RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W GIT1P25346 518 aa2.82□□□□□ -1.96
SMD2YLR275W ZUO1P32527 433 aaKnown RBP2.82□□□□□ -1.96
SMD2YLR275W TRF5P48561 642 aaKnown RBP2.82□□□□□ -1.96
SMD2YLR275W VHT1P53241 593 aa2.82□□□□□ -1.96
SMD2YLR275W REX2P54964 269 aaKnown RBP2.82□□□□□ -1.96
SMD2YLR275W ENT5Q03769 411 aaKnown RBP2.82□□□□□ -1.96
SMD2YLR275W MEX67Q99257 599 aaKnown RBP2.82□□□□□ -1.96
SMD2YLR275W TOA2P32774 122 aa2.81□□□□□ -1.96
SMD2YLR275W SOL2P37262 315 aa2.81□□□□□ -1.96
SMD2YLR275W BMT2P38278 337 aa2.81□□□□□ -1.96
SMD2YLR275W BUD27P43573 796 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
SMD2YLR275W YML6P51998 286 aa2.81□□□□□ -1.96
SMD2YLR275W YPL107WQ02873 248 aa2.81□□□□□ -1.96
SMD2YLR275W YDR541CQ03049 344 aa2.81□□□□□ -1.96
SMD2YLR275W PIN3Q06449 215 aa2.81□□□□□ -1.96
SMD2YLR275W NDL1Q06568 189 aa2.81□□□□□ -1.96
SMD2YLR275W MCT1Q12283 360 aa2.81□□□□□ -1.96
SMD2YLR275W HMS1Q12398 434 aa2.81□□□□□ -1.96
SMD2YLR275W RAX2Q12465 1220 aa2.81□□□□□ -1.96
SMD2YLR275W RPS18AP0CX55 146 aaKnown RBP2.8□□□□□ -1.96
SMD2YLR275W RPS18BP0CX56 146 aaPredicted RBP2.8□□□□□ -1.96
SMD2YLR275W DTR1P38125 572 aa2.8□□□□□ -1.96
SMD2YLR275W PFF1P38244 976 aa2.8□□□□□ -1.96
SMD2YLR275W KEG1P43614 200 aa2.8□□□□□ -1.96
SMD2YLR275W ABM1P47146 123 aa2.8□□□□□ -1.96
SMD2YLR275W ATP22P50273 684 aaPredicted RBP2.8□□□□□ -1.96
SMD2YLR275W RPL21AQ02753 160 aaKnown RBP2.8□□□□□ -1.96
SMD2YLR275W MSC3Q05812 728 aa2.8□□□□□ -1.96
SMD2YLR275W RPL21BQ12672 160 aaKnown RBP2.8□□□□□ -1.96
SMD2YLR275W WSC4P38739 605 aa2.79□□□□□ -1.96
SMD2YLR275W CHL4P38907 458 aa2.79□□□□□ -1.96
SMD2YLR275W PEX22P39718 180 aa2.79□□□□□ -1.96
SMD2YLR275W YER184CP39961 794 aa2.79□□□□□ -1.96
SMD2YLR275W RSC1P53236 928 aa2.79□□□□□ -1.96
SMD2YLR275W RTT102P53330 157 aa2.79□□□□□ -1.96
SMD2YLR275W PRP38Q00723 242 aaPredicted RBP2.79□□□□□ -1.96
SMD2YLR275W CIK1Q01649 594 aa2.79□□□□□ -1.96
SMD2YLR275W ERO1Q03103 563 aa2.79□□□□□ -1.96
SMD2YLR275W LDS2Q08218 356 aa2.79□□□□□ -1.96
SMD2YLR275W PUT4P15380 627 aa2.78□□□□□ -1.96
SMD2YLR275W CHA1P25379 360 aaKnown RBP2.78□□□□□ -1.96
SMD2YLR275W PEX5P35056 612 aa2.78□□□□□ -1.96
SMD2YLR275W SEC27P41811 889 aaKnown RBP2.78□□□□□ -1.96
SMD2YLR275W MEH1Q02205 184 aa2.78□□□□□ -1.96
SMD2YLR275W YMR010WQ03687 405 aa2.78□□□□□ -1.96
SMD2YLR275W AAD15Q08361 143 aa2.78□□□□□ -1.96
SMD2YLR275W SPE3Q12074 293 aaKnown RBP2.78□□□□□ -1.96
SMD2YLR275W TPI1P00942 248 aaKnown RBP2.77□□□□□ -1.97
SMD2YLR275W RNA1P11745 407 aaKnown RBP2.77□□□□□ -1.97
SMD2YLR275W MAS2P11914 482 aa2.77□□□□□ -1.97
SMD2YLR275W HEM14P40012 539 aa2.77□□□□□ -1.97
SMD2YLR275W CIN2P46670 268 aa2.77□□□□□ -1.97
SMD2YLR275W SEH1P53011 349 aaKnown RBP2.77□□□□□ -1.97
SMD2YLR275W VAC7P53950 1165 aa2.77□□□□□ -1.97
SMD2YLR275W GYL1Q04322 720 aa2.77□□□□□ -1.97
SMD2YLR275W YLR177WQ06251 628 aa2.77□□□□□ -1.97
SMD2YLR275W NOP6Q07623 225 aaKnown RBP2.77□□□□□ -1.97
SMD2YLR275W SFM1Q12314 213 aa2.77□□□□□ -1.97
SMD2YLR275W PRM7Q12459 698 aa2.77□□□□□ -1.97
SMD2YLR275W ASP3-2P0CX77 362 aa2.76□□□□□ -1.97
SMD2YLR275W ASP3-3P0CX78 362 aa2.76□□□□□ -1.97
SMD2YLR275W ASP3-4P0CX79 362 aa2.76□□□□□ -1.97
SMD2YLR275W ASP3-1P0CZ17 362 aa2.76□□□□□ -1.97
SMD2YLR275W WSS1P38838 269 aa2.76□□□□□ -1.97
SMD2YLR275W HST1P53685 503 aa2.76□□□□□ -1.97
SMD2YLR275W SXM1Q04175 944 aaKnown RBP2.76□□□□□ -1.97
SMD2YLR275W YDR115WQ04598 105 aa2.76□□□□□ -1.97
SMD2YLR275W TOA1P32773 286 aa2.75□□□□□ -1.97
SMD2YLR275W PDC2P32896 925 aa2.75□□□□□ -1.97
SMD2YLR275W KAP104P38217 918 aaKnown RBP2.75□□□□□ -1.97
SMD2YLR275W MNL1P38888 796 aa2.75□□□□□ -1.97
SMD2YLR275W VPS9P54787 451 aa2.75□□□□□ -1.97
SMD2YLR275W RPN5Q12250 445 aaKnown RBP2.75□□□□□ -1.97
SMD2YLR275W RPS19AP07280 144 aaKnown RBP2.74□□□□□ -1.97
SMD2YLR275W RPS19BP07281 144 aaPredicted RBP2.74□□□□□ -1.97
SMD2YLR275W RPL1AP0CX43 217 aaKnown RBP2.74□□□□□ -1.97
SMD2YLR275W RPL1BP0CX44 217 aaKnown RBP2.74□□□□□ -1.97
SMD2YLR275W MNE1P24720 663 aa2.74□□□□□ -1.97
SMD2YLR275W RPL16AP26784 199 aaKnown RBP2.74□□□□□ -1.97
SMD2YLR275W LDS1P31379 325 aa2.74□□□□□ -1.97
SMD2YLR275W ANP1P32629 500 aa2.74□□□□□ -1.97
SMD2YLR275W FMT1P32785 401 aa2.74□□□□□ -1.97
SMD2YLR275W LRP1P38801 184 aaKnown RBP2.74□□□□□ -1.97
SMD2YLR275W LCB2P40970 561 aa2.74□□□□□ -1.97
SMD2YLR275W PFS2P42841 465 aaKnown RBP2.74□□□□□ -1.97
SMD2YLR275W YJL055WP47044 245 aa2.74□□□□□ -1.97
SMD2YLR275W ASN2P49090 572 aaKnown RBP2.74□□□□□ -1.97
SMD2YLR275W CWC22P53333 577 aaKnown RBP2.74□□□□□ -1.97
SMD2YLR275W FSH2Q05015 223 aa2.74□□□□□ -1.97
SMD2YLR275W TIR4Q12218 487 aaPredicted RBP2.74□□□□□ -1.97
SMD2YLR275W YPS3Q12303 508 aa2.74□□□□□ -1.97
SMD2YLR275W LDB17Q12342 491 aa2.74□□□□□ -1.97
SMD2YLR275W HIF1Q12373 385 aa2.74□□□□□ -1.97
SMD2YLR275W HEM4P06174 275 aa2.73□□□□□ -1.97
SMD2YLR275W RRP7P25368 297 aaPredicted RBP2.73□□□□□ -1.97
SMD2YLR275W SPP381P38282 291 aaPredicted RBP2.73□□□□□ -1.97
SMD2YLR275W CTK3P46963 296 aaPredicted RBP2.73□□□□□ -1.97
SMD2YLR275W IPK1Q06667 281 aa2.73□□□□□ -1.97
SMD2YLR275W SRO7Q12038 1033 aa2.73□□□□□ -1.97
SMD2YLR275W MRPL8P22353 238 aa2.72□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms