RNA–Protein interactions for RNA: YHR148W

IMP3, Transcript of Component of the SSU processome, yeastyeast

Gene IMP3, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IMP3YHR148W MSP1P28737 362 aa3.56□□□□□ -1.84
IMP3YHR148W PSO2P30620 661 aa3.56□□□□□ -1.84
IMP3YHR148W YER186CP40101 306 aa3.56□□□□□ -1.84
IMP3YHR148W YNL208WP40159 199 aaKnown RBP3.56□□□□□ -1.84
IMP3YHR148W DFG10P40526 253 aa3.56□□□□□ -1.84
IMP3YHR148W YHC1Q05900 231 aaKnown RBP3.56□□□□□ -1.84
IMP3YHR148W RPL6BP05739 176 aaKnown RBP3.55□□□□□ -1.84
IMP3YHR148W CHA1P25379 360 aaKnown RBP3.55□□□□□ -1.84
IMP3YHR148W PRS1P32895 427 aaKnown RBP3.55□□□□□ -1.84
IMP3YHR148W SPO23P33757 523 aa3.55□□□□□ -1.84
IMP3YHR148W APE4P38821 490 aa3.55□□□□□ -1.84
IMP3YHR148W SEC27P41811 889 aaKnown RBP3.55□□□□□ -1.84
IMP3YHR148W KEG1P43614 200 aa3.55□□□□□ -1.84
IMP3YHR148W EOS1P53938 366 aa3.55□□□□□ -1.84
IMP3YHR148W RPL6AQ02326 176 aaKnown RBP3.55□□□□□ -1.84
IMP3YHR148W SKI8Q02793 397 aaPredicted RBP3.55□□□□□ -1.84
IMP3YHR148W PCL9Q12477 304 aa3.55□□□□□ -1.84
IMP3YHR148W SFG1Q12507 346 aa3.55□□□□□ -1.84
IMP3YHR148W HTZ1Q12692 134 aaKnown RBP3.55□□□□□ -1.84
IMP3YHR148W TFB5Q3E7C1 72 aaPredicted RBP3.55□□□□□ -1.84
IMP3YHR148W CDC50P25656 391 aa3.54□□□□□ -1.84
IMP3YHR148W FAA1P30624 700 aaKnown RBP3.54□□□□□ -1.84
IMP3YHR148W OM14P38325 134 aa3.54□□□□□ -1.84
IMP3YHR148W TIM17P39515 158 aa3.54□□□□□ -1.84
IMP3YHR148W CTK3P46963 296 aaPredicted RBP3.54□□□□□ -1.84
IMP3YHR148W PGU1P47180 361 aa3.54□□□□□ -1.84
IMP3YHR148W UTP6Q02354 440 aaKnown RBP3.54□□□□□ -1.84
IMP3YHR148W BSC6Q08280 497 aa3.54□□□□□ -1.84
IMP3YHR148W NFI1Q12216 726 aa3.54□□□□□ -1.84
IMP3YHR148W MCT1Q12283 360 aa3.54□□□□□ -1.84
IMP3YHR148W MEX67Q99257 599 aaKnown RBP3.54□□□□□ -1.84
IMP3YHR148W UBA1P22515 1024 aaKnown RBP3.53□□□□□ -1.84
IMP3YHR148W DAD2P36162 133 aa3.53□□□□□ -1.84
IMP3YHR148W PFS1P38872 237 aa3.53□□□□□ -1.84
IMP3YHR148W HEM14P40012 539 aa3.53□□□□□ -1.84
IMP3YHR148W CIN2P46670 268 aa3.53□□□□□ -1.84
IMP3YHR148W RET3P53600 189 aa3.53□□□□□ -1.84
IMP3YHR148W YNR068CP53754 272 aa3.53□□□□□ -1.84
IMP3YHR148W DBR1P24309 405 aaKnown RBP3.52□□□□□ -1.85
IMP3YHR148W REX2P54964 269 aaKnown RBP3.52□□□□□ -1.85
IMP3YHR148W PEX27Q08580 376 aa3.52□□□□□ -1.85
IMP3YHR148W YOR012WQ12351 137 aa3.52□□□□□ -1.85
IMP3YHR148W PRB1P09232 635 aa3.51□□□□□ -1.85
IMP3YHR148W POT1P27796 417 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
IMP3YHR148W SWI3P32591 825 aa3.51□□□□□ -1.85
IMP3YHR148W IES6P32617 166 aa3.51□□□□□ -1.85
IMP3YHR148W BLI1P35727 113 aa3.51□□□□□ -1.85
IMP3YHR148W LAS1P36146 502 aaPredicted RBP3.51□□□□□ -1.85
IMP3YHR148W MRP21P38175 177 aa3.51□□□□□ -1.85
IMP3YHR148W GDT1P38301 280 aaPredicted RBP3.51□□□□□ -1.85
IMP3YHR148W ALD5P40047 520 aaKnown RBP3.51□□□□□ -1.85
IMP3YHR148W LYS12P40495 371 aaKnown RBP3.51□□□□□ -1.85
IMP3YHR148W AIM33Q04516 312 aa3.51□□□□□ -1.85
IMP3YHR148W YOR338WQ99326 363 aa3.51□□□□□ -1.85
IMP3YHR148W COX4P04037 155 aa3.5□□□□□ -1.85
IMP3YHR148W RPS16AP0CX51 143 aaKnown RBP3.5□□□□□ -1.85
IMP3YHR148W RPS16BP0CX52 143 aaKnown RBP3.5□□□□□ -1.85
IMP3YHR148W RPS18AP0CX55 146 aaKnown RBP3.5□□□□□ -1.85
IMP3YHR148W RPS18BP0CX56 146 aaPredicted RBP3.5□□□□□ -1.85
IMP3YHR148W ZRC1P20107 442 aa3.5□□□□□ -1.85
IMP3YHR148W MSK1P32048 576 aa3.5□□□□□ -1.85
IMP3YHR148W TRF5P48561 642 aaKnown RBP3.5□□□□□ -1.85
IMP3YHR148W MRPS16Q02608 121 aa3.5□□□□□ -1.85
IMP3YHR148W YLH47Q06493 454 aa3.5□□□□□ -1.85
IMP3YHR148W DNL4Q08387 944 aaPredicted RBP3.5□□□□□ -1.85
IMP3YHR148W AIM45Q12480 344 aaKnown RBP3.5□□□□□ -1.85
IMP3YHR148W MRPL8P22353 238 aa3.49□□□□□ -1.85
IMP3YHR148W PHO84P25297 587 aaKnown RBP3.49□□□□□ -1.85
IMP3YHR148W VAM7P32912 316 aa3.49□□□□□ -1.85
IMP3YHR148W PTK1P36002 662 aaPredicted RBP3.49□□□□□ -1.85
IMP3YHR148W YBL028CP38202 106 aa3.49□□□□□ -1.85
IMP3YHR148W LCP5P40079 357 aaPredicted RBP3.49□□□□□ -1.85
IMP3YHR148W SHS1Q07657 551 aa3.49□□□□□ -1.85
IMP3YHR148W CCH1P50077 2039 aa3.49□□□□□ -1.85
IMP3YHR148W GIT1P25346 518 aa3.48□□□□□ -1.85
IMP3YHR148W SSE1P32589 693 aaKnown RBP3.48□□□□□ -1.85
IMP3YHR148W ANP1P32629 500 aa3.48□□□□□ -1.85
IMP3YHR148W SIF2P38262 535 aa3.48□□□□□ -1.85
IMP3YHR148W SEC9P40357 651 aa3.48□□□□□ -1.85
IMP3YHR148W SNL1P40548 159 aa3.48□□□□□ -1.85
IMP3YHR148W YNL143CP53908 130 aa3.48□□□□□ -1.85
IMP3YHR148W VAC7P53950 1165 aa3.48□□□□□ -1.85
IMP3YHR148W MSC3Q05812 728 aa3.48□□□□□ -1.85
IMP3YHR148W DBP9Q06218 594 aaKnown RBP3.48□□□□□ -1.85
IMP3YHR148W DET1Q99288 334 aaKnown RBP3.48□□□□□ -1.85
IMP3YHR148W FSH3Q99369 266 aa3.48□□□□□ -1.85
IMP3YHR148W MAS2P11914 482 aa3.47□□□□□ -1.85
IMP3YHR148W FAR1P21268 830 aa3.47□□□□□ -1.85
IMP3YHR148W CMK2P22517 447 aa3.47□□□□□ -1.85
IMP3YHR148W RDS1P25611 832 aa3.47□□□□□ -1.85
IMP3YHR148W VPH1P32563 840 aaKnown RBP3.47□□□□□ -1.85
IMP3YHR148W DED81P38707 554 aaKnown RBP3.47□□□□□ -1.85
IMP3YHR148W LSM12P38828 187 aaKnown RBP3.47□□□□□ -1.85
IMP3YHR148W IGD1P43598 195 aa3.47□□□□□ -1.85
IMP3YHR148W AIP1P46680 615 aaKnown RBP3.47□□□□□ -1.85
IMP3YHR148W MPS2P53159 387 aa3.47□□□□□ -1.85
IMP3YHR148W PRP38Q00723 242 aaPredicted RBP3.47□□□□□ -1.85
IMP3YHR148W ENT5Q03769 411 aaKnown RBP3.47□□□□□ -1.85
IMP3YHR148W FAB1P34756 2278 aa3.46□□□□□ -1.85
IMP3YHR148W GRR1P24814 1151 aa3.46□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms