RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W PDR16P53860 351 aaKnown RBP3.99□□□□□ -1.77
VPS28YPL065W AIM33Q04516 312 aa3.99□□□□□ -1.77
VPS28YPL065W LOT6Q07923 191 aa3.99□□□□□ -1.77
VPS28YPL065W GAT3Q07928 141 aa3.99□□□□□ -1.77
VPS28YPL065W HXT1P32465 570 aa3.98□□□□□ -1.77
VPS28YPL065W ECM8P38246 354 aa3.98□□□□□ -1.77
VPS28YPL065W LYS12P40495 371 aaKnown RBP3.98□□□□□ -1.77
VPS28YPL065W EGT2P42835 1041 aa3.98□□□□□ -1.77
VPS28YPL065W FYV8P46949 817 aaKnown RBP3.98□□□□□ -1.77
VPS28YPL065W MST27P53176 234 aa3.98□□□□□ -1.77
VPS28YPL065W YGL039WP53183 348 aaKnown RBP3.98□□□□□ -1.77
VPS28YPL065W PRM6Q04705 352 aa3.98□□□□□ -1.77
VPS28YPL065W NBL1Q3E7Y6 73 aa3.98□□□□□ -1.77
VPS28YPL065W YOR338WQ99326 363 aa3.98□□□□□ -1.77
VPS28YPL065W TAL1P15019 335 aaKnown RBP3.97□□□□□ -1.77
VPS28YPL065W TRX1P22217 103 aaKnown RBP3.97□□□□□ -1.77
VPS28YPL065W RAD5P32849 1169 aaPredicted RBP3.97□□□□□ -1.77
VPS28YPL065W YIL089WP40500 205 aa3.97□□□□□ -1.77
VPS28YPL065W SEC27P41811 889 aaKnown RBP3.97□□□□□ -1.77
VPS28YPL065W CRH1P53301 507 aa3.97□□□□□ -1.77
VPS28YPL065W YPR091CQ06833 770 aa3.97□□□□□ -1.77
VPS28YPL065W MFG1Q07684 458 aa3.97□□□□□ -1.77
VPS28YPL065W RBD2Q12270 262 aa3.97□□□□□ -1.77
VPS28YPL065W AIM45Q12480 344 aaKnown RBP3.97□□□□□ -1.77
VPS28YPL065W FSH3Q99369 266 aa3.97□□□□□ -1.77
VPS28YPL065W RPS16AP0CX51 143 aaKnown RBP3.96□□□□□ -1.78
VPS28YPL065W RPS16BP0CX52 143 aaKnown RBP3.96□□□□□ -1.78
VPS28YPL065W THR4P16120 514 aaKnown RBP3.96□□□□□ -1.78
VPS28YPL065W RVS161P25343 265 aaKnown RBP3.96□□□□□ -1.78
VPS28YPL065W AIM10P39965 576 aaKnown RBP3.96□□□□□ -1.78
VPS28YPL065W YFR057WP43625 151 aa3.96□□□□□ -1.78
VPS28YPL065W BIR1P47134 954 aa3.96□□□□□ -1.78
VPS28YPL065W BNS1P50084 137 aa3.96□□□□□ -1.78
VPS28YPL065W ALF1P53904 254 aa3.96□□□□□ -1.78
VPS28YPL065W PLP2Q12017 286 aa3.96□□□□□ -1.78
VPS28YPL065W FCY22Q12119 530 aa3.96□□□□□ -1.78
VPS28YPL065W MAS1P10507 462 aa3.95□□□□□ -1.78
VPS28YPL065W MRPL8P22353 238 aa3.95□□□□□ -1.78
VPS28YPL065W KRR1P25586 316 aaPredicted RBP3.95□□□□□ -1.78
VPS28YPL065W PTI1P39927 425 aaPredicted RBP3.95□□□□□ -1.78
VPS28YPL065W PRM1P53835 661 aa3.95□□□□□ -1.78
VPS28YPL065W YMR310CQ04867 317 aaPredicted RBP3.95□□□□□ -1.78
VPS28YPL065W JID1Q12350 301 aa3.95□□□□□ -1.78
VPS28YPL065W HTZ1Q12692 134 aaKnown RBP3.95□□□□□ -1.78
VPS28YPL065W VMA2P16140 517 aaKnown RBP3.94□□□□□ -1.78
VPS28YPL065W RPB5P20434 215 aa3.94□□□□□ -1.78
VPS28YPL065W SPO23P33757 523 aa3.94□□□□□ -1.78
VPS28YPL065W LCP5P40079 357 aaPredicted RBP3.94□□□□□ -1.78
VPS28YPL065W CTK3P46963 296 aaPredicted RBP3.94□□□□□ -1.78
VPS28YPL065W SHE4P51534 789 aa3.94□□□□□ -1.78
VPS28YPL065W SMP3Q04174 516 aa3.94□□□□□ -1.78
VPS28YPL065W SHS1Q07657 551 aa3.94□□□□□ -1.78
VPS28YPL065W TMC1Q08422 150 aaPredicted RBP3.94□□□□□ -1.78
VPS28YPL065W PCL9Q12477 304 aa3.94□□□□□ -1.78
VPS28YPL065W MEX67Q99257 599 aaKnown RBP3.94□□□□□ -1.78
VPS28YPL065W MAS2P11914 482 aa3.93□□□□□ -1.78
VPS28YPL065W GRR1P24814 1151 aa3.93□□□□□ -1.78
VPS28YPL065W FUN26P31381 517 aa3.93□□□□□ -1.78
VPS28YPL065W EFB1P32471 206 aaKnown RBP3.93□□□□□ -1.78
VPS28YPL065W VAM7P32912 316 aa3.93□□□□□ -1.78
VPS28YPL065W ANR2P36090 516 aaPredicted RBP3.93□□□□□ -1.78
VPS28YPL065W RTC2P38279 296 aa3.93□□□□□ -1.78
VPS28YPL065W BAT1P38891 393 aaKnown RBP3.93□□□□□ -1.78
VPS28YPL065W POP2P39008 433 aa3.93□□□□□ -1.78
VPS28YPL065W MIG3P39943 394 aa3.93□□□□□ -1.78
VPS28YPL065W SEC9P40357 651 aa3.93□□□□□ -1.78
VPS28YPL065W ATG18P43601 500 aa3.93□□□□□ -1.78
VPS28YPL065W YLH47Q06493 454 aa3.93□□□□□ -1.78
VPS28YPL065W GLE1Q12315 538 aa3.93□□□□□ -1.78
VPS28YPL065W WTM1Q12363 437 aaKnown RBP3.93□□□□□ -1.78
VPS28YPL065W YDL199CQ12407 687 aa3.93□□□□□ -1.78
VPS28YPL065W CKI1P20485 582 aa3.92□□□□□ -1.78
VPS28YPL065W HXT2P23585 541 aa3.92□□□□□ -1.78
VPS28YPL065W HMX1P32339 317 aa3.92□□□□□ -1.78
VPS28YPL065W SLX1P38324 304 aa3.92□□□□□ -1.78
VPS28YPL065W OXA1P39952 402 aa3.92□□□□□ -1.78
VPS28YPL065W YNL208WP40159 199 aaKnown RBP3.92□□□□□ -1.78
VPS28YPL065W CLD1P53264 445 aa3.92□□□□□ -1.78
VPS28YPL065W HST1P53685 503 aa3.92□□□□□ -1.78
VPS28YPL065W SPH1Q06160 661 aa3.92□□□□□ -1.78
VPS28YPL065W ARR1Q06596 294 aa3.92□□□□□ -1.78
VPS28YPL065W YDL114WQ07530 308 aa3.92□□□□□ -1.78
VPS28YPL065W NAG1Q8TGN9 163 aa3.92□□□□□ -1.78
VPS28YPL065W DET1Q99288 334 aaKnown RBP3.92□□□□□ -1.78
VPS28YPL065W CHA1P25379 360 aaKnown RBP3.91□□□□□ -1.78
VPS28YPL065W ZUO1P32527 433 aaKnown RBP3.91□□□□□ -1.78
VPS28YPL065W SSE1P32589 693 aaKnown RBP3.91□□□□□ -1.78
VPS28YPL065W UTP18P40362 594 aaPredicted RBP3.91□□□□□ -1.78
VPS28YPL065W CIN2P46670 268 aa3.91□□□□□ -1.78
VPS28YPL065W SHY1P53266 389 aa3.91□□□□□ -1.78
VPS28YPL065W REX2P54964 269 aaKnown RBP3.91□□□□□ -1.78
VPS28YPL065W YHC1Q05900 231 aaKnown RBP3.91□□□□□ -1.78
VPS28YPL065W CMS1Q07897 291 aaKnown RBP3.91□□□□□ -1.78
VPS28YPL065W YOL075CQ08234 1294 aa3.91□□□□□ -1.78
VPS28YPL065W FAR1P21268 830 aa3.9□□□□□ -1.79
VPS28YPL065W AAT2P23542 418 aaKnown RBP3.9□□□□□ -1.79
VPS28YPL065W NUP2P32499 720 aa3.9□□□□□ -1.79
VPS28YPL065W YHR122WP38829 231 aa3.9□□□□□ -1.79
VPS28YPL065W ATG7P38862 630 aa3.9□□□□□ -1.79
VPS28YPL065W ALP1P38971 573 aa3.9□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms