RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeastyeast

Gene CCC1, Length 969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCC1YLR220W YLR460CP54007 376 aa14.29□□□□□ -0.12
CCC1YLR220W TPS1Q00764 495 aaKnown RBP14.29□□□□□ -0.12
CCC1YLR220W NCE101Q02820 53 aa14.29□□□□□ -0.12
CCC1YLR220W DTD1Q07648 150 aaKnown RBP14.29□□□□□ -0.12
CCC1YLR220W YOR389WQ08912 624 aa14.29□□□□□ -0.12
CCC1YLR220W YPL278CQ08990 100 aa14.29□□□□□ -0.12
CCC1YLR220W SAC7P17121 654 aa14.28□□□□□ -0.12
CCC1YLR220W SIC1P38634 284 aa14.28□□□□□ -0.12
CCC1YLR220W SPO73P40031 143 aa14.28□□□□□ -0.12
CCC1YLR220W DCP2P53550 970 aaKnown RBP14.28□□□□□ -0.12
CCC1YLR220W INP1Q03694 420 aa14.28□□□□□ -0.12
CCC1YLR220W URC2Q04411 772 aa14.28□□□□□ -0.12
CCC1YLR220W LOT6Q07923 191 aa14.28□□□□□ -0.12
CCC1YLR220W TPO4Q12256 659 aa14.28□□□□□ -0.12
CCC1YLR220W RRP7P25368 297 aaPredicted RBP14.27□□□□□ -0.13
CCC1YLR220W YHR097CP38809 366 aaKnown RBP14.27□□□□□ -0.13
CCC1YLR220W PRE6P40303 254 aaKnown RBP14.27□□□□□ -0.13
CCC1YLR220W BNA3P47039 444 aaKnown RBP14.27□□□□□ -0.13
CCC1YLR220W YJR115WP47152 169 aa14.27□□□□□ -0.13
CCC1YLR220W TOS2P50078 622 aa14.27□□□□□ -0.13
CCC1YLR220W PRM8P53174 237 aa14.27□□□□□ -0.13
CCC1YLR220W DAM1P53267 343 aa14.27□□□□□ -0.13
CCC1YLR220W DBP6P53734 629 aaKnown RBP14.27□□□□□ -0.13
CCC1YLR220W YPR097WQ06839 1073 aa14.27□□□□□ -0.13
CCC1YLR220W NFI1Q12216 726 aa14.27□□□□□ -0.13
CCC1YLR220W HAA1Q12753 694 aaKnown RBP14.27□□□□□ -0.13
CCC1YLR220W RHO1P06780 209 aaKnown RBP14.26□□□□□ -0.13
CCC1YLR220W RPC82P32349 654 aa14.26□□□□□ -0.13
CCC1YLR220W PEP12P32854 288 aa14.26□□□□□ -0.13
CCC1YLR220W YAR028WP39548 234 aa14.26□□□□□ -0.13
CCC1YLR220W YEL068CP39977 110 aa14.26□□□□□ -0.13
CCC1YLR220W YMR226CQ05016 267 aaKnown RBP14.26□□□□□ -0.13
CCC1YLR220W YPS7Q06325 596 aa14.26□□□□□ -0.13
CCC1YLR220W VPS36Q06696 566 aa14.26□□□□□ -0.13
CCC1YLR220W RAX1Q08760 435 aa14.26□□□□□ -0.13
CCC1YLR220W FMP40Q08968 688 aaPredicted RBP14.26□□□□□ -0.13
CCC1YLR220W SNU114P36048 1008 aaKnown RBP14.25□□□□□ -0.13
CCC1YLR220W TAT2P38967 592 aa14.25□□□□□ -0.13
CCC1YLR220W SYF2P53277 215 aaPredicted RBP14.25□□□□□ -0.13
CCC1YLR220W YPL068CQ02749 293 aa14.25□□□□□ -0.13
CCC1YLR220W YOS9Q99220 542 aa14.25□□□□□ -0.13
CCC1YLR220W RPP2BP02400 110 aaKnown RBP14.24□□□□□ -0.13
CCC1YLR220W RHB1P25378 209 aa14.24□□□□□ -0.13
CCC1YLR220W PTP2P29461 750 aa14.24□□□□□ -0.13
CCC1YLR220W ASF2P32448 525 aaPredicted RBP14.24□□□□□ -0.13
CCC1YLR220W ECM34P38728 170 aa14.24□□□□□ -0.13
CCC1YLR220W ALP1P38971 573 aa14.24□□□□□ -0.13
CCC1YLR220W YRB2P40517 327 aa14.24□□□□□ -0.13
CCC1YLR220W SHR5P41912 237 aa14.24□□□□□ -0.13
CCC1YLR220W MEP3P53390 489 aa14.24□□□□□ -0.13
CCC1YLR220W ENT2Q05785 613 aa14.24□□□□□ -0.13
CCC1YLR220W YLR126CQ12288 251 aa14.24□□□□□ -0.13
CCC1YLR220W SAC1P32368 623 aaKnown RBP14.23□□□□□ -0.13
CCC1YLR220W YMR099CQ03161 297 aaKnown RBP14.23□□□□□ -0.13
CCC1YLR220W ARV1Q06541 321 aa14.23□□□□□ -0.13
CCC1YLR220W SIR3P06701 978 aa14.22□□□□□ -0.13
CCC1YLR220W KGD1P20967 1014 aaKnown RBP14.22□□□□□ -0.13
CCC1YLR220W FAR1P21268 830 aa14.22□□□□□ -0.13
CCC1YLR220W HIR2P32480 875 aa14.22□□□□□ -0.13
CCC1YLR220W CYS4P32582 507 aaKnown RBP14.22□□□□□ -0.13
CCC1YLR220W EMP70P32802 667 aa14.22□□□□□ -0.13
CCC1YLR220W YPT7P32939 208 aa14.22□□□□□ -0.13
CCC1YLR220W BCK2P33306 851 aa14.22□□□□□ -0.13
CCC1YLR220W ECM8P38246 354 aa14.22□□□□□ -0.13
CCC1YLR220W EXO84P38261 753 aa14.22□□□□□ -0.13
CCC1YLR220W YBR285WP38354 144 aa14.22□□□□□ -0.13
CCC1YLR220W COG3P40094 801 aa14.22□□□□□ -0.13
CCC1YLR220W YNL195CP40168 261 aa14.22□□□□□ -0.13
CCC1YLR220W IKS1P47042 667 aa14.22□□□□□ -0.13
CCC1YLR220W YGR168CP53293 376 aa14.22□□□□□ -0.13
CCC1YLR220W PAL1Q05518 499 aaKnown RBP14.22□□□□□ -0.13
CCC1YLR220W YOR376WQ08900 122 aa14.22□□□□□ -0.13
CCC1YLR220W TAD3Q9URQ3 322 aa14.22□□□□□ -0.13
CCC1YLR220W FLP1P03870 423 aa14.21□□□□□ -0.13
CCC1YLR220W DAT1P13483 248 aaKnown RBP14.21□□□□□ -0.13
CCC1YLR220W ITR2P30606 609 aa14.21□□□□□ -0.13
CCC1YLR220W PEX18P38855 283 aa14.21□□□□□ -0.13
CCC1YLR220W SER3P40054 469 aa14.21□□□□□ -0.13
CCC1YLR220W CRT10Q08226 957 aa14.21□□□□□ -0.13
CCC1YLR220W BRX1Q08235 291 aaKnown RBP14.21□□□□□ -0.13
CCC1YLR220W PRP46Q12417 451 aaPredicted RBP14.21□□□□□ -0.13
CCC1YLR220W GCN1P33892 2672 aaKnown RBP14.2□□□□□ -0.14
CCC1YLR220W RPC40P07703 335 aaKnown RBP14.2□□□□□ -0.14
CCC1YLR220W SEC62P21825 274 aa14.2□□□□□ -0.14
CCC1YLR220W ECM15P35195 104 aa14.2□□□□□ -0.14
CCC1YLR220W SRO77P38163 1010 aa14.2□□□□□ -0.14
CCC1YLR220W NSG1P38837 291 aa14.2□□□□□ -0.14
CCC1YLR220W YHR219WP38900 624 aa14.2□□□□□ -0.14
CCC1YLR220W HRB1P38922 454 aaKnown RBP RIP-Chip data14.2□□□□□ -0.14not detected
CCC1YLR220W YOL024WQ08172 172 aa14.2□□□□□ -0.14
CCC1YLR220W YPR015CQ12531 247 aa14.2□□□□□ -0.14
CCC1YLR220W YPL119C-AQ3E751 87 aa14.2□□□□□ -0.14
CCC1YLR220W COG5P53951 403 aa14.19□□□□□ -0.14
CCC1YLR220W YSA1Q01976 231 aa14.19□□□□□ -0.14
CCC1YLR220W YOR032W-AQ8TGS1 66 aa14.19□□□□□ -0.14
CCC1YLR220W ARF1P11076 181 aaKnown RBP14.18□□□□□ -0.14
CCC1YLR220W CWH43P25618 953 aa14.18□□□□□ -0.14
CCC1YLR220W CPR3P25719 182 aa14.18□□□□□ -0.14
CCC1YLR220W SEF1P34228 1148 aa14.18□□□□□ -0.14
CCC1YLR220W GVP36P40531 326 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms