RNA–Protein interactions for RNA: YGR080W

TWF1, Transcript of Twinfilin, yeast

Gene TWF1, Length 999 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TWF1	YGR080W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	2.23	□□□□□ -2.05	not detected
TWF1	YGR080W	ECM4	P36156	370 aa		2.23	□□□□□ -2.05
TWF1	YGR080W	ADE17	P38009	592 aa	Known RBP	2.23	□□□□□ -2.05
TWF1	YGR080W	DUG2	P38149	878 aa		2.23	□□□□□ -2.05
TWF1	YGR080W	DBP8	P38719	431 aa		2.23	□□□□□ -2.05
TWF1	YGR080W	STN1	P38960	494 aa		2.23	□□□□□ -2.05
TWF1	YGR080W	ALP1	P38971	573 aa		2.23	□□□□□ -2.05
TWF1	YGR080W	MBB1	P39534	108 aa		2.23	□□□□□ -2.05
TWF1	YGR080W	YRB2	P40517	327 aa		2.23	□□□□□ -2.05
TWF1	YGR080W	PAC11	P40960	533 aa		2.23	□□□□□ -2.05
TWF1	YGR080W	CDC40	P40968	455 aa	Predicted RBP	2.23	□□□□□ -2.05
TWF1	YGR080W	BNA6	P43619	295 aa		2.23	□□□□□ -2.05
TWF1	YGR080W	TOS3	P43637	560 aa		2.23	□□□□□ -2.05
TWF1	YGR080W	ERG26	P53199	349 aa	Known RBP	2.23	□□□□□ -2.05
TWF1	YGR080W	YNL260C	P53846	198 aa		2.23	□□□□□ -2.05
TWF1	YGR080W	SLG1	P54867	378 aa		2.23	□□□□□ -2.05
TWF1	YGR080W	PNG1	Q02890	363 aa		2.23	□□□□□ -2.05
TWF1	YGR080W	RSN1	Q03516	953 aa		2.23	□□□□□ -2.05
TWF1	YGR080W	YMR310C	Q04867	317 aa	Predicted RBP	2.23	□□□□□ -2.05
TWF1	YGR080W	ECM30	Q06673	1274 aa		2.23	□□□□□ -2.05
TWF1	YGR080W	DIB1	Q06819	143 aa	Predicted RBP	2.23	□□□□□ -2.05
TWF1	YGR080W	NSE1	Q07913	336 aa		2.23	□□□□□ -2.05
TWF1	YGR080W	YOL159C	Q08300	171 aa		2.23	□□□□□ -2.05
TWF1	YGR080W	RDR1	Q08904	546 aa		2.23	□□□□□ -2.05
TWF1	YGR080W	LSP1	Q12230	341 aa	Known RBP	2.23	□□□□□ -2.05
TWF1	YGR080W	RUP1	Q12242	671 aa		2.23	□□□□□ -2.05
TWF1	YGR080W	YOR012W	Q12351	137 aa		2.23	□□□□□ -2.05
TWF1	YGR080W	FMP16	Q12497	93 aa		2.23	□□□□□ -2.05
TWF1	YGR080W	ROM2	P51862	1356 aa	Known RBP	2.23	□□□□□ -2.05
TWF1	YGR080W	ADE4	P04046	510 aa	Known RBP	2.22	□□□□□ -2.05
TWF1	YGR080W	CDC36	P06100	191 aa	Predicted RBP	2.22	□□□□□ -2.05
TWF1	YGR080W	CDC21	P06785	304 aa		2.22	□□□□□ -2.05
TWF1	YGR080W	NFT1	P0CE68	1218 aa		2.22	□□□□□ -2.05
TWF1	YGR080W	MRP2	P10663	115 aa	Predicted RBP	2.22	□□□□□ -2.05
TWF1	YGR080W	KRS1	P15180	591 aa	Known RBP	2.22	□□□□□ -2.05
TWF1	YGR080W	DAL2	P25335	343 aa		2.22	□□□□□ -2.05
TWF1	YGR080W	RVS161	P25343	265 aa	Known RBP	2.22	□□□□□ -2.05
TWF1	YGR080W	YPS1	P32329	569 aa		2.22	□□□□□ -2.05
TWF1	YGR080W	RME1	P32338	300 aa	Known RBP	2.22	□□□□□ -2.05
TWF1	YGR080W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	2.22	□□□□□ -2.05	not detected
TWF1	YGR080W	FRE1	P32791	686 aa		2.22	□□□□□ -2.05
TWF1	YGR080W	YSC83	P32792	385 aa		2.22	□□□□□ -2.05
TWF1	YGR080W	BUD2	P33314	1104 aa		2.22	□□□□□ -2.05
TWF1	YGR080W	ECT1	P33412	323 aa		2.22	□□□□□ -2.05
TWF1	YGR080W	RPC25	P35718	212 aa		2.22	□□□□□ -2.05
TWF1	YGR080W	YKL023W	P36103	277 aa	Known RBP	2.22	□□□□□ -2.05
TWF1	YGR080W	RRN10	P38204	145 aa		2.22	□□□□□ -2.05
TWF1	YGR080W	QDR3	P38227	689 aa		2.22	□□□□□ -2.05
TWF1	YGR080W	SPP381	P38282	291 aa	Predicted RBP	2.22	□□□□□ -2.05
TWF1	YGR080W	YHR122W	P38829	231 aa		2.22	□□□□□ -2.05
TWF1	YGR080W	PCF11	P39081	626 aa	Predicted RBP	2.22	□□□□□ -2.05
TWF1	YGR080W	PRP39	P39682	629 aa	Known RBP	2.22	□□□□□ -2.05
TWF1	YGR080W	GAT2	P40209	560 aa		2.22	□□□□□ -2.05
TWF1	YGR080W	BIO3	P50277	480 aa		2.22	□□□□□ -2.05
TWF1	YGR080W	KTR5	P53966	522 aa	Predicted RBP	2.22	□□□□□ -2.05
TWF1	YGR080W	REX2	P54964	269 aa	Known RBP	2.22	□□□□□ -2.05
TWF1	YGR080W	YMR178W	Q03219	274 aa	Known RBP	2.22	□□□□□ -2.05
TWF1	YGR080W	EMI2	Q04409	500 aa	Known RBP	2.22	□□□□□ -2.05
TWF1	YGR080W	MDM30	Q05930	598 aa		2.22	□□□□□ -2.05
TWF1	YGR080W	MRPL35	Q06678	367 aa		2.22	□□□□□ -2.05
TWF1	YGR080W	PEX27	Q08580	376 aa		2.22	□□□□□ -2.05
TWF1	YGR080W	APC2	Q12440	853 aa		2.22	□□□□□ -2.05
TWF1	YGR080W	SPO24	Q3E752	67 aa		2.22	□□□□□ -2.05
TWF1	YGR080W	KRE5	P22023	1365 aa		2.22	□□□□□ -2.05
TWF1	YGR080W	MHP1	P43638	1398 aa		2.22	□□□□□ -2.05
TWF1	YGR080W	FAB1	P34756	2278 aa		2.21	□□□□□ -2.06
TWF1	YGR080W	RAD9	P14737	1309 aa		2.21	□□□□□ -2.06
TWF1	YGR080W	IKI3	Q06706	1349 aa	Known RBP	2.21	□□□□□ -2.06
TWF1	YGR080W	PEP4	P07267	405 aa	Known RBP	2.21	□□□□□ -2.06
TWF1	YGR080W	MSF1	P08425	469 aa		2.21	□□□□□ -2.06
TWF1	YGR080W	SEC63	P14906	663 aa		2.21	□□□□□ -2.06
TWF1	YGR080W	ATP10	P18496	279 aa		2.21	□□□□□ -2.06
TWF1	YGR080W	DAL81	P21657	970 aa		2.21	□□□□□ -2.06
TWF1	YGR080W	YCR016W	P25617	290 aa	Known RBP	2.21	□□□□□ -2.06
TWF1	YGR080W	ICL1	P28240	557 aa	Predicted RBP	2.21	□□□□□ -2.06
TWF1	YGR080W	RAD23	P32628	398 aa	Known RBP	2.21	□□□□□ -2.06
TWF1	YGR080W	REC114	P32841	428 aa		2.21	□□□□□ -2.06
TWF1	YGR080W	CYM1	P32898	989 aa		2.21	□□□□□ -2.06
TWF1	YGR080W	IMP3	P32899	183 aa	Predicted RBP	2.21	□□□□□ -2.06
TWF1	YGR080W	SHP1	P34223	423 aa		2.21	□□□□□ -2.06
TWF1	YGR080W	MTR2	P34232	184 aa	Known RBP	2.21	□□□□□ -2.06
TWF1	YGR080W	SPT10	P35208	640 aa		2.21	□□□□□ -2.06
TWF1	YGR080W	YKL071W	P36086	256 aa		2.21	□□□□□ -2.06
TWF1	YGR080W	STV1	P37296	890 aa		2.21	□□□□□ -2.06
TWF1	YGR080W	IML3	P38265	245 aa		2.21	□□□□□ -2.06
TWF1	YGR080W	INM1	P38710	295 aa		2.21	□□□□□ -2.06
TWF1	YGR080W	PRE5	P40302	234 aa	Known RBP	2.21	□□□□□ -2.06
TWF1	YGR080W	UTP18	P40362	594 aa	Predicted RBP	2.21	□□□□□ -2.06
TWF1	YGR080W	TFG2	P41896	400 aa	Predicted RBP	2.21	□□□□□ -2.06
TWF1	YGR080W	RPS10B	P46784	105 aa	Known RBP	2.21	□□□□□ -2.06
TWF1	YGR080W	DSL1	P53847	754 aa		2.21	□□□□□ -2.06
TWF1	YGR080W	YNL247W	P53852	767 aa	Known RBP	2.21	□□□□□ -2.06
TWF1	YGR080W	RSM23	Q01163	450 aa		2.21	□□□□□ -2.06
TWF1	YGR080W	SHR3	Q02774	210 aa		2.21	□□□□□ -2.06
TWF1	YGR080W	CTL1	Q03220	320 aa	Known RBP	2.21	□□□□□ -2.06
TWF1	YGR080W	TAF12	Q03761	539 aa		2.21	□□□□□ -2.06
TWF1	YGR080W	BNA7	Q04066	261 aa		2.21	□□□□□ -2.06
TWF1	YGR080W	SYO1	Q07395	620 aa		2.21	□□□□□ -2.06
TWF1	YGR080W	SHS1	Q07657	551 aa		2.21	□□□□□ -2.06
TWF1	YGR080W	AAD15	Q08361	143 aa		2.21	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 51.1 ms