RNA–Protein interactions for RNA: YJL010C

NOP9, Transcript of Essential subunit of U3-containing 90S preribosome, yeast

Gene NOP9, Length 2,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOP9	YJL010C	DPH2	P32461	534 aa		0.84	□□□□□ -2.28
NOP9	YJL010C	SPO23	P33757	523 aa		0.84	□□□□□ -2.28
NOP9	YJL010C	LTV1	P34078	463 aa		0.84	□□□□□ -2.28
NOP9	YJL010C	MRPL27	P36526	146 aa	Predicted RBP	0.84	□□□□□ -2.28
NOP9	YJL010C	PAC11	P40960	533 aa		0.84	□□□□□ -2.28
NOP9	YJL010C	YFL012W	P43580	148 aa		0.84	□□□□□ -2.28
NOP9	YJL010C	TRF5	P48561	642 aa	Known RBP	0.84	□□□□□ -2.28
NOP9	YJL010C	ERO1	Q03103	563 aa		0.84	□□□□□ -2.28
NOP9	YJL010C	ENT5	Q03769	411 aa	Known RBP	0.84	□□□□□ -2.28
NOP9	YJL010C	YDR115W	Q04598	105 aa		0.84	□□□□□ -2.28
NOP9	YJL010C	YHC1	Q05900	231 aa	Known RBP	0.84	□□□□□ -2.28
NOP9	YJL010C	STE7	P06784	515 aa		0.83	□□□□□ -2.28
NOP9	YJL010C	ASP3-2	P0CX77	362 aa		0.83	□□□□□ -2.28
NOP9	YJL010C	ASP3-3	P0CX78	362 aa		0.83	□□□□□ -2.28
NOP9	YJL010C	ASP3-4	P0CX79	362 aa		0.83	□□□□□ -2.28
NOP9	YJL010C	ASP3-1	P0CZ17	362 aa		0.83	□□□□□ -2.28
NOP9	YJL010C	PUT4	P15380	627 aa		0.83	□□□□□ -2.28
NOP9	YJL010C	ZUO1	P32527	433 aa	Known RBP	0.83	□□□□□ -2.28
NOP9	YJL010C	PFF1	P38244	976 aa		0.83	□□□□□ -2.28
NOP9	YJL010C	WSS1	P38838	269 aa		0.83	□□□□□ -2.28
NOP9	YJL010C	MNL1	P38888	796 aa		0.83	□□□□□ -2.28
NOP9	YJL010C	GDI1	P39958	451 aa	Known RBP	0.83	□□□□□ -2.28
NOP9	YJL010C	LCB2	P40970	561 aa		0.83	□□□□□ -2.28
NOP9	YJL010C	ATP22	P50273	684 aa	Predicted RBP	0.83	□□□□□ -2.28
NOP9	YJL010C	MEH1	Q02205	184 aa		0.83	□□□□□ -2.28
NOP9	YJL010C	RPL21A	Q02753	160 aa	Known RBP	0.83	□□□□□ -2.28
NOP9	YJL010C	YDR541C	Q03049	344 aa		0.83	□□□□□ -2.28
NOP9	YJL010C	PRP3	Q03338	469 aa	Predicted RBP	0.83	□□□□□ -2.28
NOP9	YJL010C	URC2	Q04411	772 aa		0.83	□□□□□ -2.28
NOP9	YJL010C	MSC3	Q05812	728 aa		0.83	□□□□□ -2.28
NOP9	YJL010C	LDS2	Q08218	356 aa		0.83	□□□□□ -2.28
NOP9	YJL010C	YDR061W	Q12298	539 aa		0.83	□□□□□ -2.28
NOP9	YJL010C	RPL21B	Q12672	160 aa	Known RBP	0.83	□□□□□ -2.28
NOP9	YJL010C	MEX67	Q99257	599 aa	Known RBP	0.83	□□□□□ -2.28
NOP9	YJL010C	RPS18A	P0CX55	146 aa	Known RBP	0.82	□□□□□ -2.28
NOP9	YJL010C	RPS18B	P0CX56	146 aa	Predicted RBP	0.82	□□□□□ -2.28
NOP9	YJL010C	MNE1	P24720	663 aa		0.82	□□□□□ -2.28
NOP9	YJL010C	ECT1	P33412	323 aa		0.82	□□□□□ -2.28
NOP9	YJL010C	BMT2	P38278	337 aa		0.82	□□□□□ -2.28
NOP9	YJL010C	LSM12	P38828	187 aa	Known RBP	0.82	□□□□□ -2.28
NOP9	YJL010C	PEX22	P39718	180 aa		0.82	□□□□□ -2.28
NOP9	YJL010C	SEC27	P41811	889 aa	Known RBP	0.82	□□□□□ -2.28
NOP9	YJL010C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	0.82	□□□□□ -2.28	not detected
NOP9	YJL010C	ABM1	P47146	123 aa		0.82	□□□□□ -2.28
NOP9	YJL010C	VEL1	P53058	206 aa		0.82	□□□□□ -2.28
NOP9	YJL010C	CWC22	P53333	577 aa	Known RBP	0.82	□□□□□ -2.28
NOP9	YJL010C	RRN9	P53437	365 aa		0.82	□□□□□ -2.28
NOP9	YJL010C	HST1	P53685	503 aa		0.82	□□□□□ -2.28
NOP9	YJL010C	PRP38	Q00723	242 aa	Predicted RBP	0.82	□□□□□ -2.28
NOP9	YJL010C	YLR177W	Q06251	628 aa		0.82	□□□□□ -2.28
NOP9	YJL010C	SPE3	Q12074	293 aa	Known RBP	0.82	□□□□□ -2.28
NOP9	YJL010C	ERP4	Q12450	207 aa		0.82	□□□□□ -2.28
NOP9	YJL010C	PRM7	Q12459	698 aa		0.82	□□□□□ -2.28
NOP9	YJL010C	RAX2	Q12465	1220 aa		0.82	□□□□□ -2.28
NOP9	YJL010C	RPL6B	P05739	176 aa	Known RBP	0.82	□□□□□ -2.28
NOP9	YJL010C	RPS19A	P07280	144 aa	Known RBP	0.82	□□□□□ -2.28
NOP9	YJL010C	RPS19B	P07281	144 aa	Predicted RBP	0.82	□□□□□ -2.28
NOP9	YJL010C	TOA2	P32774	122 aa		0.82	□□□□□ -2.28
NOP9	YJL010C	PDC2	P32896	925 aa		0.82	□□□□□ -2.28
NOP9	YJL010C	YBR241C	P38142	488 aa		0.82	□□□□□ -2.28
NOP9	YJL010C	YBL028C	P38202	106 aa		0.82	□□□□□ -2.28
NOP9	YJL010C	SPP381	P38282	291 aa	Predicted RBP	0.82	□□□□□ -2.28
NOP9	YJL010C	HEM14	P40012	539 aa		0.82	□□□□□ -2.28
NOP9	YJL010C	EFM4	P40516	257 aa		0.82	□□□□□ -2.28
NOP9	YJL010C	EPL1	P43572	832 aa		0.82	□□□□□ -2.28
NOP9	YJL010C	RSC1	P53236	928 aa		0.82	□□□□□ -2.28
NOP9	YJL010C	VHT1	P53241	593 aa		0.82	□□□□□ -2.28
NOP9	YJL010C	RTT102	P53330	157 aa		0.82	□□□□□ -2.28
NOP9	YJL010C	RNH201	P53942	307 aa		0.82	□□□□□ -2.28
NOP9	YJL010C	VPS9	P54787	451 aa		0.82	□□□□□ -2.28
NOP9	YJL010C	RPL6A	Q02326	176 aa	Known RBP	0.82	□□□□□ -2.28
NOP9	YJL010C	FSH2	Q05015	223 aa		0.82	□□□□□ -2.28
NOP9	YJL010C	AAD15	Q08361	143 aa		0.82	□□□□□ -2.28
NOP9	YJL010C	TIR4	Q12218	487 aa	Predicted RBP	0.82	□□□□□ -2.28
NOP9	YJL010C	RPN5	Q12250	445 aa	Known RBP	0.82	□□□□□ -2.28
NOP9	YJL010C	MCT1	Q12283	360 aa		0.82	□□□□□ -2.28
NOP9	YJL010C	PAR32	Q12515	295 aa	Known RBP	0.82	□□□□□ -2.28
NOP9	YJL010C	RPL1A	P0CX43	217 aa	Known RBP	0.81	□□□□□ -2.28
NOP9	YJL010C	RPL1B	P0CX44	217 aa	Known RBP	0.81	□□□□□ -2.28
NOP9	YJL010C	RNA1	P11745	407 aa	Known RBP	0.81	□□□□□ -2.28
NOP9	YJL010C	MAS2	P11914	482 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	EPT1	P22140	391 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	RPL16A	P26784	199 aa	Known RBP	0.81	□□□□□ -2.28
NOP9	YJL010C	ANP1	P32629	500 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	TOA1	P32773	286 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	FMT1	P32785	401 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	MDL1	P33310	695 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	GDT1	P38301	280 aa	Predicted RBP	0.81	□□□□□ -2.28
NOP9	YJL010C	ECM34	P38728	170 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	CHL4	P38907	458 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	PFS2	P42841	465 aa	Known RBP	0.81	□□□□□ -2.28
NOP9	YJL010C	CIN2	P46670	268 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	ASN2	P49090	572 aa	Known RBP	0.81	□□□□□ -2.28
NOP9	YJL010C	BIO3	P50277	480 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	YML6	P51998	286 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	VAC7	P53950	1165 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	NDL1	Q06568	189 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	GAT3	Q07928	141 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	YOR376W	Q08900	122 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	SRO7	Q12038	1033 aa		0.81	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms