RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C RPL12AP0CX53 165 aaKnown RBP2.64□□□□□ -1.99
YPT52YKR014C RPL12BP0CX54 165 aa2.64□□□□□ -1.99
YPT52YKR014C GPX2P38143 162 aa2.64□□□□□ -1.99
YPT52YKR014C QDR3P38227 689 aa2.64□□□□□ -1.99
YPT52YKR014C LSM12P38828 187 aaKnown RBP2.64□□□□□ -1.99
YPT52YKR014C ROG1P53118 685 aa2.64□□□□□ -1.99
YPT52YKR014C YDL199CQ12407 687 aa2.64□□□□□ -1.99
YPT52YKR014C OPI3P05375 206 aa2.63□□□□□ -1.99
YPT52YKR014C GIT1P25346 518 aa2.63□□□□□ -1.99
YPT52YKR014C FUN26P31381 517 aa2.63□□□□□ -1.99
YPT52YKR014C PUP2P32379 260 aa2.63□□□□□ -1.99
YPT52YKR014C DPH2P32461 534 aa2.63□□□□□ -1.99
YPT52YKR014C VPH1P32563 840 aaKnown RBP2.63□□□□□ -1.99
YPT52YKR014C TIR2P33890 251 aa2.63□□□□□ -1.99
YPT52YKR014C SOL2P37262 315 aa2.63□□□□□ -1.99
YPT52YKR014C PEX22P39718 180 aa2.63□□□□□ -1.99
YPT52YKR014C ALD5P40047 520 aaKnown RBP2.63□□□□□ -1.99
YPT52YKR014C EFM4P40516 257 aa2.63□□□□□ -1.99
YPT52YKR014C YFL012WP43580 148 aa2.63□□□□□ -1.99
YPT52YKR014C REX2P54964 269 aaKnown RBP2.63□□□□□ -1.99
YPT52YKR014C YDR541CQ03049 344 aa2.63□□□□□ -1.99
YPT52YKR014C ECM7Q06200 448 aa2.63□□□□□ -1.99
YPT52YKR014C IES4Q08561 116 aa2.63□□□□□ -1.99
YPT52YKR014C RPN5Q12250 445 aaKnown RBP2.63□□□□□ -1.99
YPT52YKR014C RNH203Q12338 110 aa2.63□□□□□ -1.99
YPT52YKR014C ADH1P00330 348 aaKnown RBP2.62□□□□□ -1.99
YPT52YKR014C ZUO1P32527 433 aaKnown RBP2.62□□□□□ -1.99
YPT52YKR014C YSC83P32792 385 aa2.62□□□□□ -1.99
YPT52YKR014C KAP104P38217 918 aaKnown RBP2.62□□□□□ -1.99
YPT52YKR014C BMT2P38278 337 aa2.62□□□□□ -1.99
YPT52YKR014C TRF5P48561 642 aaKnown RBP2.62□□□□□ -1.99
YPT52YKR014C CWC22P53333 577 aaKnown RBP2.62□□□□□ -1.99
YPT52YKR014C URC2Q04411 772 aa2.62□□□□□ -1.99
YPT52YKR014C AAD15Q08361 143 aa2.62□□□□□ -1.99
YPT52YKR014C RPS18AP0CX55 146 aaKnown RBP2.61□□□□□ -1.99
YPT52YKR014C RPS18BP0CX56 146 aaPredicted RBP2.61□□□□□ -1.99
YPT52YKR014C ASP3-2P0CX77 362 aa2.61□□□□□ -1.99
YPT52YKR014C ASP3-3P0CX78 362 aa2.61□□□□□ -1.99
YPT52YKR014C ASP3-4P0CX79 362 aa2.61□□□□□ -1.99
YPT52YKR014C ASP3-1P0CZ17 362 aa2.61□□□□□ -1.99
YPT52YKR014C RRP7P25368 297 aaPredicted RBP2.61□□□□□ -1.99
YPT52YKR014C SPO23P33757 523 aa2.61□□□□□ -1.99
YPT52YKR014C YGR018CP53211 109 aa2.61□□□□□ -1.99
YPT52YKR014C RTT102P53330 157 aa2.61□□□□□ -1.99
YPT52YKR014C ASA1Q06822 443 aa2.61□□□□□ -1.99
YPT52YKR014C LDS2Q08218 356 aa2.61□□□□□ -1.99
YPT52YKR014C RPL1AP0CX43 217 aaKnown RBP2.6□□□□□ -1.99
YPT52YKR014C RPL1BP0CX44 217 aaKnown RBP2.6□□□□□ -1.99
YPT52YKR014C CMK2P22517 447 aa2.6□□□□□ -1.99
YPT52YKR014C WSC4P38739 605 aa2.6□□□□□ -1.99
YPT52YKR014C YER184CP39961 794 aa2.6□□□□□ -1.99
YPT52YKR014C SEC27P41811 889 aaKnown RBP2.6□□□□□ -1.99
YPT52YKR014C VHT1P53241 593 aa2.6□□□□□ -1.99
YPT52YKR014C RRN9P53437 365 aa2.6□□□□□ -1.99
YPT52YKR014C RPL21AQ02753 160 aaKnown RBP2.6□□□□□ -1.99
YPT52YKR014C MSC3Q05812 728 aa2.6□□□□□ -1.99
YPT52YKR014C NDL1Q06568 189 aa2.6□□□□□ -1.99
YPT52YKR014C LDB17Q12342 491 aa2.6□□□□□ -1.99
YPT52YKR014C RPL21BQ12672 160 aaKnown RBP2.6□□□□□ -1.99
YPT52YKR014C ECT1P33412 323 aa2.59□□□□□ -1.99
YPT52YKR014C MRPL27P36526 146 aaPredicted RBP2.59□□□□□ -1.99
YPT52YKR014C SLX1P38324 304 aa2.59□□□□□ -1.99
YPT52YKR014C YGR016WP53209 190 aa2.59□□□□□ -1.99
YPT52YKR014C EOS1P53938 366 aa2.59□□□□□ -1.99
YPT52YKR014C ENT5Q03769 411 aaKnown RBP2.59□□□□□ -1.99
YPT52YKR014C MSP1P28737 362 aa2.58□□□□□ -2
YPT52YKR014C LDS1P31379 325 aa2.58□□□□□ -2
YPT52YKR014C WSS1P38838 269 aa2.58□□□□□ -2
YPT52YKR014C CAJ1P39101 391 aa2.58□□□□□ -2
YPT52YKR014C PGU1P47180 361 aa2.58□□□□□ -2
YPT52YKR014C FRE6Q12473 712 aa2.58□□□□□ -2
YPT52YKR014C RPL6BP05739 176 aaKnown RBP2.57□□□□□ -2
YPT52YKR014C MRPL8P22353 238 aa2.57□□□□□ -2
YPT52YKR014C RPL16AP26784 199 aaKnown RBP2.57□□□□□ -2
YPT52YKR014C PFF1P38244 976 aa2.57□□□□□ -2
YPT52YKR014C MNL1P38888 796 aa2.57□□□□□ -2
YPT52YKR014C ASN2P49090 572 aaKnown RBP2.57□□□□□ -2
YPT52YKR014C TOS2P50078 622 aa2.57□□□□□ -2
YPT52YKR014C PMT5P52867 743 aa2.57□□□□□ -2
YPT52YKR014C RPL6AQ02326 176 aaKnown RBP2.57□□□□□ -2
YPT52YKR014C YDR115WQ04598 105 aa2.57□□□□□ -2
YPT52YKR014C RAX2Q12465 1220 aa2.57□□□□□ -2
YPT52YKR014C SRN2Q99176 213 aa2.57□□□□□ -2
YPT52YKR014C RNA1P11745 407 aaKnown RBP2.56□□□□□ -2
YPT52YKR014C ANP1P32629 500 aa2.56□□□□□ -2
YPT52YKR014C COS9P36034 407 aa2.56□□□□□ -2
YPT52YKR014C GDT1P38301 280 aaPredicted RBP2.56□□□□□ -2
YPT52YKR014C ATP22P50273 684 aaPredicted RBP2.56□□□□□ -2
YPT52YKR014C MLC1P53141 149 aa2.56□□□□□ -2
YPT52YKR014C PRP38Q00723 242 aaPredicted RBP2.56□□□□□ -2
YPT52YKR014C FSH2Q05015 223 aa2.56□□□□□ -2
YPT52YKR014C YHC1Q05900 231 aaKnown RBP2.56□□□□□ -2
YPT52YKR014C YLR177WQ06251 628 aa2.56□□□□□ -2
YPT52YKR014C NFI1Q12216 726 aa2.56□□□□□ -2
YPT52YKR014C YDR061WQ12298 539 aa2.56□□□□□ -2
YPT52YKR014C SFM1Q12314 213 aa2.56□□□□□ -2
YPT52YKR014C SKS1Q12505 502 aa2.56□□□□□ -2
YPT52YKR014C HEM4P06174 275 aa2.55□□□□□ -2
YPT52YKR014C RPS19AP07280 144 aaKnown RBP2.55□□□□□ -2
YPT52YKR014C RPS19BP07281 144 aaPredicted RBP2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms