RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W MRPL9P31334 269 aa6.03□□□□□ -1.44
GEF1YJR040W PMT1P33775 817 aa6.03□□□□□ -1.44
GEF1YJR040W YPT52P36018 234 aaKnown RBP6.03□□□□□ -1.44
GEF1YJR040W TIF11P38912 153 aaKnown RBP6.03□□□□□ -1.44
GEF1YJR040W TY1A-JR2P47099 440 aa6.03□□□□□ -1.44
GEF1YJR040W PRM8P53174 237 aa6.03□□□□□ -1.44
GEF1YJR040W SWC4P53201 476 aa6.03□□□□□ -1.44
GEF1YJR040W NQM1P53228 333 aaPredicted RBP6.03□□□□□ -1.44
GEF1YJR040W TY1A-DR1Q03856 440 aa6.03□□□□□ -1.44
GEF1YJR040W SSL1Q04673 461 aaPredicted RBP6.03□□□□□ -1.44
GEF1YJR040W TY1A-ML1Q04706 440 aaKnown RBP6.03□□□□□ -1.44
GEF1YJR040W YLR283WQ05867 314 aa6.03□□□□□ -1.44
GEF1YJR040W VPS74Q06385 345 aa6.03□□□□□ -1.44
GEF1YJR040W IRC10Q08118 586 aa6.03□□□□□ -1.44
GEF1YJR040W TY1A-BRQ12217 440 aa6.03□□□□□ -1.44
GEF1YJR040W TY1A-NL2Q12470 440 aa6.03□□□□□ -1.44
GEF1YJR040W TY1A-GR2Q12485 440 aa6.03□□□□□ -1.44
GEF1YJR040W RPP1AP05318 106 aaPredicted RBP6.02□□□□□ -1.45
GEF1YJR040W CDC4P07834 779 aa6.02□□□□□ -1.45
GEF1YJR040W PUP1P25043 261 aa6.02□□□□□ -1.45
GEF1YJR040W PET127P32606 800 aa6.02□□□□□ -1.45
GEF1YJR040W TIP20P33891 701 aa6.02□□□□□ -1.45
GEF1YJR040W AAD14P42884 376 aa6.02□□□□□ -1.45
GEF1YJR040W YNL181WP53878 407 aa6.02□□□□□ -1.45
GEF1YJR040W IDP3P53982 420 aaKnown RBP6.02□□□□□ -1.45
GEF1YJR040W MRPS16Q02608 121 aa6.02□□□□□ -1.45
GEF1YJR040W ARV1Q06541 321 aa6.02□□□□□ -1.45
GEF1YJR040W MHR1Q06630 226 aa6.02□□□□□ -1.45
GEF1YJR040W RAD34Q06665 692 aa6.02□□□□□ -1.45
GEF1YJR040W FRE5Q08908 694 aa6.02□□□□□ -1.45
GEF1YJR040W RPN5Q12250 445 aaKnown RBP6.02□□□□□ -1.45
GEF1YJR040W YPR117WQ06116 2489 aa6.02□□□□□ -1.45
GEF1YJR040W YHR033WP38690 423 aa6.02□□□□□ -1.45
GEF1YJR040W FMO1P38866 432 aa6.02□□□□□ -1.45
GEF1YJR040W SEN34P39707 275 aa6.02□□□□□ -1.45
GEF1YJR040W CAK1P43568 368 aaPredicted RBP6.02□□□□□ -1.45
GEF1YJR040W TIM54P47045 478 aa6.02□□□□□ -1.45
GEF1YJR040W SOK2P53438 785 aaPredicted RBP6.02□□□□□ -1.45
GEF1YJR040W ERV25P54837 211 aaKnown RBP6.02□□□□□ -1.45
GEF1YJR040W REC102Q02721 264 aa6.02□□□□□ -1.45
GEF1YJR040W YOR283WQ12040 230 aaKnown RBP6.02□□□□□ -1.45
GEF1YJR040W CMC2Q3E7A4 109 aa6.02□□□□□ -1.45
GEF1YJR040W ISN1Q99312 450 aa6.02□□□□□ -1.45
GEF1YJR040W YMR084WA2P2R3 262 aa6.01□□□□□ -1.45
GEF1YJR040W CDC21P06785 304 aa6.01□□□□□ -1.45
GEF1YJR040W UNG1P12887 359 aa6.01□□□□□ -1.45
GEF1YJR040W FUS3P16892 353 aaKnown RBP6.01□□□□□ -1.45
GEF1YJR040W RER1P25560 188 aa6.01□□□□□ -1.45
GEF1YJR040W COQ2P32378 372 aa6.01□□□□□ -1.45
GEF1YJR040W CDC13P32797 924 aaKnown RBP6.01□□□□□ -1.45
GEF1YJR040W PRP18P33411 251 aaPredicted RBP6.01□□□□□ -1.45
GEF1YJR040W SPT23P35210 1082 aa6.01□□□□□ -1.45
GEF1YJR040W RCK1P38622 512 aa6.01□□□□□ -1.45
GEF1YJR040W GEP4P38812 185 aa6.01□□□□□ -1.45
GEF1YJR040W RSP5P39940 809 aaKnown RBP6.01□□□□□ -1.45
GEF1YJR040W MAD2P40958 196 aa6.01□□□□□ -1.45
GEF1YJR040W TOM22P49334 152 aa6.01□□□□□ -1.45
GEF1YJR040W CWC24P53769 259 aa6.01□□□□□ -1.45
GEF1YJR040W TIM44Q01852 431 aa6.01□□□□□ -1.45
GEF1YJR040W RRN5Q02983 363 aa6.01□□□□□ -1.45
GEF1YJR040W PRM15Q03262 622 aa6.01□□□□□ -1.45
GEF1YJR040W YMD8Q03697 442 aa6.01□□□□□ -1.45
GEF1YJR040W AIM36Q03798 255 aa6.01□□□□□ -1.45
GEF1YJR040W HPF1Q05164 967 aa6.01□□□□□ -1.45
GEF1YJR040W SPO77Q06134 477 aa6.01□□□□□ -1.45
GEF1YJR040W CDA2Q06703 312 aa6.01□□□□□ -1.45
GEF1YJR040W MCA1Q08601 432 aa6.01□□□□□ -1.45
GEF1YJR040W RRG7Q08774 242 aaPredicted RBP6.01□□□□□ -1.45
GEF1YJR040W BMT6Q12291 365 aa6.01□□□□□ -1.45
GEF1YJR040W PNS1Q12412 539 aa6.01□□□□□ -1.45
GEF1YJR040W SUS1Q6WNK7 96 aa6.01□□□□□ -1.45
GEF1YJR040W REP2P03872 296 aa6□□□□□ -1.45
GEF1YJR040W CPA1P07258 411 aaKnown RBP6□□□□□ -1.45
GEF1YJR040W GUT1P32190 709 aa6□□□□□ -1.45
GEF1YJR040W GSH1P32477 678 aa6□□□□□ -1.45
GEF1YJR040W SEC17P32602 292 aa6□□□□□ -1.45
GEF1YJR040W AFR1P33304 620 aa6□□□□□ -1.45
GEF1YJR040W DHR2P36009 735 aaPredicted RBP6□□□□□ -1.45
GEF1YJR040W COS111P38308 924 aa6□□□□□ -1.45
GEF1YJR040W HSE1P38753 452 aa6□□□□□ -1.45
GEF1YJR040W HRB1P38922 454 aaKnown RBP RIP-Chip data6□□□□□ -1.45not detected
GEF1YJR040W RFC2P40348 353 aa6□□□□□ -1.45
GEF1YJR040W MPM1P40364 252 aa6□□□□□ -1.45
GEF1YJR040W NNF1P47149 201 aa6□□□□□ -1.45
GEF1YJR040W YNR061CP53747 219 aa6□□□□□ -1.45
GEF1YJR040W LSM7P53905 115 aaKnown RBP6□□□□□ -1.45
GEF1YJR040W AAC3P18238 307 aa6□□□□□ -1.45
GEF1YJR040W EPT1P22140 391 aa6□□□□□ -1.45
GEF1YJR040W SYP1P25623 870 aaKnown RBP6□□□□□ -1.45
GEF1YJR040W SNC1P31109 117 aa6□□□□□ -1.45
GEF1YJR040W THI80P35202 319 aa6□□□□□ -1.45
GEF1YJR040W SRY1P36007 326 aa6□□□□□ -1.45
GEF1YJR040W IML3P38265 245 aa6□□□□□ -1.45
GEF1YJR040W CCZ1P38273 704 aa6□□□□□ -1.45
GEF1YJR040W MBA1P38300 278 aa6□□□□□ -1.45
GEF1YJR040W GDI1P39958 451 aaKnown RBP6□□□□□ -1.45
GEF1YJR040W YJR141WP47172 347 aaPredicted RBP6□□□□□ -1.45
GEF1YJR040W RNH70P53331 553 aa6□□□□□ -1.45
GEF1YJR040W EAF1Q06337 982 aa6□□□□□ -1.45
GEF1YJR040W YDL086WQ07505 273 aa6□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms