RNA–Protein interactions for RNA: YKL170W

MRPL38, Transcript of Mitochondrial ribosomal protein of the large subunit, yeast

Gene MRPL38, Length 417 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRPL38	YKL170W	RPT5	P33297	434 aa	Known RBP	2.75	□□□□□ -1.97
MRPL38	YKL170W	BUD2	P33314	1104 aa		2.75	□□□□□ -1.97
MRPL38	YKL170W	ECT1	P33412	323 aa		2.75	□□□□□ -1.97
MRPL38	YKL170W	PEX32	P38292	413 aa		2.75	□□□□□ -1.97
MRPL38	YKL170W	TAE1	P38340	232 aa		2.75	□□□□□ -1.97
MRPL38	YKL170W	YAL037W	P39728	267 aa		2.75	□□□□□ -1.97
MRPL38	YKL170W	RTR1	P40084	226 aa	Predicted RBP	2.75	□□□□□ -1.97
MRPL38	YKL170W	BNA6	P43619	295 aa		2.75	□□□□□ -1.97
MRPL38	YKL170W	YDL186W	P48568	277 aa		2.75	□□□□□ -1.97
MRPL38	YKL170W	GPI1	P53306	609 aa		2.75	□□□□□ -1.97
MRPL38	YKL170W	SOL4	P53315	255 aa		2.75	□□□□□ -1.97
MRPL38	YKL170W	BUD32	P53323	261 aa		2.75	□□□□□ -1.97
MRPL38	YKL170W	RET3	P53600	189 aa		2.75	□□□□□ -1.97
MRPL38	YKL170W	PGA2	P53903	129 aa		2.75	□□□□□ -1.97
MRPL38	YKL170W	YNL134C	P53912	376 aa	Known RBP	2.75	□□□□□ -1.97
MRPL38	YKL170W	YPL014W	Q02606	381 aa		2.75	□□□□□ -1.97
MRPL38	YKL170W	CTL1	Q03220	320 aa	Known RBP	2.75	□□□□□ -1.97
MRPL38	YKL170W	YDR387C	Q04162	555 aa		2.75	□□□□□ -1.97
MRPL38	YKL170W	URH1	Q04179	340 aa		2.75	□□□□□ -1.97
MRPL38	YKL170W	URC2	Q04411	772 aa		2.75	□□□□□ -1.97
MRPL38	YKL170W	BUR2	Q05949	395 aa		2.75	□□□□□ -1.97
MRPL38	YKL170W	DNL4	Q08387	944 aa	Predicted RBP	2.75	□□□□□ -1.97
MRPL38	YKL170W	CLP1	Q08685	445 aa	Predicted RBP	2.75	□□□□□ -1.97
MRPL38	YKL170W	ATG34	Q12292	412 aa		2.75	□□□□□ -1.97
MRPL38	YKL170W	YPR1	Q12458	312 aa		2.75	□□□□□ -1.97
MRPL38	YKL170W	FSH3	Q99369	266 aa		2.75	□□□□□ -1.97
MRPL38	YKL170W	SSK22	P25390	1331 aa	Predicted RBP	2.74	□□□□□ -1.97
MRPL38	YKL170W	POL1	P13382	1468 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	IMA3	P0CW40	589 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	IMA4	P0CW41	589 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	ARF1	P11076	181 aa	Known RBP	2.74	□□□□□ -1.97
MRPL38	YKL170W	CLN3	P13365	580 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	DBR1	P24309	405 aa	Known RBP	2.74	□□□□□ -1.97
MRPL38	YKL170W	MGR1	P25573	417 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	RPL5	P26321	297 aa	Known RBP	2.74	□□□□□ -1.97
MRPL38	YKL170W	PPZ1	P26570	692 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	HXT1	P32465	570 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	EFB1	P32471	206 aa	Known RBP	2.74	□□□□□ -1.97
MRPL38	YKL170W	PRS1	P32895	427 aa	Known RBP	2.74	□□□□□ -1.97
MRPL38	YKL170W	MNS1	P32906	549 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	PDR3	P33200	976 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	YNK1	P36010	153 aa	Known RBP	2.74	□□□□□ -1.97
MRPL38	YKL170W	DOA1	P36037	715 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	YBR056W	P38081	501 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	ARP1	P38696	384 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	LEU5	P38702	357 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	YHR045W	P38775	560 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	YHR177W	P38867	453 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	PHO90	P39535	881 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	SCC4	P40090	624 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	FAU1	P40099	211 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	YMR134W	P40207	237 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	FMC1	P40491	155 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	LYS12	P40495	371 aa	Known RBP	2.74	□□□□□ -1.97
MRPL38	YKL170W	UTP25	P40498	721 aa	Known RBP	2.74	□□□□□ -1.97
MRPL38	YKL170W	YIL060W	P40519	144 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	CDC40	P40968	455 aa	Predicted RBP	2.74	□□□□□ -1.97
MRPL38	YKL170W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	2.74	□□□□□ -1.97	RIP-Chip
MRPL38	YKL170W	TRS85	P46944	698 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	DRN1	P53255	507 aa	Known RBP	2.74	□□□□□ -1.97
MRPL38	YKL170W	RHO4	Q00246	291 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	SRL4	Q03085	281 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	ARP10	Q04549	284 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	YMR254C	Q04838	102 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	YMR317W	Q04893	1140 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	IVY1	Q04934	453 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	SSQ1	Q05931	657 aa	Predicted RBP	2.74	□□□□□ -1.97
MRPL38	YKL170W	MDM36	Q06820	579 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	YDL218W	Q07629	317 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	IMA2	Q08295	589 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	SGT1	Q08446	395 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	BTS1	Q12051	335 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	RNH203	Q12338	110 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	EDE1	P34216	1381 aa		2.74	□□□□□ -1.97
MRPL38	YKL170W	YBT1	P32386	1661 aa		2.73	□□□□□ -1.97
MRPL38	YKL170W	OPI3	P05375	206 aa		2.73	□□□□□ -1.97
MRPL38	YKL170W	RPL12A	P0CX53	165 aa	Known RBP	2.73	□□□□□ -1.97
MRPL38	YKL170W	RPL12B	P0CX54	165 aa		2.73	□□□□□ -1.97
MRPL38	YKL170W	EXO70	P19658	623 aa		2.73	□□□□□ -1.97
MRPL38	YKL170W	YCR007C	P25354	239 aa		2.73	□□□□□ -1.97
MRPL38	YKL170W	YCR016W	P25617	290 aa	Known RBP	2.73	□□□□□ -1.97
MRPL38	YKL170W	ACH1	P32316	526 aa		2.73	□□□□□ -1.97
MRPL38	YKL170W	ERG1	P32476	496 aa	Known RBP	2.73	□□□□□ -1.97
MRPL38	YKL170W	MEI5	P32489	222 aa		2.73	□□□□□ -1.97
MRPL38	YKL170W	UTR4	P32626	227 aa		2.73	□□□□□ -1.97
MRPL38	YKL170W	RAD23	P32628	398 aa	Known RBP	2.73	□□□□□ -1.97
MRPL38	YKL170W	COX13	P32799	129 aa		2.73	□□□□□ -1.97
MRPL38	YKL170W	SKN1	P33336	771 aa		2.73	□□□□□ -1.97
MRPL38	YKL170W	YKL071W	P36086	256 aa		2.73	□□□□□ -1.97
MRPL38	YKL170W	RIM2	P38127	377 aa		2.73	□□□□□ -1.97
MRPL38	YKL170W	STP2	P38704	541 aa		2.73	□□□□□ -1.97
MRPL38	YKL170W	SIP3	P38717	1229 aa		2.73	□□□□□ -1.97
MRPL38	YKL170W	YER085C	P40058	173 aa		2.73	□□□□□ -1.97
MRPL38	YKL170W	LCP5	P40079	357 aa	Predicted RBP	2.73	□□□□□ -1.97
MRPL38	YKL170W	SEC9	P40357	651 aa		2.73	□□□□□ -1.97
MRPL38	YKL170W	MSS2	P40990	351 aa		2.73	□□□□□ -1.97
MRPL38	YKL170W	MRX5	P47007	382 aa		2.73	□□□□□ -1.97
MRPL38	YKL170W	HMS2	P47175	358 aa		2.73	□□□□□ -1.97
MRPL38	YKL170W	PCP1	P53259	346 aa		2.73	□□□□□ -1.97
MRPL38	YKL170W	YGR168C	P53293	376 aa		2.73	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms