RNA–Protein interactions for RNA: YML118W

NGL3, Transcript of 3'-5' exonuclease specific for poly-A RNAs, yeast

Gene NGL3, Length 1,518 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NGL3	YML118W	DEG1	P31115	442 aa	Known RBP	4	□□□□□ -1.77
NGL3	YML118W	VAM7	P32912	316 aa		4	□□□□□ -1.77
NGL3	YML118W	YKT6	P36015	200 aa	Known RBP	4	□□□□□ -1.77
NGL3	YML118W	SCO2	P38072	301 aa		4	□□□□□ -1.77
NGL3	YML118W	SIM1	P40472	476 aa		4	□□□□□ -1.77
NGL3	YML118W	CFD1	P40558	293 aa		4	□□□□□ -1.77
NGL3	YML118W	NAT4	Q04751	285 aa		4	□□□□□ -1.77
NGL3	YML118W	OSW1	Q08692	278 aa		4	□□□□□ -1.77
NGL3	YML118W	NCA2	Q12374	616 aa		4	□□□□□ -1.77
NGL3	YML118W	PDR5	P33302	1511 aa	Known RBP	3.99	□□□□□ -1.77
NGL3	YML118W	MBR1	P23493	339 aa		3.99	□□□□□ -1.77
NGL3	YML118W	GPI12	P23797	304 aa		3.99	□□□□□ -1.77
NGL3	YML118W	CSM1	P25651	190 aa		3.99	□□□□□ -1.77
NGL3	YML118W	TIP1	P27654	210 aa	Predicted RBP	3.99	□□□□□ -1.77
NGL3	YML118W	MRPS5	P33759	307 aa		3.99	□□□□□ -1.77
NGL3	YML118W	MYO3	P36006	1272 aa		3.99	□□□□□ -1.77
NGL3	YML118W	IML3	P38265	245 aa		3.99	□□□□□ -1.77
NGL3	YML118W	PEX32	P38292	413 aa		3.99	□□□□□ -1.77
NGL3	YML118W	TAE1	P38340	232 aa		3.99	□□□□□ -1.77
NGL3	YML118W	FLO5	P38894	1075 aa		3.99	□□□□□ -1.77
NGL3	YML118W	SHO1	P40073	367 aa		3.99	□□□□□ -1.77
NGL3	YML118W	SEC9	P40357	651 aa		3.99	□□□□□ -1.77
NGL3	YML118W	YIL024C	P40543	189 aa		3.99	□□□□□ -1.77
NGL3	YML118W	GUF1	P46943	645 aa		3.99	□□□□□ -1.77
NGL3	YML118W	GWT1	P47026	490 aa		3.99	□□□□□ -1.77
NGL3	YML118W	YGR117C	P53270	476 aa		3.99	□□□□□ -1.77
NGL3	YML118W	RRN9	P53437	365 aa		3.99	□□□□□ -1.77
NGL3	YML118W	ESBP6	P53918	673 aa		3.99	□□□□□ -1.77
NGL3	YML118W	SPR6	Q01684	191 aa		3.99	□□□□□ -1.77
NGL3	YML118W	SHS1	Q07657	551 aa		3.99	□□□□□ -1.77
NGL3	YML118W	TIM18	Q08749	192 aa		3.99	□□□□□ -1.77
NGL3	YML118W	YOP1	Q12402	180 aa		3.99	□□□□□ -1.77
NGL3	YML118W	RRP12	Q12754	1228 aa	Known RBP	3.99	□□□□□ -1.77
NGL3	YML118W	RPB4	P20433	221 aa	Predicted RBP	3.98	□□□□□ -1.77
NGL3	YML118W	MRPL8	P22353	238 aa		3.98	□□□□□ -1.77
NGL3	YML118W	RPL5	P26321	297 aa	Known RBP	3.98	□□□□□ -1.77
NGL3	YML118W	ITR1	P30605	584 aa		3.98	□□□□□ -1.77
NGL3	YML118W	VMA5	P31412	392 aa	Known RBP	3.98	□□□□□ -1.77
NGL3	YML118W	DPH5	P32469	300 aa	Predicted RBP	3.98	□□□□□ -1.77
NGL3	YML118W	DOA4	P32571	926 aa		3.98	□□□□□ -1.77
NGL3	YML118W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.98	□□□□□ -1.77	not detected
NGL3	YML118W	LOS1	P33418	1100 aa	Predicted RBP	3.98	□□□□□ -1.77
NGL3	YML118W	MSN4	P33749	630 aa		3.98	□□□□□ -1.77
NGL3	YML118W	FAA2	P39518	744 aa		3.98	□□□□□ -1.77
NGL3	YML118W	DSE1	P40077	573 aa		3.98	□□□□□ -1.77
NGL3	YML118W	QRI1	P43123	477 aa	Known RBP	3.98	□□□□□ -1.77
NGL3	YML118W	FMP33	P46998	180 aa		3.98	□□□□□ -1.77
NGL3	YML118W	PET117	Q02771	107 aa		3.98	□□□□□ -1.77
NGL3	YML118W	RVB1	Q03940	463 aa	Known RBP	3.98	□□□□□ -1.77
NGL3	YML118W	GPN3	Q06543	272 aa		3.98	□□□□□ -1.77
NGL3	YML118W	ESC1	Q03661	1658 aa	Known RBP	3.98	□□□□□ -1.77
NGL3	YML118W	TY3B-G	Q99315	1547 aa		3.98	□□□□□ -1.77
NGL3	YML118W	RAD9	P14737	1309 aa		3.97	□□□□□ -1.77
NGL3	YML118W	YAP1	P19880	650 aa	Known RBP	3.97	□□□□□ -1.77
NGL3	YML118W	UTR1	P21373	530 aa		3.97	□□□□□ -1.77
NGL3	YML118W	DAL2	P25335	343 aa		3.97	□□□□□ -1.77
NGL3	YML118W	ERG1	P32476	496 aa	Known RBP	3.97	□□□□□ -1.77
NGL3	YML118W	PPZ2	P33329	710 aa		3.97	□□□□□ -1.77
NGL3	YML118W	YKL162C	P36052	402 aa		3.97	□□□□□ -1.77
NGL3	YML118W	RRP3	P38712	501 aa	Known RBP	3.97	□□□□□ -1.77
NGL3	YML118W	YHR045W	P38775	560 aa		3.97	□□□□□ -1.77
NGL3	YML118W	DHH1	P39517	506 aa	Known RBP	3.97	□□□□□ -1.77
NGL3	YML118W	NAS6	P50086	228 aa		3.97	□□□□□ -1.77
NGL3	YML118W	BIO3	P50277	480 aa		3.97	□□□□□ -1.77
NGL3	YML118W	MNT4	P53745	580 aa		3.97	□□□□□ -1.77
NGL3	YML118W	ARK1	P53974	638 aa		3.97	□□□□□ -1.77
NGL3	YML118W	INP2	Q03824	705 aa		3.97	□□□□□ -1.77
NGL3	YML118W	YEH2	Q07950	538 aa		3.97	□□□□□ -1.77
NGL3	YML118W	YAP7	Q08182	245 aa		3.97	□□□□□ -1.77
NGL3	YML118W	MUM3	Q08750	479 aa		3.97	□□□□□ -1.77
NGL3	YML118W	TPT1	Q12272	230 aa	Known RBP	3.97	□□□□□ -1.77
NGL3	YML118W	CRC1	Q12289	327 aa		3.97	□□□□□ -1.77
NGL3	YML118W	ADF1	Q2V2Q1	113 aa		3.97	□□□□□ -1.77
NGL3	YML118W	RPL42A	P0CX27	106 aa	Known RBP	3.96	□□□□□ -1.78
NGL3	YML118W	RPL42B	P0CX28	106 aa	Known RBP	3.96	□□□□□ -1.78
NGL3	YML118W	CDC23	P16522	626 aa		3.96	□□□□□ -1.78
NGL3	YML118W	ARF2	P19146	181 aa	Known RBP	3.96	□□□□□ -1.78
NGL3	YML118W	ILV6	P25605	309 aa	Known RBP	3.96	□□□□□ -1.78
NGL3	YML118W	GLC7	P32598	312 aa	Known RBP	3.96	□□□□□ -1.78
NGL3	YML118W	SIP2	P34164	415 aa	Known RBP	3.96	□□□□□ -1.78
NGL3	YML118W	MCR1	P36060	302 aa	Known RBP	3.96	□□□□□ -1.78
NGL3	YML118W	CCT4	P39078	528 aa	Known RBP	3.96	□□□□□ -1.78
NGL3	YML118W	INA22	P40576	216 aa		3.96	□□□□□ -1.78
NGL3	YML118W	SSN8	P47821	323 aa		3.96	□□□□□ -1.78
NGL3	YML118W	ERG13	P54839	491 aa	Known RBP	3.96	□□□□□ -1.78
NGL3	YML118W	BET4	Q00618	327 aa		3.96	□□□□□ -1.78
NGL3	YML118W	ATX2	Q12067	313 aa		3.96	□□□□□ -1.78
NGL3	YML118W	PNS1	Q12412	539 aa		3.96	□□□□□ -1.78
NGL3	YML118W	PRP46	Q12417	451 aa	Predicted RBP	3.96	□□□□□ -1.78
NGL3	YML118W	ULS1	Q08562	1619 aa		3.96	□□□□□ -1.78
NGL3	YML118W	POM152	P39685	1337 aa		3.96	□□□□□ -1.78
NGL3	YML118W	GDB1	Q06625	1536 aa		3.96	□□□□□ -1.78
NGL3	YML118W	RAD1	P06777	1100 aa		3.95	□□□□□ -1.78
NGL3	YML118W	RAD7	P06779	565 aa		3.95	□□□□□ -1.78
NGL3	YML118W	FAR1	P21268	830 aa		3.95	□□□□□ -1.78
NGL3	YML118W	VPS3	P23643	1011 aa		3.95	□□□□□ -1.78
NGL3	YML118W	SUA5	P32579	426 aa		3.95	□□□□□ -1.78
NGL3	YML118W	IMP3	P32899	183 aa	Predicted RBP	3.95	□□□□□ -1.78
NGL3	YML118W	SBE22	P38814	852 aa		3.95	□□□□□ -1.78
NGL3	YML118W	ATG7	P38862	630 aa		3.95	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms