RNA–Protein interactions for RNA: YNL248C

RPA49, Transcript of RNA polymerase I subunit A49, yeast

Gene RPA49, Length 1,248 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPA49	YNL248C	YPT7	P32939	208 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	YKL151C	P36059	337 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	ASC1	P38011	319 aa	Known RBP	4.91	□□□□□ -1.62
RPA49	YNL248C	GPX2	P38143	162 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	YHR035W	P38769	630 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	AXL2	P38928	823 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	BUR6	P40096	142 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	PRE6	P40303	254 aa	Known RBP	4.91	□□□□□ -1.62
RPA49	YNL248C	YJL068C	P40363	299 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	MNT3	P40549	630 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	OYE3	P41816	400 aa	Predicted RBP	4.91	□□□□□ -1.62
RPA49	YNL248C	PRM10	P42946	383 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	HOC1	P47124	396 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	STE24	P47154	453 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	HMS2	P47175	358 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	YGR079W	P53249	370 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	SNO2	P53823	222 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	YSA1	Q01976	231 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	ROT1	Q03691	256 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	GRX3	Q03835	250 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	ROY1	Q04847	553 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	BOP2	Q06150	570 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	ARO10	Q06408	635 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	VPS36	Q06696	566 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	RRP40	Q08285	240 aa	Known RBP	4.91	□□□□□ -1.62
RPA49	YNL248C	SGO1	Q08490	590 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	RCN2	Q12044	265 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	YBL113C	Q7M4S9	792 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	MPD2	Q99316	277 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	INH1	P01097	85 aa		4.9	□□□□□ -1.63
RPA49	YNL248C	RPL6B	P05739	176 aa	Known RBP	4.9	□□□□□ -1.63
RPA49	YNL248C	RPS14A	P06367	137 aa	Known RBP	4.9	□□□□□ -1.63
RPA49	YNL248C	MET2	P08465	486 aa		4.9	□□□□□ -1.63
RPA49	YNL248C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
RPA49	YNL248C	ADE1	P27616	306 aa		4.9	□□□□□ -1.63
RPA49	YNL248C	YIM1	P28625	365 aa		4.9	□□□□□ -1.63
RPA49	YNL248C	NTH1	P32356	751 aa		4.9	□□□□□ -1.63
RPA49	YNL248C	HIR2	P32480	875 aa		4.9	□□□□□ -1.63
RPA49	YNL248C	SFC1	P33303	322 aa		4.9	□□□□□ -1.63
RPA49	YNL248C	DHR2	P36009	735 aa	Predicted RBP	4.9	□□□□□ -1.63
RPA49	YNL248C	TUL1	P36096	758 aa		4.9	□□□□□ -1.63
RPA49	YNL248C	BNA4	P38169	460 aa		4.9	□□□□□ -1.63
RPA49	YNL248C	RPS20	P38701	121 aa	Known RBP	4.9	□□□□□ -1.63
RPA49	YNL248C	RPS14B	P39516	138 aa	Known RBP	4.9	□□□□□ -1.63
RPA49	YNL248C	MIT1	P40002	666 aa		4.9	□□□□□ -1.63
RPA49	YNL248C	ZRG8	P40021	1076 aa		4.9	□□□□□ -1.63
RPA49	YNL248C	FCY21	P40039	528 aa		4.9	□□□□□ -1.63
RPA49	YNL248C	SER2	P42941	309 aa		4.9	□□□□□ -1.63
RPA49	YNL248C	BIT61	P47041	543 aa		4.9	□□□□□ -1.63
RPA49	YNL248C	HXT16	P47185	567 aa		4.9	□□□□□ -1.63
RPA49	YNL248C	MSE1	P48525	536 aa		4.9	□□□□□ -1.63
RPA49	YNL248C	RAD17	P48581	401 aa		4.9	□□□□□ -1.63
RPA49	YNL248C	CPR8	P53728	308 aa		4.9	□□□□□ -1.63
RPA49	YNL248C	CSL4	P53859	292 aa	Predicted RBP	4.9	□□□□□ -1.63
RPA49	YNL248C	CTK1	Q03957	528 aa	Known RBP	4.9	□□□□□ -1.63
RPA49	YNL248C	EAF1	Q06337	982 aa		4.9	□□□□□ -1.63
RPA49	YNL248C	PEX27	Q08580	376 aa		4.9	□□□□□ -1.63
RPA49	YNL248C	SAM4	Q08985	325 aa	Known RBP	4.9	□□□□□ -1.63
RPA49	YNL248C	ACF2	Q12168	779 aa		4.9	□□□□□ -1.63
RPA49	YNL248C	SIA1	Q12212	622 aa		4.9	□□□□□ -1.63
RPA49	YNL248C	PNO1	Q99216	274 aa	Known RBP	4.9	□□□□□ -1.63
RPA49	YNL248C	HRP1	Q99383	534 aa	Known RBP	4.9	□□□□□ -1.63
RPA49	YNL248C	COX3	P00420	269 aa		4.89	□□□□□ -1.63
RPA49	YNL248C	ADE5,7	P07244	802 aa	Known RBP	4.89	□□□□□ -1.63
RPA49	YNL248C	SNF6	P18888	332 aa		4.89	□□□□□ -1.63
RPA49	YNL248C	BET2	P20133	325 aa		4.89	□□□□□ -1.63
RPA49	YNL248C	VPS33	P20795	691 aa		4.89	□□□□□ -1.63
RPA49	YNL248C	NDC1	P32500	655 aa		4.89	□□□□□ -1.63
RPA49	YNL248C	TCD2	P36101	447 aa	Known RBP	4.89	□□□□□ -1.63
RPA49	YNL248C	YHR112C	P38716	378 aa		4.89	□□□□□ -1.63
RPA49	YNL248C	IPI1	P38803	334 aa	Predicted RBP	4.89	□□□□□ -1.63
RPA49	YNL248C	NVJ1	P38881	321 aa		4.89	□□□□□ -1.63
RPA49	YNL248C	TAT2	P38967	592 aa		4.89	□□□□□ -1.63
RPA49	YNL248C	RCY1	P39531	840 aa		4.89	□□□□□ -1.63
RPA49	YNL248C	SIT1	P39980	628 aa		4.89	□□□□□ -1.63
RPA49	YNL248C	SNM1	P40993	198 aa		4.89	□□□□□ -1.63
RPA49	YNL248C	LSG1	P53145	640 aa	Known RBP	4.89	□□□□□ -1.63
RPA49	YNL248C	BUD17	P53727	317 aa		4.89	□□□□□ -1.63
RPA49	YNL248C	COS1	P53822	381 aa		4.89	□□□□□ -1.63
RPA49	YNL248C	MTQ1	P53944	314 aa		4.89	□□□□□ -1.63
RPA49	YNL248C	EAR1	Q03212	550 aa		4.89	□□□□□ -1.63
RPA49	YNL248C	ABZ2	Q03266	374 aa		4.89	□□□□□ -1.63
RPA49	YNL248C	YMR087W	Q04299	284 aa		4.89	□□□□□ -1.63
RPA49	YNL248C	RNH1	Q04740	348 aa		4.89	□□□□□ -1.63
RPA49	YNL248C	RNH202	Q05635	350 aa		4.89	□□□□□ -1.63
RPA49	YNL248C	VID22	Q05934	901 aa		4.89	□□□□□ -1.63
RPA49	YNL248C	YLR446W	Q06204	433 aa		4.89	□□□□□ -1.63
RPA49	YNL248C	GIC2	Q06648	383 aa		4.89	□□□□□ -1.63
RPA49	YNL248C	UIP4	Q08926	304 aa		4.89	□□□□□ -1.63
RPA49	YNL248C	RKM1	Q08961	583 aa	Predicted RBP	4.89	□□□□□ -1.63
RPA49	YNL248C	YPL066W	Q12194	479 aa		4.89	□□□□□ -1.63
RPA49	YNL248C	YLR111W	Q12528	110 aa		4.89	□□□□□ -1.63
RPA49	YNL248C	PDE2	P06776	526 aa		4.88	□□□□□ -1.63
RPA49	YNL248C	CAP2	P13517	287 aa		4.88	□□□□□ -1.63
RPA49	YNL248C	YCK1	P23291	538 aa		4.88	□□□□□ -1.63
RPA49	YNL248C	AGP1	P25376	633 aa		4.88	□□□□□ -1.63
RPA49	YNL248C	PTC6	P25646	442 aa		4.88	□□□□□ -1.63
RPA49	YNL248C	ERG1	P32476	496 aa	Known RBP	4.88	□□□□□ -1.63
RPA49	YNL248C	ARC19	P33204	171 aa	Known RBP	4.88	□□□□□ -1.63
RPA49	YNL248C	YRO2	P38079	344 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 39.7 ms