RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W YSC83P32792 385 aa3.4□□□□□ -1.87
VAM3YOR106W ECT1P33412 323 aa3.4□□□□□ -1.87
VAM3YOR106W PEX22P39718 180 aa3.4□□□□□ -1.87
VAM3YOR106W PMT5P52867 743 aa3.4□□□□□ -1.87
VAM3YOR106W VHT1P53241 593 aa3.4□□□□□ -1.87
VAM3YOR106W RRN9P53437 365 aa3.4□□□□□ -1.87
VAM3YOR106W ERO1Q03103 563 aa3.4□□□□□ -1.87
VAM3YOR106W URC2Q04411 772 aa3.4□□□□□ -1.87
VAM3YOR106W YHC1Q05900 231 aaKnown RBP3.4□□□□□ -1.87
VAM3YOR106W RAX2Q12465 1220 aa3.4□□□□□ -1.87
VAM3YOR106W RPL21AQ02753 160 aaKnown RBP3.39□□□□□ -1.87
VAM3YOR106W YDR541CQ03049 344 aa3.39□□□□□ -1.87
VAM3YOR106W RPL21BQ12672 160 aaKnown RBP3.39□□□□□ -1.87
VAM3YOR106W RPS18AP0CX55 146 aaKnown RBP3.38□□□□□ -1.87
VAM3YOR106W RPS18BP0CX56 146 aaPredicted RBP3.38□□□□□ -1.87
VAM3YOR106W PFF1P38244 976 aa3.38□□□□□ -1.87
VAM3YOR106W SRP72P38688 640 aaKnown RBP3.38□□□□□ -1.87
VAM3YOR106W BUD27P43573 796 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
VAM3YOR106W ATP22P50273 684 aaPredicted RBP3.38□□□□□ -1.87
VAM3YOR106W MSC3Q05812 728 aa3.38□□□□□ -1.87
VAM3YOR106W LDS2Q08218 356 aa3.38□□□□□ -1.87
VAM3YOR106W ASP3-2P0CX77 362 aa3.37□□□□□ -1.87
VAM3YOR106W ASP3-3P0CX78 362 aa3.37□□□□□ -1.87
VAM3YOR106W ASP3-4P0CX79 362 aa3.37□□□□□ -1.87
VAM3YOR106W ASP3-1P0CZ17 362 aa3.37□□□□□ -1.87
VAM3YOR106W RTT102P53330 157 aa3.37□□□□□ -1.87
VAM3YOR106W AAD15Q08361 143 aa3.37□□□□□ -1.87
VAM3YOR106W PRM7Q12459 698 aa3.37□□□□□ -1.87
VAM3YOR106W SMC6Q12749 1114 aa3.37□□□□□ -1.87
VAM3YOR106W PUT4P15380 627 aa3.36□□□□□ -1.87
VAM3YOR106W DTR1P38125 572 aa3.36□□□□□ -1.87
VAM3YOR106W SEC27P41811 889 aaKnown RBP3.36□□□□□ -1.87
VAM3YOR106W PRP38Q00723 242 aaPredicted RBP3.36□□□□□ -1.87
VAM3YOR106W CIK1Q01649 594 aa3.36□□□□□ -1.87
VAM3YOR106W GYL1Q04322 720 aa3.36□□□□□ -1.87
VAM3YOR106W PIN3Q06449 215 aa3.36□□□□□ -1.87
VAM3YOR106W NDL1Q06568 189 aa3.36□□□□□ -1.87
VAM3YOR106W RPS19AP07280 144 aaKnown RBP3.35□□□□□ -1.87
VAM3YOR106W RPS19BP07281 144 aaPredicted RBP3.35□□□□□ -1.87
VAM3YOR106W KAP104P38217 918 aaKnown RBP3.35□□□□□ -1.87
VAM3YOR106W CHL4P38907 458 aa3.35□□□□□ -1.87
VAM3YOR106W CWC22P53333 577 aaKnown RBP3.35□□□□□ -1.87
VAM3YOR106W HST1P53685 503 aa3.35□□□□□ -1.87
VAM3YOR106W YDR115WQ04598 105 aa3.35□□□□□ -1.87
VAM3YOR106W YLR177WQ06251 628 aa3.35□□□□□ -1.87
VAM3YOR106W MCT1Q12283 360 aa3.35□□□□□ -1.87
VAM3YOR106W MAS2P11914 482 aa3.34□□□□□ -1.87
VAM3YOR106W TOA2P32774 122 aa3.34□□□□□ -1.87
VAM3YOR106W ABM1P47146 123 aa3.34□□□□□ -1.87
VAM3YOR106W MEH1Q02205 184 aa3.34□□□□□ -1.87
VAM3YOR106W SPE3Q12074 293 aaKnown RBP3.34□□□□□ -1.87
VAM3YOR106W SFM1Q12314 213 aa3.34□□□□□ -1.87
VAM3YOR106W CCH1P50077 2039 aa3.33□□□□□ -1.88
VAM3YOR106W TPI1P00942 248 aaKnown RBP3.33□□□□□ -1.88
VAM3YOR106W RPL16AP26784 199 aaKnown RBP3.33□□□□□ -1.88
VAM3YOR106W FMT1P32785 401 aa3.33□□□□□ -1.88
VAM3YOR106W WSS1P38838 269 aa3.33□□□□□ -1.88
VAM3YOR106W MNL1P38888 796 aa3.33□□□□□ -1.88
VAM3YOR106W KEG1P43614 200 aa3.33□□□□□ -1.88
VAM3YOR106W VAC7P53950 1165 aa3.33□□□□□ -1.88
VAM3YOR106W YPS3Q12303 508 aa3.33□□□□□ -1.88
VAM3YOR106W LDB17Q12342 491 aa3.33□□□□□ -1.88
VAM3YOR106W RNA1P11745 407 aaKnown RBP3.32□□□□□ -1.88
VAM3YOR106W CHA1P25379 360 aaKnown RBP3.32□□□□□ -1.88
VAM3YOR106W LDS1P31379 325 aa3.32□□□□□ -1.88
VAM3YOR106W PFS2P42841 465 aaKnown RBP3.32□□□□□ -1.88
VAM3YOR106W CIN2P46670 268 aa3.32□□□□□ -1.88
VAM3YOR106W VEL1P53058 206 aa3.32□□□□□ -1.88
VAM3YOR106W FSH2Q05015 223 aa3.32□□□□□ -1.88
VAM3YOR106W SRO7Q12038 1033 aa3.32□□□□□ -1.88
VAM3YOR106W TOA1P32773 286 aa3.31□□□□□ -1.88
VAM3YOR106W PDC2P32896 925 aa3.31□□□□□ -1.88
VAM3YOR106W ECM34P38728 170 aa3.31□□□□□ -1.88
VAM3YOR106W SEH1P53011 349 aaKnown RBP3.31□□□□□ -1.88
VAM3YOR106W RPN5Q12250 445 aaKnown RBP3.31□□□□□ -1.88
VAM3YOR106W HIF1Q12373 385 aa3.31□□□□□ -1.88
VAM3YOR106W HEM4P06174 275 aa3.3□□□□□ -1.88
VAM3YOR106W ANP1P32629 500 aa3.3□□□□□ -1.88
VAM3YOR106W PXA2P34230 853 aa3.3□□□□□ -1.88
VAM3YOR106W COS9P36034 407 aa3.3□□□□□ -1.88
VAM3YOR106W YBR241CP38142 488 aa3.3□□□□□ -1.88
VAM3YOR106W HEM14P40012 539 aa3.3□□□□□ -1.88
VAM3YOR106W ASN2P49090 572 aaKnown RBP3.3□□□□□ -1.88
VAM3YOR106W RNH201P53942 307 aa3.3□□□□□ -1.88
VAM3YOR106W TIR4Q12218 487 aaPredicted RBP3.3□□□□□ -1.88
VAM3YOR106W MRPL8P22353 238 aa3.29□□□□□ -1.88
VAM3YOR106W VMA8P32610 256 aaKnown RBP3.29□□□□□ -1.88
VAM3YOR106W SPP381P38282 291 aaPredicted RBP3.29□□□□□ -1.88
VAM3YOR106W YML6P51998 286 aa3.29□□□□□ -1.88
VAM3YOR106W YGR067CP53243 804 aa3.29□□□□□ -1.88
VAM3YOR106W NOP6Q07623 225 aaKnown RBP3.29□□□□□ -1.88
VAM3YOR106W YDL109CQ12103 647 aa3.29□□□□□ -1.88
VAM3YOR106W BI3Q9ZZW7 517 aa3.29□□□□□ -1.88
VAM3YOR106W RPL1AP0CX43 217 aaKnown RBP3.28□□□□□ -1.88
VAM3YOR106W RPL1BP0CX44 217 aaKnown RBP3.28□□□□□ -1.88
VAM3YOR106W EPT1P22140 391 aa3.28□□□□□ -1.88
VAM3YOR106W RRP7P25368 297 aaPredicted RBP3.28□□□□□ -1.88
VAM3YOR106W YJL055WP47044 245 aa3.28□□□□□ -1.88
VAM3YOR106W IPK1Q06667 281 aa3.28□□□□□ -1.88
VAM3YOR106W SLF1Q12034 447 aaKnown RBP3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms