RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C EFM3P47163 339 aa1.78□□□□□ -2.12
SGD1YLR336C MPS2P53159 387 aa1.78□□□□□ -2.12
SGD1YLR336C RET3P53600 189 aa1.78□□□□□ -2.12
SGD1YLR336C PEX27Q08580 376 aa1.78□□□□□ -2.12
SGD1YLR336C AIM45Q12480 344 aaKnown RBP1.78□□□□□ -2.12
SGD1YLR336C RPB5P20434 215 aa1.77□□□□□ -2.13
SGD1YLR336C SAG1P20840 650 aa1.77□□□□□ -2.13
SGD1YLR336C CHA1P25379 360 aaKnown RBP1.77□□□□□ -2.13
SGD1YLR336C RDS1P25611 832 aa1.77□□□□□ -2.13
SGD1YLR336C MSK1P32048 576 aa1.77□□□□□ -2.13
SGD1YLR336C ECM8P38246 354 aa1.77□□□□□ -2.13
SGD1YLR336C GDT1P38301 280 aaPredicted RBP1.77□□□□□ -2.13
SGD1YLR336C MAM33P40513 266 aa1.77□□□□□ -2.13
SGD1YLR336C YFR057WP43625 151 aa1.77□□□□□ -2.13
SGD1YLR336C SDT1P53078 280 aa1.77□□□□□ -2.13
SGD1YLR336C CUE3P53137 624 aaKnown RBP1.77□□□□□ -2.13
SGD1YLR336C TRM112P53738 135 aaPredicted RBP1.77□□□□□ -2.13
SGD1YLR336C JID1Q12350 301 aa1.77□□□□□ -2.13
SGD1YLR336C NUP2P32499 720 aa1.77□□□□□ -2.13
SGD1YLR336C SPR1P32603 445 aa1.77□□□□□ -2.13
SGD1YLR336C SPT10P35208 640 aa1.77□□□□□ -2.13
SGD1YLR336C RTC2P38279 296 aa1.77□□□□□ -2.13
SGD1YLR336C UTP18P40362 594 aaPredicted RBP1.77□□□□□ -2.13
SGD1YLR336C SEC27P41811 889 aaKnown RBP1.77□□□□□ -2.13
SGD1YLR336C AQR1P53943 586 aa1.77□□□□□ -2.13
SGD1YLR336C YLR152CP54072 576 aa1.77□□□□□ -2.13
SGD1YLR336C AIM33Q04516 312 aa1.77□□□□□ -2.13
SGD1YLR336C PAL1Q05518 499 aaKnown RBP1.77□□□□□ -2.13
SGD1YLR336C YHC1Q05900 231 aaKnown RBP1.77□□□□□ -2.13
SGD1YLR336C FUN26P31381 517 aa1.76□□□□□ -2.13
SGD1YLR336C RAD5P32849 1169 aaPredicted RBP1.76□□□□□ -2.13
SGD1YLR336C SPO23P33757 523 aa1.76□□□□□ -2.13
SGD1YLR336C OXA1P39952 402 aa1.76□□□□□ -2.13
SGD1YLR336C HEM14P40012 539 aa1.76□□□□□ -2.13
SGD1YLR336C LCP5P40079 357 aaPredicted RBP1.76□□□□□ -2.13
SGD1YLR336C LYS12P40495 371 aaKnown RBP1.76□□□□□ -2.13
SGD1YLR336C GAB1P41733 394 aa1.76□□□□□ -2.13
SGD1YLR336C KEG1P43614 200 aa1.76□□□□□ -2.13
SGD1YLR336C RPA34P47006 233 aaPredicted RBP1.76□□□□□ -2.13
SGD1YLR336C PRM6Q04705 352 aa1.76□□□□□ -2.13
SGD1YLR336C MCT1Q12283 360 aa1.76□□□□□ -2.13
SGD1YLR336C YDL199CQ12407 687 aa1.76□□□□□ -2.13
SGD1YLR336C DET1Q99288 334 aaKnown RBP1.76□□□□□ -2.13
SGD1YLR336C FSH3Q99369 266 aa1.76□□□□□ -2.13
SGD1YLR336C GRR1P24814 1151 aa1.76□□□□□ -2.13
SGD1YLR336C ZUO1P32527 433 aaKnown RBP1.76□□□□□ -2.13
SGD1YLR336C SMI1P32566 505 aa1.76□□□□□ -2.13
SGD1YLR336C SNL1P40548 159 aa1.76□□□□□ -2.13
SGD1YLR336C CIN2P46670 268 aa1.76□□□□□ -2.13
SGD1YLR336C ATP22P50273 684 aaPredicted RBP1.76□□□□□ -2.13
SGD1YLR336C YLH47Q06493 454 aa1.76□□□□□ -2.13
SGD1YLR336C YDL114WQ07530 308 aa1.76□□□□□ -2.13
SGD1YLR336C VAM7P32912 316 aa1.75□□□□□ -2.13
SGD1YLR336C YBL028CP38202 106 aa1.75□□□□□ -2.13
SGD1YLR336C FYV8P46949 817 aaKnown RBP1.75□□□□□ -2.13
SGD1YLR336C YET2Q04210 160 aa1.75□□□□□ -2.13
SGD1YLR336C CMS1Q07897 291 aaKnown RBP1.75□□□□□ -2.13
SGD1YLR336C NAG1Q8TGN9 163 aa1.75□□□□□ -2.13
SGD1YLR336C MAS2P11914 482 aa1.75□□□□□ -2.13
SGD1YLR336C TAL1P15019 335 aaKnown RBP1.75□□□□□ -2.13
SGD1YLR336C THR4P16120 514 aaKnown RBP1.75□□□□□ -2.13
SGD1YLR336C CKI1P20485 582 aa1.75□□□□□ -2.13
SGD1YLR336C FAR1P21268 830 aa1.75□□□□□ -2.13
SGD1YLR336C AAT2P23542 418 aaKnown RBP1.75□□□□□ -2.13
SGD1YLR336C YEL043WP32618 956 aa1.75□□□□□ -2.13
SGD1YLR336C UIP5P36137 443 aa1.75□□□□□ -2.13
SGD1YLR336C YNL208WP40159 199 aaKnown RBP1.75□□□□□ -2.13
SGD1YLR336C SHY1P53266 389 aa1.75□□□□□ -2.13
SGD1YLR336C PDR16P53860 351 aaKnown RBP1.75□□□□□ -2.13
SGD1YLR336C TSA2Q04120 196 aa1.75□□□□□ -2.13
SGD1YLR336C YMR027WQ04371 470 aa1.75□□□□□ -2.13
SGD1YLR336C SHS1Q07657 551 aa1.75□□□□□ -2.13
SGD1YLR336C PCL9Q12477 304 aa1.75□□□□□ -2.13
SGD1YLR336C MAS1P10507 462 aa1.75□□□□□ -2.13
SGD1YLR336C MRPL8P22353 238 aa1.75□□□□□ -2.13
SGD1YLR336C PCL1P24867 279 aa1.75□□□□□ -2.13
SGD1YLR336C ATG7P38862 630 aa1.75□□□□□ -2.13
SGD1YLR336C PGU1P47180 361 aa1.75□□□□□ -2.13
SGD1YLR336C SHE10P53075 577 aa1.75□□□□□ -2.13
SGD1YLR336C CLD1P53264 445 aa1.75□□□□□ -2.13
SGD1YLR336C SMP3Q04174 516 aa1.75□□□□□ -2.13
SGD1YLR336C LIP2Q06005 328 aa1.75□□□□□ -2.13
SGD1YLR336C MEX67Q99257 599 aaKnown RBP1.75□□□□□ -2.13
SGD1YLR336C YIL089WP40500 205 aa1.74□□□□□ -2.13
SGD1YLR336C HTZ1Q12692 134 aaKnown RBP1.74□□□□□ -2.13
SGD1YLR336C NBL1Q3E7Y6 73 aa1.74□□□□□ -2.13
SGD1YLR336C HXT2P23585 541 aa1.74□□□□□ -2.13
SGD1YLR336C PRR1P28708 518 aa1.74□□□□□ -2.13
SGD1YLR336C SSE1P32589 693 aaKnown RBP1.74□□□□□ -2.13
SGD1YLR336C ANP1P32629 500 aa1.74□□□□□ -2.13
SGD1YLR336C UTH1P36135 365 aa1.74□□□□□ -2.13
SGD1YLR336C YHR122WP38829 231 aa1.74□□□□□ -2.13
SGD1YLR336C PFS1P38872 237 aa1.74□□□□□ -2.13
SGD1YLR336C TIM17P39515 158 aa1.74□□□□□ -2.13
SGD1YLR336C YER186CP40101 306 aa1.74□□□□□ -2.13
SGD1YLR336C SEC9P40357 651 aa1.74□□□□□ -2.13
SGD1YLR336C SHE4P51534 789 aa1.74□□□□□ -2.13
SGD1YLR336C ALF1P53904 254 aa1.74□□□□□ -2.13
SGD1YLR336C REX2P54964 269 aaKnown RBP1.74□□□□□ -2.13
SGD1YLR336C SKI8Q02793 397 aaPredicted RBP1.74□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms