W	YBL111C	Q3E7Y5	667 aa		4.79	□□□□□ -1.64
UBA3	YPR066W	NAG1	Q8TGN9	163 aa		4.79	□□□□□ -1.64
UBA3	YPR066W	CSF1	Q12150	2958 aa		4.79	□□□□□ -1.64
UBA3	YPR066W	UBR1	P19812	1950 aa		4.78	□□□□□ -1.64
UBA3	YPR066W	DAP2	P18962	818 aa		4.78	□□□□□ -1.64
UBA3	YPR066W	HNM1	P19807	563 aa		4.78	□□□□□ -1.64
UBA3	YPR066W	DAL81	P21657	970 aa		4.78	□□□□□ -1.64
UBA3	YPR066W	MIC60	P36112	540 aa		4.78	□□□□□ -1.64
UBA3	YPR066W	YSW1	P38280	609 aa		4.78	□□□□□ -1.64
UBA3	YPR066W	MLH1	P38920	769 aa		4.78	□□□□□ -1.64
UBA3	YPR066W	END3	P39013	349 aa		4.78	□□□□□ -1.64
UBA3	YPR066W	TRS85	P46944	698 aa		4.78	□□□□□ -1.64
UBA3	YPR066W	RLI1	Q03195	608 aa	Known RBP	4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms