RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W EAR1Q03212 550 aa3.5□□□□□ -1.85
SPT6YGR116W LRS4Q04087 347 aaKnown RBP3.5□□□□□ -1.85
SPT6YGR116W CRR1Q05790 422 aa3.5□□□□□ -1.85
SPT6YGR116W YPR063CQ12160 140 aa3.5□□□□□ -1.85
SPT6YGR116W YLR046CQ12253 270 aa3.5□□□□□ -1.85
SPT6YGR116W RGT2Q12300 763 aa3.5□□□□□ -1.85
SPT6YGR116W YOL114CQ12322 202 aa3.5□□□□□ -1.85
SPT6YGR116W PCL9Q12477 304 aa3.5□□□□□ -1.85
SPT6YGR116W YIL002W-AQ3E7Z5 69 aa3.5□□□□□ -1.85
SPT6YGR116W DFG16Q99234 619 aa3.5□□□□□ -1.85
SPT6YGR116W AI3P03877 415 aa3.5□□□□□ -1.85
SPT6YGR116W ARG80P07249 177 aa3.5□□□□□ -1.85
SPT6YGR116W SSA3P09435 649 aaKnown RBP3.5□□□□□ -1.85
SPT6YGR116W NHP6BP11633 99 aaKnown RBP3.5□□□□□ -1.85
SPT6YGR116W AMD1P15274 810 aaKnown RBP3.5□□□□□ -1.85
SPT6YGR116W GLN3P18494 730 aa3.5□□□□□ -1.85
SPT6YGR116W AFT1P22149 690 aa3.5□□□□□ -1.85
SPT6YGR116W CWH43P25618 953 aa3.5□□□□□ -1.85
SPT6YGR116W MCM10P32354 571 aa3.5□□□□□ -1.85
SPT6YGR116W ACP1P32463 125 aa3.5□□□□□ -1.85
SPT6YGR116W SPO23P33757 523 aa3.5□□□□□ -1.85
SPT6YGR116W ZTA1P38230 334 aaKnown RBP3.5□□□□□ -1.85
SPT6YGR116W LRP1P38801 184 aaKnown RBP3.5□□□□□ -1.85
SPT6YGR116W POG1P40473 351 aa3.5□□□□□ -1.85
SPT6YGR116W CDC1P40986 491 aa3.5□□□□□ -1.85
SPT6YGR116W BFA1P47113 574 aa3.5□□□□□ -1.85
SPT6YGR116W ERV25P54837 211 aaKnown RBP3.5□□□□□ -1.85
SPT6YGR116W YCL001W-AP87012 153 aa3.5□□□□□ -1.85
SPT6YGR116W VBA1Q04301 562 aa3.5□□□□□ -1.85
SPT6YGR116W HRD3Q05787 833 aa3.5□□□□□ -1.85
SPT6YGR116W UTP21Q06078 939 aaPredicted RBP3.5□□□□□ -1.85
SPT6YGR116W QCR7P00128 127 aa3.49□□□□□ -1.85
SPT6YGR116W NAR1P23503 491 aaKnown RBP3.49□□□□□ -1.85
SPT6YGR116W TIM23P32897 222 aa3.49□□□□□ -1.85
SPT6YGR116W LHP1P33399 275 aaKnown RBP3.49□□□□□ -1.85
SPT6YGR116W VPS29P38759 282 aa3.49□□□□□ -1.85
SPT6YGR116W YJL016WP47072 561 aa3.49□□□□□ -1.85
SPT6YGR116W STE24P47154 453 aa3.49□□□□□ -1.85
SPT6YGR116W MRX6P48564 524 aa3.49□□□□□ -1.85
SPT6YGR116W STP1Q00947 519 aa3.49□□□□□ -1.85
SPT6YGR116W ACS1Q01574 713 aa3.49□□□□□ -1.85
SPT6YGR116W PEX25Q02969 394 aa3.49□□□□□ -1.85
SPT6YGR116W RIM13Q03792 727 aa3.49□□□□□ -1.85
SPT6YGR116W SPC19Q03954 165 aa3.49□□□□□ -1.85
SPT6YGR116W SSL1Q04673 461 aaPredicted RBP3.49□□□□□ -1.85
SPT6YGR116W YMR074CQ04773 145 aa3.49□□□□□ -1.85
SPT6YGR116W GAD1Q04792 585 aa3.49□□□□□ -1.85
SPT6YGR116W LYS21Q12122 440 aaKnown RBP3.49□□□□□ -1.85
SPT6YGR116W AIM7Q12156 149 aa3.49□□□□□ -1.85
SPT6YGR116W SRN2Q99176 213 aa3.49□□□□□ -1.85
SPT6YGR116W STE50P25344 346 aa3.49□□□□□ -1.85
SPT6YGR116W YCR102CP25608 368 aa3.49□□□□□ -1.85
SPT6YGR116W AFR1P33304 620 aa3.49□□□□□ -1.85
SPT6YGR116W SKN1P33336 771 aa3.49□□□□□ -1.85
SPT6YGR116W PXA2P34230 853 aa3.49□□□□□ -1.85
SPT6YGR116W YKL151CP36059 337 aa3.49□□□□□ -1.85
SPT6YGR116W ASC1P38011 319 aaKnown RBP3.49□□□□□ -1.85
SPT6YGR116W POL12P38121 705 aaPredicted RBP3.49□□□□□ -1.85
SPT6YGR116W CCZ1P38273 704 aa3.49□□□□□ -1.85
SPT6YGR116W RPS20P38701 121 aaKnown RBP3.49□□□□□ -1.85
SPT6YGR116W LSM4P40070 187 aaKnown RBP3.49□□□□□ -1.85
SPT6YGR116W YJR141WP47172 347 aaPredicted RBP3.49□□□□□ -1.85
SPT6YGR116W SNN1P48232 102 aa3.49□□□□□ -1.85
SPT6YGR116W EXG2P52911 562 aa3.49□□□□□ -1.85
SPT6YGR116W DUS1P53759 423 aaKnown RBP3.49□□□□□ -1.85
SPT6YGR116W IGO1P53897 168 aa3.49□□□□□ -1.85
SPT6YGR116W ARL3Q02804 198 aa3.49□□□□□ -1.85
SPT6YGR116W YPL113CQ02961 396 aa3.49□□□□□ -1.85
SPT6YGR116W TY1A-NL1Q12391 440 aaKnown RBP3.49□□□□□ -1.85
SPT6YGR116W ZRC1P20107 442 aa3.49□□□□□ -1.85
SPT6YGR116W CKS1P20486 150 aaKnown RBP3.49□□□□□ -1.85
SPT6YGR116W IDH1P28834 360 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
SPT6YGR116W TKL2P33315 681 aa3.49□□□□□ -1.85
SPT6YGR116W APM3P38153 483 aa3.49□□□□□ -1.85
SPT6YGR116W LDB7P38210 180 aa3.49□□□□□ -1.85
SPT6YGR116W PRS3P38689 320 aaKnown RBP3.49□□□□□ -1.85
SPT6YGR116W PZF1P39933 429 aa3.49□□□□□ -1.85
SPT6YGR116W PRP24P49960 444 aaKnown RBP3.49□□□□□ -1.85
SPT6YGR116W OKP1P53298 406 aa3.49□□□□□ -1.85
SPT6YGR116W NRK1P53915 240 aa3.49□□□□□ -1.85
SPT6YGR116W OAZ1Q02803 292 aa3.49□□□□□ -1.85
SPT6YGR116W YLR173WQ06247 608 aa3.49□□□□□ -1.85
SPT6YGR116W TRM13Q12383 476 aa3.49□□□□□ -1.85
SPT6YGR116W YLR099W-AQ3E798 87 aa3.49□□□□□ -1.85
SPT6YGR116W HOM3P10869 527 aa3.49□□□□□ -1.85
SPT6YGR116W ZWF1P11412 505 aaKnown RBP3.49□□□□□ -1.85
SPT6YGR116W MER1P16523 270 aa3.49□□□□□ -1.85
SPT6YGR116W APA2P22108 325 aa3.49□□□□□ -1.85
SPT6YGR116W VPS17P32913 551 aa3.49□□□□□ -1.85
SPT6YGR116W APE3P37302 537 aaKnown RBP3.49□□□□□ -1.85
SPT6YGR116W PRS2P38620 318 aaKnown RBP3.49□□□□□ -1.85
SPT6YGR116W URA8P38627 578 aaPredicted RBP3.49□□□□□ -1.85
SPT6YGR116W FET3P38993 636 aa3.49□□□□□ -1.85
SPT6YGR116W CIN1P40987 1014 aa3.49□□□□□ -1.85
SPT6YGR116W IME4P41833 600 aa3.49□□□□□ -1.85
SPT6YGR116W SSU1P41930 458 aa3.49□□□□□ -1.85
SPT6YGR116W MRPL22P53881 309 aa3.49□□□□□ -1.85
SPT6YGR116W GIP3Q03016 1276 aa3.49□□□□□ -1.85
SPT6YGR116W HOF1Q05080 669 aa3.49□□□□□ -1.85
SPT6YGR116W SSK1Q07084 712 aa3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 84.6 ms