RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W YGK3Q12222 375 aaPredicted RBP5.52□□□□□ -1.53
ATG4YNL223W HER1Q12276 1246 aa5.52□□□□□ -1.53
ATG4YNL223W RPS21BQ3E754 87 aaKnown RBP5.52□□□□□ -1.53
ATG4YNL223W YOL163WP0CF20 169 aa5.51□□□□□ -1.53
ATG4YNL223W ENA1P13587 1091 aa5.51□□□□□ -1.53
ATG4YNL223W SAM35P14693 329 aa5.51□□□□□ -1.53
ATG4YNL223W BUD5P25300 642 aaPredicted RBP5.51□□□□□ -1.53
ATG4YNL223W IMG1P25626 169 aa5.51□□□□□ -1.53
ATG4YNL223W ASF2P32448 525 aaPredicted RBP5.51□□□□□ -1.53
ATG4YNL223W HBS1P32769 611 aaKnown RBP5.51□□□□□ -1.53
ATG4YNL223W YBR238CP38330 731 aaKnown RBP5.51□□□□□ -1.53
ATG4YNL223W TRR2P38816 342 aa5.51□□□□□ -1.53
ATG4YNL223W GID8P40208 455 aa5.51□□□□□ -1.53
ATG4YNL223W CFD1P40558 293 aa5.51□□□□□ -1.53
ATG4YNL223W GCN20P43535 752 aaKnown RBP5.51□□□□□ -1.53
ATG4YNL223W ALR2P43553 858 aa5.51□□□□□ -1.53
ATG4YNL223W RBL2P48606 106 aaKnown RBP5.51□□□□□ -1.53
ATG4YNL223W MAL11P53048 616 aa5.51□□□□□ -1.53
ATG4YNL223W ERG13P54839 491 aaKnown RBP5.51□□□□□ -1.53
ATG4YNL223W ENA2Q01896 1091 aa5.51□□□□□ -1.53
ATG4YNL223W YSA1Q01976 231 aa5.51□□□□□ -1.53
ATG4YNL223W FMP45Q07651 309 aa5.51□□□□□ -1.53
ATG4YNL223W ENA5Q12691 1091 aa5.51□□□□□ -1.53
ATG4YNL223W MCK1P21965 375 aaKnown RBP5.51□□□□□ -1.53
ATG4YNL223W APN1P22936 367 aa5.51□□□□□ -1.53
ATG4YNL223W ZUO1P32527 433 aaKnown RBP5.51□□□□□ -1.53
ATG4YNL223W UTP11P34247 250 aaPredicted RBP5.51□□□□□ -1.53
ATG4YNL223W SRO77P38163 1010 aa5.51□□□□□ -1.53
ATG4YNL223W SBE22P38814 852 aa5.51□□□□□ -1.53
ATG4YNL223W MBP1P39678 833 aa5.51□□□□□ -1.53
ATG4YNL223W YEL068CP39977 110 aa5.51□□□□□ -1.53
ATG4YNL223W FMP52P40008 231 aa5.51□□□□□ -1.53
ATG4YNL223W RET2P43621 546 aa5.51□□□□□ -1.53
ATG4YNL223W CHA4P43634 648 aa5.51□□□□□ -1.53
ATG4YNL223W TIM54P47045 478 aa5.51□□□□□ -1.53
ATG4YNL223W TOS2P50078 622 aa5.51□□□□□ -1.53
ATG4YNL223W EXG2P52911 562 aa5.51□□□□□ -1.53
ATG4YNL223W YGR012WP53206 393 aa5.51□□□□□ -1.53
ATG4YNL223W YPL068CQ02749 293 aa5.51□□□□□ -1.53
ATG4YNL223W YDR541CQ03049 344 aa5.51□□□□□ -1.53
ATG4YNL223W SRL4Q03085 281 aa5.51□□□□□ -1.53
ATG4YNL223W ABZ2Q03266 374 aa5.51□□□□□ -1.53
ATG4YNL223W SMA2Q04658 369 aa5.51□□□□□ -1.53
ATG4YNL223W RNH1Q04740 348 aa5.51□□□□□ -1.53
ATG4YNL223W DIC1Q06143 298 aa5.51□□□□□ -1.53
ATG4YNL223W MCM21Q06675 368 aa5.51□□□□□ -1.53
ATG4YNL223W YPR091CQ06833 770 aa5.51□□□□□ -1.53
ATG4YNL223W GSH2Q08220 491 aa5.51□□□□□ -1.53
ATG4YNL223W SIA1Q12212 622 aa5.51□□□□□ -1.53
ATG4YNL223W MMP1Q12372 583 aa5.51□□□□□ -1.53
ATG4YNL223W CAR2P07991 424 aaKnown RBP5.5□□□□□ -1.53
ATG4YNL223W YCR006CP25350 157 aa5.5□□□□□ -1.53
ATG4YNL223W MXR2P25566 168 aa5.5□□□□□ -1.53
ATG4YNL223W ITR2P30606 609 aa5.5□□□□□ -1.53
ATG4YNL223W OAC1P32332 324 aa5.5□□□□□ -1.53
ATG4YNL223W PET112P33893 541 aa5.5□□□□□ -1.53
ATG4YNL223W RPS27AP35997 82 aaKnown RBP5.5□□□□□ -1.53
ATG4YNL223W YOR062CP36025 268 aa5.5□□□□□ -1.53
ATG4YNL223W BAP2P38084 609 aa5.5□□□□□ -1.53
ATG4YNL223W FES1P38260 290 aa5.5□□□□□ -1.53
ATG4YNL223W RPS27BP38711 82 aa5.5□□□□□ -1.53
ATG4YNL223W ARN2P38724 620 aa5.5□□□□□ -1.53
ATG4YNL223W YHR097CP38809 366 aaKnown RBP5.5□□□□□ -1.53
ATG4YNL223W ALP1P38971 573 aa5.5□□□□□ -1.53
ATG4YNL223W YIL152WP40455 235 aa5.5□□□□□ -1.53
ATG4YNL223W YIL086CP40503 102 aa5.5□□□□□ -1.53
ATG4YNL223W ALK1P43633 760 aaKnown RBP5.5□□□□□ -1.53
ATG4YNL223W JHD2P47156 728 aaPredicted RBP5.5□□□□□ -1.53
ATG4YNL223W EFM3P47163 339 aa5.5□□□□□ -1.53
ATG4YNL223W SHE4P51534 789 aa5.5□□□□□ -1.53
ATG4YNL223W YGR054WP53235 642 aaKnown RBP5.5□□□□□ -1.53
ATG4YNL223W TPC1P53257 314 aa5.5□□□□□ -1.53
ATG4YNL223W RNH70P53331 553 aa5.5□□□□□ -1.53
ATG4YNL223W YLR446WQ06204 433 aa5.5□□□□□ -1.53
ATG4YNL223W YPR172WQ06608 200 aa5.5□□□□□ -1.53
ATG4YNL223W BSC6Q08280 497 aa5.5□□□□□ -1.53
ATG4YNL223W SKI7Q08491 747 aaPredicted RBP5.5□□□□□ -1.53
ATG4YNL223W YDL211CQ12121 372 aa5.5□□□□□ -1.53
ATG4YNL223W PNS1Q12412 539 aa5.5□□□□□ -1.53
ATG4YNL223W SKM1Q12469 655 aa5.5□□□□□ -1.53
ATG4YNL223W IDP1P21954 428 aaKnown RBP5.49□□□□□ -1.53
ATG4YNL223W CLB2P24869 491 aa5.49□□□□□ -1.53
ATG4YNL223W CMK1P27466 446 aaKnown RBP5.49□□□□□ -1.53
ATG4YNL223W HIR2P32480 875 aa5.49□□□□□ -1.53
ATG4YNL223W LYP1P32487 611 aa5.49□□□□□ -1.53
ATG4YNL223W TOD6P34219 525 aa5.49□□□□□ -1.53
ATG4YNL223W DHR2P36009 735 aaPredicted RBP5.49□□□□□ -1.53
ATG4YNL223W YPK3P38070 525 aa5.49□□□□□ -1.53
ATG4YNL223W YBR139WP38109 508 aa5.49□□□□□ -1.53
ATG4YNL223W SEA4P38164 1038 aa5.49□□□□□ -1.53
ATG4YNL223W ECM34P38728 170 aa5.49□□□□□ -1.53
ATG4YNL223W ANS1P38832 159 aa5.49□□□□□ -1.53
ATG4YNL223W YHR219WP38900 624 aa5.49□□□□□ -1.53
ATG4YNL223W PZF1P39933 429 aa5.49□□□□□ -1.53
ATG4YNL223W YNL195CP40168 261 aa5.49□□□□□ -1.53
ATG4YNL223W QRI7P43122 407 aa5.49□□□□□ -1.53
ATG4YNL223W BAT2P47176 376 aaKnown RBP5.49□□□□□ -1.53
ATG4YNL223W NQM1P53228 333 aaPredicted RBP5.49□□□□□ -1.53
ATG4YNL223W NUP49Q02199 472 aa5.49□□□□□ -1.53
ATG4YNL223W GAL83Q04739 417 aa5.49□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms