RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOA1	YKL213C	SUL2	Q12325	893 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	NSI1	Q12457	570 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	CAR1	P00812	333 aa	Known RBP	4.65	□□□□□ -1.67
DOA1	YKL213C	RPL1A	P0CX43	217 aa	Known RBP	4.65	□□□□□ -1.67
DOA1	YKL213C	RPL1B	P0CX44	217 aa	Known RBP	4.65	□□□□□ -1.67
DOA1	YKL213C	CKA1	P15790	372 aa		4.65	□□□□□ -1.67
DOA1	YKL213C	CDC23	P16522	626 aa		4.65	□□□□□ -1.67
DOA1	YKL213C	APA2	P22108	325 aa		4.65	□□□□□ -1.67
DOA1	YKL213C	MVD1	P32377	396 aa	Known RBP	4.65	□□□□□ -1.67
DOA1	YKL213C	TCA17	P32613	152 aa		4.65	□□□□□ -1.67
DOA1	YKL213C	SUI1	P32911	108 aa	Known RBP	4.65	□□□□□ -1.67
DOA1	YKL213C	SIP2	P34164	415 aa	Known RBP	4.65	□□□□□ -1.67
DOA1	YKL213C	ELO1	P39540	310 aa		4.65	□□□□□ -1.67
DOA1	YKL213C	SSU1	P41930	458 aa		4.65	□□□□□ -1.67
DOA1	YKL213C	FAR7	P43592	221 aa		4.65	□□□□□ -1.67
DOA1	YKL213C	YFR020W	P43600	232 aa		4.65	□□□□□ -1.67
DOA1	YKL213C	CIS3	P47001	227 aa		4.65	□□□□□ -1.67
DOA1	YKL213C	YPT32	P51996	222 aa	Known RBP	4.65	□□□□□ -1.67
DOA1	YKL213C	LGE1	Q02796	332 aa	Known RBP	4.65	□□□□□ -1.67
DOA1	YKL213C	VHS1	Q03785	461 aa		4.65	□□□□□ -1.67
DOA1	YKL213C	GLO2	Q05584	274 aa		4.65	□□□□□ -1.67
DOA1	YKL213C	FAR10	Q06001	478 aa		4.65	□□□□□ -1.67
DOA1	YKL213C	DIA2	Q08496	732 aa	Predicted RBP	4.65	□□□□□ -1.67
DOA1	YKL213C	GUP2	Q08929	609 aa		4.65	□□□□□ -1.67
DOA1	YKL213C	YPL245W	Q12179	454 aa	Known RBP	4.65	□□□□□ -1.67
DOA1	YKL213C	FYV7	Q12247	151 aa		4.65	□□□□□ -1.67
DOA1	YKL213C	YPR011C	Q12251	326 aa		4.65	□□□□□ -1.67
DOA1	YKL213C	RGT2	Q12300	763 aa		4.65	□□□□□ -1.67
DOA1	YKL213C	HRP1	Q99383	534 aa	Known RBP	4.65	□□□□□ -1.67
DOA1	YKL213C	MDM35	O60200	86 aa		4.64	□□□□□ -1.67
DOA1	YKL213C	AI3	P03877	415 aa		4.64	□□□□□ -1.67
DOA1	YKL213C	RPL35A	P0CX84	120 aa	Known RBP	4.64	□□□□□ -1.67
DOA1	YKL213C	RPL35B	P0CX85	120 aa	Known RBP	4.64	□□□□□ -1.67
DOA1	YKL213C	DBR1	P24309	405 aa	Known RBP	4.64	□□□□□ -1.67
DOA1	YKL213C	RAD14	P28519	371 aa		4.64	□□□□□ -1.67
DOA1	YKL213C	PTC1	P35182	281 aa		4.64	□□□□□ -1.67
DOA1	YKL213C	TRM7	P38238	310 aa	Known RBP	4.64	□□□□□ -1.67
DOA1	YKL213C	ARN1	P38731	627 aa		4.64	□□□□□ -1.67
DOA1	YKL213C	YAL037W	P39728	267 aa		4.64	□□□□□ -1.67
DOA1	YKL213C	DLD3	P39976	496 aa	Known RBP	4.64	□□□□□ -1.67
DOA1	YKL213C	YER085C	P40058	173 aa		4.64	□□□□□ -1.67
DOA1	YKL213C	SEH1	P53011	349 aa	Known RBP	4.64	□□□□□ -1.67
DOA1	YKL213C	SGF73	P53165	657 aa		4.64	□□□□□ -1.67
DOA1	YKL213C	TWF1	P53250	332 aa		4.64	□□□□□ -1.67
DOA1	YKL213C	VOA1	P53262	265 aa		4.64	□□□□□ -1.67
DOA1	YKL213C	NAM8	Q00539	523 aa	Known RBP	4.64	□□□□□ -1.67
DOA1	YKL213C	ISU1	Q03020	165 aa		4.64	□□□□□ -1.67
DOA1	YKL213C	YMR265C	Q03508	461 aa	Known RBP	4.64	□□□□□ -1.67
DOA1	YKL213C	CTK1	Q03957	528 aa	Known RBP	4.64	□□□□□ -1.67
DOA1	YKL213C	YML096W	Q04489	525 aa		4.64	□□□□□ -1.67
DOA1	YKL213C	MSC3	Q05812	728 aa		4.64	□□□□□ -1.67
DOA1	YKL213C	YLR413W	Q06689	675 aa		4.64	□□□□□ -1.67
DOA1	YKL213C	ATP6	P00854	259 aa		4.64	□□□□□ -1.67
DOA1	YKL213C	CDC9	P04819	755 aa		4.64	□□□□□ -1.67
DOA1	YKL213C	RPP1A	P05318	106 aa	Predicted RBP	4.64	□□□□□ -1.67
DOA1	YKL213C	HOP1	P20050	605 aa		4.64	□□□□□ -1.67
DOA1	YKL213C	ATP7	P30902	174 aa		4.64	□□□□□ -1.67
DOA1	YKL213C	MLS1	P30952	554 aa		4.64	□□□□□ -1.67
DOA1	YKL213C	HXT4	P32467	576 aa		4.64	□□□□□ -1.67
DOA1	YKL213C	IMD2	P38697	523 aa	Known RBP	4.64	□□□□□ -1.67
DOA1	YKL213C	LEU5	P38702	357 aa		4.64	□□□□□ -1.67
DOA1	YKL213C	WSS1	P38838	269 aa		4.64	□□□□□ -1.67
DOA1	YKL213C	PUS4	P48567	403 aa	Known RBP	4.64	□□□□□ -1.67
DOA1	YKL213C	NAS6	P50086	228 aa		4.64	□□□□□ -1.67
DOA1	YKL213C	SLI1	P53304	468 aa		4.64	□□□□□ -1.67
DOA1	YKL213C	OGG1	P53397	376 aa	Predicted RBP	4.64	□□□□□ -1.67
DOA1	YKL213C	PDR16	P53860	351 aa	Known RBP	4.64	□□□□□ -1.67
DOA1	YKL213C	YDC1	Q02896	317 aa		4.64	□□□□□ -1.67
DOA1	YKL213C	YLR456W	Q06199	204 aa		4.64	□□□□□ -1.67
DOA1	YKL213C	HUA2	Q12134	243 aa		4.64	□□□□□ -1.67
DOA1	YKL213C	RKM5	Q12367	367 aa		4.64	□□□□□ -1.67
DOA1	YKL213C	RPN6	Q12377	434 aa		4.64	□□□□□ -1.67
DOA1	YKL213C	CMR1	Q12510	522 aa	Known RBP	4.64	□□□□□ -1.67
DOA1	YKL213C	RPS17A	P02407	136 aa	Known RBP	4.63	□□□□□ -1.67
DOA1	YKL213C	MATALPHA1	P0CY06	175 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	HMLALPHA1	P0CY07	175 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	RPS17B	P14127	136 aa	Known RBP	4.63	□□□□□ -1.67
DOA1	YKL213C	CNA1	P23287	553 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	RHB1	P25378	209 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	GSH1	P32477	678 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	MRT4	P33201	236 aa	Known RBP	4.63	□□□□□ -1.67
DOA1	YKL213C	NTR2	P36118	322 aa	Predicted RBP	4.63	□□□□□ -1.67
DOA1	YKL213C	DAD2	P36162	133 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	MAL32	P38158	584 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	YBL029W	P38201	376 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	FIG1	P38224	298 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	YER010C	P40011	234 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	ALK1	P43633	760 aa	Known RBP	4.63	□□□□□ -1.67
DOA1	YKL213C	HXT16	P47185	567 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	USE1	P53146	245 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	YGR053C	P53234	283 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	MAL12	P53341	584 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	COS6	P53344	381 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	DIA1	P54005	336 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	HXT15	P54854	567 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	SDH1	Q00711	640 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	NOG1	Q02892	647 aa	Known RBP	4.63	□□□□□ -1.67
DOA1	YKL213C	YET2	Q04210	160 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	MHR1	Q06630	226 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	SGT1	Q08446	395 aa		4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms