RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C FAR8Q05040 523 aa2.9□□□□□ -1.95
SSN8YNL025C CDD1Q06549 142 aa2.9□□□□□ -1.95
SSN8YNL025C BER1Q06688 274 aaKnown RBP2.9□□□□□ -1.95
SSN8YNL025C YET3Q07451 203 aa2.9□□□□□ -1.95
SSN8YNL025C YDL242WQ07746 117 aa2.9□□□□□ -1.95
SSN8YNL025C PER33Q12144 273 aa2.9□□□□□ -1.95
SSN8YNL025C RKI1Q12189 258 aa2.9□□□□□ -1.95
SSN8YNL025C SPO24Q3E752 67 aa2.9□□□□□ -1.95
SSN8YNL025C SPA2P23201 1466 aaKnown RBP2.9□□□□□ -1.95
SSN8YNL025C HIS1P00498 297 aaKnown RBP2.89□□□□□ -1.95
SSN8YNL025C CDC33P07260 213 aaKnown RBP2.89□□□□□ -1.95
SSN8YNL025C YPK1P12688 680 aaKnown RBP2.89□□□□□ -1.95
SSN8YNL025C REV1P12689 985 aa2.89□□□□□ -1.95
SSN8YNL025C CLN3P13365 580 aa2.89□□□□□ -1.95
SSN8YNL025C FRS2P15625 503 aaKnown RBP2.89□□□□□ -1.95
SSN8YNL025C IDH1P28834 360 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
SSN8YNL025C ACB1P31787 87 aa2.89□□□□□ -1.95
SSN8YNL025C PRP21P32524 280 aaPredicted RBP2.89□□□□□ -1.95
SSN8YNL025C MSS1P32559 526 aaPredicted RBP2.89□□□□□ -1.95
SSN8YNL025C RPC34P32910 317 aa2.89□□□□□ -1.95
SSN8YNL025C NUF2P33895 451 aa2.89□□□□□ -1.95
SSN8YNL025C FIG1P38224 298 aa2.89□□□□□ -1.95
SSN8YNL025C AME1P38313 324 aa2.89□□□□□ -1.95
SSN8YNL025C HAT2P39984 401 aa2.89□□□□□ -1.95
SSN8YNL025C YER079WP40052 210 aaKnown RBP2.89□□□□□ -1.95
SSN8YNL025C LCP5P40079 357 aaPredicted RBP2.89□□□□□ -1.95
SSN8YNL025C COX15P40086 486 aa2.89□□□□□ -1.95
SSN8YNL025C BTT1P40314 149 aaPredicted RBP2.89□□□□□ -1.95
SSN8YNL025C ERG10P41338 398 aaKnown RBP2.89□□□□□ -1.95
SSN8YNL025C TFG2P41896 400 aaPredicted RBP2.89□□□□□ -1.95
SSN8YNL025C PMT6P42934 759 aa2.89□□□□□ -1.95
SSN8YNL025C YPT11P48559 417 aa2.89□□□□□ -1.95
SSN8YNL025C YGL159WP53110 370 aa2.89□□□□□ -1.95
SSN8YNL025C NMA2P53204 395 aa2.89□□□□□ -1.95
SSN8YNL025C YGR168CP53293 376 aa2.89□□□□□ -1.95
SSN8YNL025C RRN9P53437 365 aa2.89□□□□□ -1.95
SSN8YNL025C SLG1P54867 378 aa2.89□□□□□ -1.95
SSN8YNL025C CTF19Q02732 369 aa2.89□□□□□ -1.95
SSN8YNL025C GIP3Q03016 1276 aa2.89□□□□□ -1.95
SSN8YNL025C MMT1Q03218 510 aa2.89□□□□□ -1.95
SSN8YNL025C RVB1Q03940 463 aaKnown RBP2.89□□□□□ -1.95
SSN8YNL025C COQ9Q05779 260 aa2.89□□□□□ -1.95
SSN8YNL025C IZH3Q07959 543 aa2.89□□□□□ -1.95
SSN8YNL025C ERP3Q12403 225 aa2.89□□□□□ -1.95
SSN8YNL025C ZPS1Q12512 249 aa2.89□□□□□ -1.95
SSN8YNL025C SKI3P17883 1432 aaKnown RBP2.88□□□□□ -1.95
SSN8YNL025C COX3P00420 269 aa2.88□□□□□ -1.95
SSN8YNL025C YPT1P01123 206 aaKnown RBP2.88□□□□□ -1.95
SSN8YNL025C PAB1P04147 577 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
SSN8YNL025C CHO2P05374 869 aaKnown RBP2.88□□□□□ -1.95
SSN8YNL025C RHO1P06780 209 aaKnown RBP2.88□□□□□ -1.95
SSN8YNL025C HEM1P09950 548 aaPredicted RBP2.88□□□□□ -1.95
SSN8YNL025C RPL35AP0CX84 120 aaKnown RBP2.88□□□□□ -1.95
SSN8YNL025C RPL35BP0CX85 120 aaKnown RBP2.88□□□□□ -1.95
SSN8YNL025C ARF1P11076 181 aaKnown RBP2.88□□□□□ -1.95
SSN8YNL025C PCT1P13259 424 aa2.88□□□□□ -1.95
SSN8YNL025C ATP10P18496 279 aa2.88□□□□□ -1.95
SSN8YNL025C FAR1P21268 830 aa2.88□□□□□ -1.95
SSN8YNL025C SLM5P25345 492 aaKnown RBP2.88□□□□□ -1.95
SSN8YNL025C PTC6P25646 442 aa2.88□□□□□ -1.95
SSN8YNL025C ADE1P27616 306 aa2.88□□□□□ -1.95
SSN8YNL025C NUP2P32499 720 aa2.88□□□□□ -1.95
SSN8YNL025C PDR3P33200 976 aa2.88□□□□□ -1.95
SSN8YNL025C CBT1P36038 271 aaPredicted RBP2.88□□□□□ -1.95
SSN8YNL025C VBA2P38358 474 aaKnown RBP2.88□□□□□ -1.95
SSN8YNL025C NPT1P39683 429 aaKnown RBP2.88□□□□□ -1.95
SSN8YNL025C VAB2P40003 282 aa2.88□□□□□ -1.95
SSN8YNL025C LYS12P40495 371 aaKnown RBP2.88□□□□□ -1.95
SSN8YNL025C AGE2P40529 298 aa2.88□□□□□ -1.95
SSN8YNL025C YPS6P40583 537 aa2.88□□□□□ -1.95
SSN8YNL025C POP1P41812 875 aa2.88□□□□□ -1.95
SSN8YNL025C RTT101P47050 842 aa2.88□□□□□ -1.95
SSN8YNL025C RPC17P47076 161 aa2.88□□□□□ -1.95
SSN8YNL025C YGL117WP53133 265 aa2.88□□□□□ -1.95
SSN8YNL025C CPR8P53728 308 aa2.88□□□□□ -1.95
SSN8YNL025C TRM112P53738 135 aaPredicted RBP2.88□□□□□ -1.95
SSN8YNL025C UBP16Q02863 499 aa2.88□□□□□ -1.95
SSN8YNL025C YMR087WQ04299 284 aa2.88□□□□□ -1.95
SSN8YNL025C HSP31Q04432 237 aa2.88□□□□□ -1.95
SSN8YNL025C DCR2Q05924 578 aa2.88□□□□□ -1.95
SSN8YNL025C THP1Q08231 455 aa2.88□□□□□ -1.95
SSN8YNL025C YDL109CQ12103 647 aa2.88□□□□□ -1.95
SSN8YNL025C MSH5Q12175 901 aa2.88□□□□□ -1.95
SSN8YNL025C TIP41Q12199 356 aa2.88□□□□□ -1.95
SSN8YNL025C HTB1P02293 131 aaKnown RBP2.87□□□□□ -1.95
SSN8YNL025C HTB2P02294 131 aa2.87□□□□□ -1.95
SSN8YNL025C DST1P07273 309 aa2.87□□□□□ -1.95
SSN8YNL025C CHS1P08004 1131 aa2.87□□□□□ -1.95
SSN8YNL025C MRP2P10663 115 aaPredicted RBP2.87□□□□□ -1.95
SSN8YNL025C SNA3P14359 133 aa2.87□□□□□ -1.95
SSN8YNL025C YAP1P19880 650 aaKnown RBP2.87□□□□□ -1.95
SSN8YNL025C CKI1P20485 582 aa2.87□□□□□ -1.95
SSN8YNL025C NUP1P20676 1076 aa2.87□□□□□ -1.95
SSN8YNL025C RAD57P25301 460 aa2.87□□□□□ -1.95
SSN8YNL025C CTR86P25355 563 aa2.87□□□□□ -1.95
SSN8YNL025C ELO2P25358 347 aa2.87□□□□□ -1.95
SSN8YNL025C ITR2P30606 609 aa2.87□□□□□ -1.95
SSN8YNL025C VPH2P32341 215 aa2.87□□□□□ -1.95
SSN8YNL025C NDC1P32500 655 aa2.87□□□□□ -1.95
SSN8YNL025C SPS19P32573 292 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms