RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	AFI1	Q99222	893 aa		5.18	□□□□□ -1.58
VTC2	YFL004W	HRP1	Q99383	534 aa	Known RBP	5.18	□□□□□ -1.58
VTC2	YFL004W	GSC2	P40989	1895 aa		5.18	□□□□□ -1.58
VTC2	YFL004W	NHP6B	P11633	99 aa	Known RBP	5.18	□□□□□ -1.58
VTC2	YFL004W	PER1	P25625	357 aa		5.18	□□□□□ -1.58
VTC2	YFL004W	GAC1	P28006	793 aa		5.18	□□□□□ -1.58
VTC2	YFL004W	YIM1	P28625	365 aa		5.18	□□□□□ -1.58
VTC2	YFL004W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
VTC2	YFL004W	HOM6	P31116	359 aa	Known RBP	5.18	□□□□□ -1.58
VTC2	YFL004W	FUN26	P31381	517 aa		5.18	□□□□□ -1.58
VTC2	YFL004W	ORC2	P32833	620 aa		5.18	□□□□□ -1.58
VTC2	YFL004W	LIP5	P32875	414 aa		5.18	□□□□□ -1.58
VTC2	YFL004W	SCD5	P34758	872 aa		5.18	□□□□□ -1.58
VTC2	YFL004W	YKR075C	P36155	307 aa		5.18	□□□□□ -1.58
VTC2	YFL004W	BUR6	P40096	142 aa		5.18	□□□□□ -1.58
VTC2	YFL004W	RPL10	P41805	221 aa	Known RBP	5.18	□□□□□ -1.58
VTC2	YFL004W	BIT61	P47041	543 aa		5.18	□□□□□ -1.58
VTC2	YFL004W	SWF1	Q04629	336 aa		5.18	□□□□□ -1.58
VTC2	YFL004W	RIF2	Q06208	395 aa		5.18	□□□□□ -1.58
VTC2	YFL004W	CRD1	Q07560	283 aa		5.18	□□□□□ -1.58
VTC2	YFL004W	SPC3	Q12133	184 aa		5.18	□□□□□ -1.58
VTC2	YFL004W	Q0142	Q9ZZW4	58 aa		5.18	□□□□□ -1.58
VTC2	YFL004W	REV1	P12689	985 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	EMP24	P32803	203 aa	Known RBP	5.17	□□□□□ -1.58
VTC2	YFL004W	AIM26	P32858	118 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	SSS1	P35179	80 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	ELF1	P36053	145 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	SRP68	P38687	599 aa	Known RBP	5.17	□□□□□ -1.58
VTC2	YFL004W	AIM46	P38885	310 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	LSM5	P40089	93 aa	Known RBP	5.17	□□□□□ -1.58
VTC2	YFL004W	RRG9	P40156	214 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	FAF1	P40546	346 aa	Predicted RBP	5.17	□□□□□ -1.58
VTC2	YFL004W	COX16	P47081	118 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	YGL159W	P53110	370 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	SWC4	P53201	476 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	YGR283C	P53336	341 aa	Predicted RBP	5.17	□□□□□ -1.58
VTC2	YFL004W	IBD2	P53892	351 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	PLB2	Q03674	706 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	EMI1	Q04406	187 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	SMA2	Q04658	369 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	GAD1	Q04792	585 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	SWC7	Q06707	132 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	GPB1	Q08886	897 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	SFM1	Q12314	213 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	SFG1	Q12507	346 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	ECM29	P38737	1868 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	YEL009C-A	A0A023PZF2	135 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	HEM2	P05373	342 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	SNF6	P18888	332 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	PRP2	P20095	876 aa	Predicted RBP	5.17	□□□□□ -1.58
VTC2	YFL004W	AAT2	P23542	418 aa	Known RBP	5.17	□□□□□ -1.58
VTC2	YFL004W	RNA14	P25298	677 aa	Known RBP	5.17	□□□□□ -1.58
VTC2	YFL004W	YCL002C	P25565	263 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	SFC1	P33303	322 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	YNK1	P36010	153 aa	Known RBP	5.17	□□□□□ -1.58
VTC2	YFL004W	YPT52	P36018	234 aa	Known RBP	5.17	□□□□□ -1.58
VTC2	YFL004W	YKL151C	P36059	337 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	ALY1	P36117	915 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	YMC2	P38087	329 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	POP7	P38291	140 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	PEX32	P38292	413 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	NOP16	P40007	231 aa	Known RBP	5.17	□□□□□ -1.58
VTC2	YFL004W	ATM1	P40416	690 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	NET1	P47035	1189 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	TAD2	P47058	250 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	LYS20	P48570	428 aa	Known RBP	5.17	□□□□□ -1.58
VTC2	YFL004W	YGL039W	P53183	348 aa	Known RBP	5.17	□□□□□ -1.58
VTC2	YFL004W	VPS62	P53285	467 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	RTT102	P53330	157 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	SRP1	Q02821	542 aa	Known RBP	5.17	□□□□□ -1.58
VTC2	YFL004W	LRS4	Q04087	347 aa	Known RBP	5.17	□□□□□ -1.58
VTC2	YFL004W	CAC2	Q04199	468 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	YLR046C	Q12253	270 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	PSF1	Q12488	208 aa		5.17	□□□□□ -1.58
VTC2	YFL004W	MET2	P08465	486 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	SSA3	P09435	649 aa	Known RBP	5.16	□□□□□ -1.58
VTC2	YFL004W	DCC1	P25559	380 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	CDC50	P25656	391 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	GPT2	P36148	743 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	ALG14	P38242	237 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	MMS4	P38257	691 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	SFB3	P38810	929 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	MDM31	P38880	579 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	AYR1	P40471	297 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	YIR007W	P40566	764 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	IRC7	P43623	340 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	RGT2	Q12300	763 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	EAF3	Q12432	401 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	HBN1	Q96VH4	193 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	SCEI	P03882	235 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	LEU4	P06208	619 aa	Known RBP	5.16	□□□□□ -1.58
VTC2	YFL004W	CBP1	P07252	654 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	NAR1	P23503	491 aa	Known RBP	5.16	□□□□□ -1.58
VTC2	YFL004W	YCR061W	P25639	631 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	BUB3	P26449	341 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	CYS3	P31373	394 aa	Known RBP	5.16	□□□□□ -1.58
VTC2	YFL004W	TSL1	P38427	1098 aa	Known RBP	5.16	□□□□□ -1.58
VTC2	YFL004W	YEL025C	P39991	1188 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	FKH2	P41813	862 aa		5.16	□□□□□ -1.58
VTC2	YFL004W	PMT4	P46971	762 aa		5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms