RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C NSL1Q12143 216 aa6.57□□□□□ -1.36
UME1YPL139C FLO9P39712 1322 aa6.57□□□□□ -1.36
UME1YPL139C NCP1P16603 691 aaKnown RBP6.57□□□□□ -1.36
UME1YPL139C THR1P17423 357 aaKnown RBP6.57□□□□□ -1.36
UME1YPL139C CSM1P25651 190 aa6.57□□□□□ -1.36
UME1YPL139C ATS1P31386 333 aa6.57□□□□□ -1.36
UME1YPL139C YPT7P32939 208 aa6.57□□□□□ -1.36
UME1YPL139C ECM34P38728 170 aa6.57□□□□□ -1.36
UME1YPL139C MNN9P39107 395 aaKnown RBP6.57□□□□□ -1.36
UME1YPL139C MTQ1P53944 314 aa6.57□□□□□ -1.36
UME1YPL139C MMT1Q03218 510 aa6.57□□□□□ -1.36
UME1YPL139C SNX3Q08826 162 aaKnown RBP6.57□□□□□ -1.36
UME1YPL139C NPC2Q12408 173 aa6.57□□□□□ -1.36
UME1YPL139C YPR053CQ6Q5F3 151 aa6.57□□□□□ -1.36
UME1YPL139C THP2O13539 261 aaKnown RBP6.56□□□□□ -1.36
UME1YPL139C ATP2P00830 511 aaKnown RBP6.56□□□□□ -1.36
UME1YPL139C FLP1P03870 423 aa6.56□□□□□ -1.36
UME1YPL139C PHO2P07269 559 aa6.56□□□□□ -1.36
UME1YPL139C SSA3P09435 649 aaKnown RBP6.56□□□□□ -1.36
UME1YPL139C SNU114P36048 1008 aaKnown RBP6.56□□□□□ -1.36
UME1YPL139C ZTA1P38230 334 aaKnown RBP6.56□□□□□ -1.36
UME1YPL139C APE4P38821 490 aa6.56□□□□□ -1.36
UME1YPL139C HRB1P38922 454 aaKnown RBP RIP-Chip data6.56□□□□□ -1.36not detected
UME1YPL139C IAH1P41734 238 aa6.56□□□□□ -1.36
UME1YPL139C SMK1P41808 388 aa6.56□□□□□ -1.36
UME1YPL139C PRY1P47032 299 aa6.56□□□□□ -1.36
UME1YPL139C KEL2P50090 882 aa6.56□□□□□ -1.36
UME1YPL139C YNL033WP53964 284 aa6.56□□□□□ -1.36
UME1YPL139C YNL019CP53975 284 aa6.56□□□□□ -1.36
UME1YPL139C PFA5Q03289 374 aa6.56□□□□□ -1.36
UME1YPL139C GGA1Q06336 557 aa6.56□□□□□ -1.36
UME1YPL139C HDA2Q06629 674 aa6.56□□□□□ -1.36
UME1YPL139C YOR032W-AQ8TGS1 66 aa6.56□□□□□ -1.36
UME1YPL139C MF(ALPHA)1P01149 165 aa6.55□□□□□ -1.36
UME1YPL139C GPH1P06738 902 aaKnown RBP6.55□□□□□ -1.36
UME1YPL139C RPS1BP23248 255 aaKnown RBP6.55□□□□□ -1.36
UME1YPL139C CLB3P24870 427 aa6.55□□□□□ -1.36
UME1YPL139C GSH1P32477 678 aa6.55□□□□□ -1.36
UME1YPL139C KRE6P32486 720 aa6.55□□□□□ -1.36
UME1YPL139C PEX6P33760 1030 aa6.55□□□□□ -1.36
UME1YPL139C TOD6P34219 525 aa6.55□□□□□ -1.36
UME1YPL139C YOR062CP36025 268 aa6.55□□□□□ -1.36
UME1YPL139C GDT1P38301 280 aaPredicted RBP6.55□□□□□ -1.36
UME1YPL139C TDP1P38319 544 aa6.55□□□□□ -1.36
UME1YPL139C NSG1P38837 291 aa6.55□□□□□ -1.36
UME1YPL139C CHS7P38843 316 aa6.55□□□□□ -1.36
UME1YPL139C AAD10P47182 288 aa6.55□□□□□ -1.36
UME1YPL139C BSC5P53755 489 aa6.55□□□□□ -1.36
UME1YPL139C YNL181WP53878 407 aa6.55□□□□□ -1.36
UME1YPL139C CUZ1P53899 274 aa6.55□□□□□ -1.36
UME1YPL139C PLM2Q04383 521 aa6.55□□□□□ -1.36
UME1YPL139C YKU80Q04437 629 aa6.55□□□□□ -1.36
UME1YPL139C MFG1Q07684 458 aa6.55□□□□□ -1.36
UME1YPL139C COS7Q07788 383 aa6.55□□□□□ -1.36
UME1YPL139C FMP40Q08968 688 aaPredicted RBP6.55□□□□□ -1.36
UME1YPL139C BAG7Q12128 409 aa6.55□□□□□ -1.36
UME1YPL139C KSS1P14681 368 aa6.54□□□□□ -1.36
UME1YPL139C ERD1P16151 362 aa6.54□□□□□ -1.36
UME1YPL139C ERG8P24521 451 aa6.54□□□□□ -1.36
UME1YPL139C CTR86P25355 563 aa6.54□□□□□ -1.36
UME1YPL139C PTC6P25646 442 aa6.54□□□□□ -1.36
UME1YPL139C MTC2P34246 357 aa6.54□□□□□ -1.36
UME1YPL139C BPL1P48445 690 aaPredicted RBP6.54□□□□□ -1.36
UME1YPL139C GPI8P49018 411 aa6.54□□□□□ -1.36
UME1YPL139C RPN14P53196 417 aa6.54□□□□□ -1.36
UME1YPL139C BUD9P53226 547 aa6.54□□□□□ -1.36
UME1YPL139C DCP2P53550 970 aaKnown RBP6.54□□□□□ -1.36
UME1YPL139C DCR2Q05924 578 aa6.54□□□□□ -1.36
UME1YPL139C YLR446WQ06204 433 aa6.54□□□□□ -1.36
UME1YPL139C ARV1Q06541 321 aa6.54□□□□□ -1.36
UME1YPL139C YOS9Q99220 542 aa6.54□□□□□ -1.36
UME1YPL139C GAL3P13045 520 aa6.53□□□□□ -1.36
UME1YPL139C RAD51P25454 400 aa6.53□□□□□ -1.36
UME1YPL139C PBN1P25580 416 aa6.53□□□□□ -1.36
UME1YPL139C ERG9P29704 444 aa6.53□□□□□ -1.36
UME1YPL139C MRP8P35719 219 aa6.53□□□□□ -1.36
UME1YPL139C TSL1P38427 1098 aaKnown RBP6.53□□□□□ -1.36
UME1YPL139C RIX1P38883 763 aaPredicted RBP6.53□□□□□ -1.36
UME1YPL139C YHR218WP38899 603 aa6.53□□□□□ -1.36
UME1YPL139C MPM1P40364 252 aa6.53□□□□□ -1.36
UME1YPL139C MAM33P40513 266 aa6.53□□□□□ -1.36
UME1YPL139C YIL067CP40514 678 aa6.53□□□□□ -1.36
UME1YPL139C HSV2P50079 448 aaPredicted RBP6.53□□□□□ -1.36
UME1YPL139C COS6P53344 381 aa6.53□□□□□ -1.36
UME1YPL139C PDR16P53860 351 aaKnown RBP6.53□□□□□ -1.36
UME1YPL139C PRP3Q03338 469 aaPredicted RBP6.53□□□□□ -1.36
UME1YPL139C RSN1Q03516 953 aa6.53□□□□□ -1.36
UME1YPL139C PLB2Q03674 706 aa6.53□□□□□ -1.36
UME1YPL139C ERB1Q04660 807 aaKnown RBP6.53□□□□□ -1.36
UME1YPL139C SSQ1Q05931 657 aaPredicted RBP6.53□□□□□ -1.36
UME1YPL139C GRC3Q07845 632 aa6.53□□□□□ -1.36
UME1YPL139C YDL211CQ12121 372 aa6.53□□□□□ -1.36
UME1YPL139C YRA1Q12159 226 aaKnown RBP6.53□□□□□ -1.36
UME1YPL139C WTM1Q12363 437 aaKnown RBP6.53□□□□□ -1.36
UME1YPL139C SWM1Q12379 170 aa6.53□□□□□ -1.36
UME1YPL139C Q0144Q9ZZW2 109 aa6.53□□□□□ -1.36
UME1YPL139C YFR010W-AP0C5N0 62 aa6.52□□□□□ -1.37
UME1YPL139C RPB10P22139 70 aa6.52□□□□□ -1.37
UME1YPL139C DBP2P24783 546 aaKnown RBP6.52□□□□□ -1.37
UME1YPL139C DMC1P25453 334 aa6.52□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms