RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeastyeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX1YGR193C YOR022CQ12204 715 aa3.45□□□□□ -1.86
PDX1YGR193C TPT1Q12272 230 aaKnown RBP3.45□□□□□ -1.86
PDX1YGR193C RRP42Q12277 265 aaPredicted RBP3.45□□□□□ -1.86
PDX1YGR193C YOR214CQ12282 236 aa3.45□□□□□ -1.86
PDX1YGR193C SWM1Q12379 170 aa3.45□□□□□ -1.86
PDX1YGR193C YNL162W-AQ3E7A8 72 aa3.45□□□□□ -1.86
PDX1YGR193C VCX1Q99385 411 aa3.45□□□□□ -1.86
PDX1YGR193C TAF2P23255 1407 aa3.44□□□□□ -1.86
PDX1YGR193C THP2O13539 261 aaKnown RBP3.44□□□□□ -1.86
PDX1YGR193C COX2P00410 251 aa3.44□□□□□ -1.86
PDX1YGR193C TPK2P06245 380 aa3.44□□□□□ -1.86
PDX1YGR193C CDC21P06785 304 aa3.44□□□□□ -1.86
PDX1YGR193C PMR1P13586 950 aa3.44□□□□□ -1.86
PDX1YGR193C YSR3P23501 404 aa3.44□□□□□ -1.86
PDX1YGR193C RNA14P25298 677 aaKnown RBP3.44□□□□□ -1.86
PDX1YGR193C CYS3P31373 394 aaKnown RBP3.44□□□□□ -1.86
PDX1YGR193C DGR2P32330 852 aa3.44□□□□□ -1.86
PDX1YGR193C NDC1P32500 655 aa3.44□□□□□ -1.86
PDX1YGR193C RPC25P35718 212 aa3.44□□□□□ -1.86
PDX1YGR193C CBT1P36038 271 aaPredicted RBP3.44□□□□□ -1.86
PDX1YGR193C CMC1P36064 111 aa3.44□□□□□ -1.86
PDX1YGR193C IML3P38265 245 aa3.44□□□□□ -1.86
PDX1YGR193C PCL5P38794 229 aa3.44□□□□□ -1.86
PDX1YGR193C SET5P38890 526 aaKnown RBP3.44□□□□□ -1.86
PDX1YGR193C HRB1P38922 454 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
PDX1YGR193C SER3P40054 469 aa3.44□□□□□ -1.86
PDX1YGR193C BAP3P41815 604 aa3.44□□□□□ -1.86
PDX1YGR193C GDS1P41913 522 aa3.44□□□□□ -1.86
PDX1YGR193C YJL107CP42947 387 aa3.44□□□□□ -1.86
PDX1YGR193C NBP1P52919 319 aaPredicted RBP3.44□□□□□ -1.86
PDX1YGR193C NBP35P52920 328 aa3.44□□□□□ -1.86
PDX1YGR193C YGL108CP53139 140 aa3.44□□□□□ -1.86
PDX1YGR193C VPS73P53142 486 aaKnown RBP3.44□□□□□ -1.86
PDX1YGR193C YGR017WP53210 297 aa3.44□□□□□ -1.86
PDX1YGR193C TRM112P53738 135 aaPredicted RBP3.44□□□□□ -1.86
PDX1YGR193C ALG11P53954 548 aaKnown RBP3.44□□□□□ -1.86
PDX1YGR193C DID2P69771 204 aa3.44□□□□□ -1.86
PDX1YGR193C ARG5,6Q01217 863 aa3.44□□□□□ -1.86
PDX1YGR193C YKR011CQ02209 353 aa3.44□□□□□ -1.86
PDX1YGR193C RNY1Q02933 434 aaKnown RBP3.44□□□□□ -1.86
PDX1YGR193C NHP10Q03435 203 aa3.44□□□□□ -1.86
PDX1YGR193C YDR179W-AQ03983 463 aa3.44□□□□□ -1.86
PDX1YGR193C RIF2Q06208 395 aa3.44□□□□□ -1.86
PDX1YGR193C MHR1Q06630 226 aa3.44□□□□□ -1.86
PDX1YGR193C YPR078CQ06813 372 aa3.44□□□□□ -1.86
PDX1YGR193C NSE1Q07913 336 aa3.44□□□□□ -1.86
PDX1YGR193C YAP7Q08182 245 aa3.44□□□□□ -1.86
PDX1YGR193C AAD15Q08361 143 aa3.44□□□□□ -1.86
PDX1YGR193C AFT2Q08957 416 aa3.44□□□□□ -1.86
PDX1YGR193C DAP1Q12091 152 aa3.44□□□□□ -1.86
PDX1YGR193C APC9Q12107 265 aa3.44□□□□□ -1.86
PDX1YGR193C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
PDX1YGR193C YOR029WQ12243 111 aa3.44□□□□□ -1.86
PDX1YGR193C COX17Q12287 69 aa3.44□□□□□ -1.86
PDX1YGR193C PAA1Q12447 191 aaKnown RBP3.44□□□□□ -1.86
PDX1YGR193C TRM732Q03496 1420 aa3.44□□□□□ -1.86
PDX1YGR193C SMC4Q12267 1418 aa3.44□□□□□ -1.86
PDX1YGR193C YPT1P01123 206 aaKnown RBP3.43□□□□□ -1.86
PDX1YGR193C HTB1P02293 131 aaKnown RBP3.43□□□□□ -1.86
PDX1YGR193C HTB2P02294 131 aa3.43□□□□□ -1.86
PDX1YGR193C YBR121C-AP0C5L4 52 aa3.43□□□□□ -1.86
PDX1YGR193C SNF3P10870 884 aa3.43□□□□□ -1.86
PDX1YGR193C ZWF1P11412 505 aaKnown RBP3.43□□□□□ -1.86
PDX1YGR193C SEC12P11655 471 aa3.43□□□□□ -1.86
PDX1YGR193C ART10P18634 518 aaKnown RBP3.43□□□□□ -1.86
PDX1YGR193C RIT1P23796 513 aa3.43□□□□□ -1.86
PDX1YGR193C SWI4P25302 1093 aaKnown RBP3.43□□□□□ -1.86
PDX1YGR193C GSY2P27472 705 aa3.43□□□□□ -1.86
PDX1YGR193C LAC1P28496 418 aa3.43□□□□□ -1.86
PDX1YGR193C TFC1P32367 649 aa3.43□□□□□ -1.86
PDX1YGR193C GDA1P32621 518 aa3.43□□□□□ -1.86
PDX1YGR193C ECT1P33412 323 aa3.43□□□□□ -1.86
PDX1YGR193C VPS21P36017 210 aaKnown RBP3.43□□□□□ -1.86
PDX1YGR193C NTR2P36118 322 aaPredicted RBP3.43□□□□□ -1.86
PDX1YGR193C SCO2P38072 301 aa3.43□□□□□ -1.86
PDX1YGR193C MAL33P38157 468 aa3.43□□□□□ -1.86
PDX1YGR193C IMD2P38697 523 aaKnown RBP3.43□□□□□ -1.86
PDX1YGR193C ERG28P40030 148 aa3.43□□□□□ -1.86
PDX1YGR193C GID8P40208 455 aa3.43□□□□□ -1.86
PDX1YGR193C HXT9P40885 567 aa3.43□□□□□ -1.86
PDX1YGR193C MAD2P40958 196 aa3.43□□□□□ -1.86
PDX1YGR193C SER2P42941 309 aa3.43□□□□□ -1.86
PDX1YGR193C YJL118WP47022 219 aa3.43□□□□□ -1.86
PDX1YGR193C YPT11P48559 417 aa3.43□□□□□ -1.86
PDX1YGR193C CSL4P53859 292 aaPredicted RBP3.43□□□□□ -1.86
PDX1YGR193C EFM6P53970 246 aa3.43□□□□□ -1.86
PDX1YGR193C HXT11P54862 567 aa3.43□□□□□ -1.86
PDX1YGR193C AAT1Q01802 451 aa3.43□□□□□ -1.86
PDX1YGR193C MFM1Q02783 413 aa3.43□□□□□ -1.86
PDX1YGR193C CRD1Q07560 283 aa3.43□□□□□ -1.86
PDX1YGR193C AAD4Q07747 329 aa3.43□□□□□ -1.86
PDX1YGR193C YOR365CQ08844 703 aa3.43□□□□□ -1.86
PDX1YGR193C NUS1Q12063 375 aa3.43□□□□□ -1.86
PDX1YGR193C PKH2Q12236 1081 aaKnown RBP3.43□□□□□ -1.86
PDX1YGR193C WTM1Q12363 437 aaKnown RBP3.43□□□□□ -1.86
PDX1YGR193C ICT1Q12385 394 aa3.43□□□□□ -1.86
PDX1YGR193C DCN1Q12395 269 aa3.43□□□□□ -1.86
PDX1YGR193C YLR361C-AQ3E795 98 aa3.43□□□□□ -1.86
PDX1YGR193C YCL012CQ8J0M4 134 aa3.43□□□□□ -1.86
PDX1YGR193C ADE5,7P07244 802 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 65.8 ms