RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W SHS1Q07657 551 aa3.56□□□□□ -1.84
VPS27YNR006W YOR338WQ99326 363 aa3.56□□□□□ -1.84
VPS27YNR006W SSK22P25390 1331 aaPredicted RBP3.56□□□□□ -1.84
VPS27YNR006W SPO11P23179 398 aa3.56□□□□□ -1.84
VPS27YNR006W SKG6P32900 734 aaPredicted RBP3.56□□□□□ -1.84
VPS27YNR006W YCR041WP37265 110 aa3.56□□□□□ -1.84
VPS27YNR006W SHO1P40073 367 aa3.56□□□□□ -1.84
VPS27YNR006W ABM1P47146 123 aa3.56□□□□□ -1.84
VPS27YNR006W TRF5P48561 642 aaKnown RBP3.56□□□□□ -1.84
VPS27YNR006W ENT5Q03769 411 aaKnown RBP3.56□□□□□ -1.84
VPS27YNR006W CAC2Q04199 468 aa3.56□□□□□ -1.84
VPS27YNR006W BNA5Q05979 453 aa3.56□□□□□ -1.84
VPS27YNR006W APC2Q12440 853 aa3.56□□□□□ -1.84
VPS27YNR006W GAL4P04386 881 aa3.55□□□□□ -1.84
VPS27YNR006W ZIP1P31111 875 aa3.55□□□□□ -1.84
VPS27YNR006W DOA1P36037 715 aa3.55□□□□□ -1.84
VPS27YNR006W RPC37P36121 282 aa3.55□□□□□ -1.84
VPS27YNR006W LYS1P38998 373 aaRIP-Chip data3.55□□□□□ -1.84not detected
VPS27YNR006W CCT4P39078 528 aaKnown RBP3.55□□□□□ -1.84
VPS27YNR006W ISC1P40015 477 aaKnown RBP3.55□□□□□ -1.84
VPS27YNR006W HAM1P47119 197 aaKnown RBP3.55□□□□□ -1.84
VPS27YNR006W GMC2Q06201 188 aa3.55□□□□□ -1.84
VPS27YNR006W CMS1Q07897 291 aaKnown RBP3.55□□□□□ -1.84
VPS27YNR006W REX4Q08237 289 aa3.55□□□□□ -1.84
VPS27YNR006W SIA1Q12212 622 aa3.55□□□□□ -1.84
VPS27YNR006W YOS9Q99220 542 aa3.55□□□□□ -1.84
VPS27YNR006W TY1B-DR4Q07793 1604 aa3.55□□□□□ -1.84
VPS27YNR006W TCB3Q03640 1545 aaKnown RBP3.55□□□□□ -1.84
VPS27YNR006W TPK3P05986 398 aa3.54□□□□□ -1.84
VPS27YNR006W AMD1P15274 810 aaKnown RBP3.54□□□□□ -1.84
VPS27YNR006W APA2P22108 325 aa3.54□□□□□ -1.84
VPS27YNR006W RRT12P25381 491 aa3.54□□□□□ -1.84
VPS27YNR006W MEI5P32489 222 aa3.54□□□□□ -1.84
VPS27YNR006W YKL071WP36086 256 aa3.54□□□□□ -1.84
VPS27YNR006W AIM29P36154 155 aa3.54□□□□□ -1.84
VPS27YNR006W IST2P38250 946 aa3.54□□□□□ -1.84
VPS27YNR006W HIS2P38635 335 aa3.54□□□□□ -1.84
VPS27YNR006W BIG1P38813 335 aa3.54□□□□□ -1.84
VPS27YNR006W FAA2P39518 744 aa3.54□□□□□ -1.84
VPS27YNR006W YRB2P40517 327 aa3.54□□□□□ -1.84
VPS27YNR006W SSN8P47821 323 aa3.54□□□□□ -1.84
VPS27YNR006W NOP13P53883 403 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
VPS27YNR006W SLT2Q00772 484 aa3.54□□□□□ -1.84
VPS27YNR006W MSS11Q03825 758 aa3.54□□□□□ -1.84
VPS27YNR006W RVB1Q03940 463 aaKnown RBP3.54□□□□□ -1.84
VPS27YNR006W SPA2P23201 1466 aaKnown RBP3.54□□□□□ -1.84
VPS27YNR006W LSB5P25369 354 aa3.54□□□□□ -1.84
VPS27YNR006W VMA5P31412 392 aaKnown RBP3.54□□□□□ -1.84
VPS27YNR006W PHD1P36093 366 aa3.54□□□□□ -1.84
VPS27YNR006W ECM4P36156 370 aa3.54□□□□□ -1.84
VPS27YNR006W RIM2P38127 377 aa3.54□□□□□ -1.84
VPS27YNR006W MMS21P38632 267 aa3.54□□□□□ -1.84
VPS27YNR006W OSH3P38713 996 aaKnown RBP3.54□□□□□ -1.84
VPS27YNR006W TAF6P53040 516 aa3.54□□□□□ -1.84
VPS27YNR006W OKP1P53298 406 aa3.54□□□□□ -1.84
VPS27YNR006W FRE4P53746 719 aa3.54□□□□□ -1.84
VPS27YNR006W CTL1Q03220 320 aaKnown RBP3.54□□□□□ -1.84
VPS27YNR006W YMR209CQ03648 457 aa3.54□□□□□ -1.84
VPS27YNR006W PAM18Q07914 168 aa3.54□□□□□ -1.84
VPS27YNR006W SDO1Q07953 250 aaKnown RBP3.54□□□□□ -1.84
VPS27YNR006W THI20Q08224 551 aa3.54□□□□□ -1.84
VPS27YNR006W RAD7P06779 565 aa3.53□□□□□ -1.84
VPS27YNR006W CUE2P36075 443 aaKnown RBP3.53□□□□□ -1.84
VPS27YNR006W SPC34P36131 295 aa3.53□□□□□ -1.84
VPS27YNR006W PRS4P38063 326 aaPredicted RBP3.53□□□□□ -1.84
VPS27YNR006W LDB7P38210 180 aa3.53□□□□□ -1.84
VPS27YNR006W YHR182WP38870 785 aa3.53□□□□□ -1.84
VPS27YNR006W DHH1P39517 506 aaKnown RBP3.53□□□□□ -1.84
VPS27YNR006W YCH1P42937 148 aa3.53□□□□□ -1.84
VPS27YNR006W YFL040WP43562 540 aa3.53□□□□□ -1.84
VPS27YNR006W GAT1P43574 510 aa3.53□□□□□ -1.84
VPS27YNR006W COX16P47081 118 aa3.53□□□□□ -1.84
VPS27YNR006W MKC7P53379 596 aa3.53□□□□□ -1.84
VPS27YNR006W ARK1P53974 638 aa3.53□□□□□ -1.84
VPS27YNR006W RLI1Q03195 608 aaKnown RBP3.53□□□□□ -1.84
VPS27YNR006W GLO2Q05584 274 aa3.53□□□□□ -1.84
VPS27YNR006W TPO3Q06451 622 aa3.53□□□□□ -1.84
VPS27YNR006W GRS2Q06817 618 aa3.53□□□□□ -1.84
VPS27YNR006W SGT1Q08446 395 aa3.53□□□□□ -1.84
VPS27YNR006W BNR1P40450 1375 aa3.52□□□□□ -1.85
VPS27YNR006W RHO1P06780 209 aaKnown RBP3.52□□□□□ -1.85
VPS27YNR006W YPK2P18961 677 aa3.52□□□□□ -1.85
VPS27YNR006W YSR3P23501 404 aa3.52□□□□□ -1.85
VPS27YNR006W POP5P28005 173 aa3.52□□□□□ -1.85
VPS27YNR006W PRR1P28708 518 aa3.52□□□□□ -1.85
VPS27YNR006W TMT1P32643 299 aa3.52□□□□□ -1.85
VPS27YNR006W COX13P32799 129 aa3.52□□□□□ -1.85
VPS27YNR006W PPZ2P33329 710 aa3.52□□□□□ -1.85
VPS27YNR006W LOS1P33418 1100 aaPredicted RBP3.52□□□□□ -1.85
VPS27YNR006W SKT5P34226 696 aa3.52□□□□□ -1.85
VPS27YNR006W YBR056WP38081 501 aa3.52□□□□□ -1.85
VPS27YNR006W COA1P40452 197 aa3.52□□□□□ -1.85
VPS27YNR006W CSM2P40465 213 aa3.52□□□□□ -1.85
VPS27YNR006W YGR210CP42942 411 aa3.52□□□□□ -1.85
VPS27YNR006W AGP3P43548 558 aa3.52□□□□□ -1.85
VPS27YNR006W AIM24P47127 394 aa3.52□□□□□ -1.85
VPS27YNR006W PXR1P53335 271 aaPredicted RBP3.52□□□□□ -1.85
VPS27YNR006W YNR048WP53740 393 aa3.52□□□□□ -1.85
VPS27YNR006W BET4Q00618 327 aa3.52□□□□□ -1.85
VPS27YNR006W PNG1Q02890 363 aa3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms