RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	GCN20	P43535	752 aa	Known RBP	5.99	□□□□□ -1.45
VMA3	YEL027W	ALB1	P47019	175 aa	Predicted RBP	5.99	□□□□□ -1.45
VMA3	YEL027W	BIT61	P47041	543 aa		5.99	□□□□□ -1.45
VMA3	YEL027W	UBX6	P47049	396 aa		5.99	□□□□□ -1.45
VMA3	YEL027W	APS3	P47064	194 aa		5.99	□□□□□ -1.45
VMA3	YEL027W	NAT4	Q04751	285 aa		5.99	□□□□□ -1.45
VMA3	YEL027W	YPR097W	Q06839	1073 aa		5.99	□□□□□ -1.45
VMA3	YEL027W	DTD1	Q07648	150 aa	Known RBP	5.99	□□□□□ -1.45
VMA3	YEL027W	LOT6	Q07923	191 aa		5.99	□□□□□ -1.45
VMA3	YEL027W	REX3	Q12090	404 aa		5.99	□□□□□ -1.45
VMA3	YEL027W	RPL7B	Q12213	244 aa	Known RBP	5.99	□□□□□ -1.45
VMA3	YEL027W	RIB3	Q99258	208 aa		5.99	□□□□□ -1.45
VMA3	YEL027W	RPP2B	P02400	110 aa	Known RBP	5.98	□□□□□ -1.45
VMA3	YEL027W	CDC9	P04819	755 aa		5.98	□□□□□ -1.45
VMA3	YEL027W	PET9	P18239	318 aa	Known RBP	5.98	□□□□□ -1.45
VMA3	YEL027W	YCR102C	P25608	368 aa		5.98	□□□□□ -1.45
VMA3	YEL027W	RPN2	P32565	945 aa	Known RBP	5.98	□□□□□ -1.45
VMA3	YEL027W	PEP12	P32854	288 aa		5.98	□□□□□ -1.45
VMA3	YEL027W	RCY1	P39531	840 aa		5.98	□□□□□ -1.45
VMA3	YEL027W	BNA3	P47039	444 aa	Known RBP	5.98	□□□□□ -1.45
VMA3	YEL027W	SPT20	P50875	604 aa		5.98	□□□□□ -1.45
VMA3	YEL027W	OCA1	P50946	238 aa	Predicted RBP	5.98	□□□□□ -1.45
VMA3	YEL027W	VPS73	P53142	486 aa	Known RBP	5.98	□□□□□ -1.45
VMA3	YEL027W	MTQ1	P53944	314 aa		5.98	□□□□□ -1.45
VMA3	YEL027W	NUP53	Q03790	475 aa		5.98	□□□□□ -1.45
VMA3	YEL027W	SWA2	Q06677	668 aa		5.98	□□□□□ -1.45
VMA3	YEL027W	RPS21B	Q3E754	87 aa	Known RBP	5.98	□□□□□ -1.45
VMA3	YEL027W	RPL43A	P0CX25	92 aa	Known RBP	5.97	□□□□□ -1.45
VMA3	YEL027W	RPL43B	P0CX26	92 aa		5.97	□□□□□ -1.45
VMA3	YEL027W	FAR1	P21268	830 aa		5.97	□□□□□ -1.45
VMA3	YEL027W	MCK1	P21965	375 aa	Known RBP	5.97	□□□□□ -1.45
VMA3	YEL027W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	5.97	□□□□□ -1.45	not detected
VMA3	YEL027W	TOD6	P34219	525 aa		5.97	□□□□□ -1.45
VMA3	YEL027W	YAR028W	P39548	234 aa		5.97	□□□□□ -1.45
VMA3	YEL027W	GID8	P40208	455 aa		5.97	□□□□□ -1.45
VMA3	YEL027W	BAP3	P41815	604 aa		5.97	□□□□□ -1.45
VMA3	YEL027W	YFL066C	P43538	392 aa		5.97	□□□□□ -1.45
VMA3	YEL027W	CAK1	P43568	368 aa	Predicted RBP	5.97	□□□□□ -1.45
VMA3	YEL027W	MPC1	P53157	130 aa	Known RBP	5.97	□□□□□ -1.45
VMA3	YEL027W	TPC1	P53257	314 aa		5.97	□□□□□ -1.45
VMA3	YEL027W	CTL1	Q03220	320 aa	Known RBP	5.97	□□□□□ -1.45
VMA3	YEL027W	YMR210W	Q03649	449 aa		5.97	□□□□□ -1.45
VMA3	YEL027W	RNH202	Q05635	350 aa		5.97	□□□□□ -1.45
VMA3	YEL027W	RHO1	P06780	209 aa	Known RBP	5.96	□□□□□ -1.46
VMA3	YEL027W	RPL20A	P0CX23	172 aa	Known RBP	5.96	□□□□□ -1.46
VMA3	YEL027W	RPL20B	P0CX24	172 aa	Predicted RBP	5.96	□□□□□ -1.46
VMA3	YEL027W	KSS1	P14681	368 aa		5.96	□□□□□ -1.46
VMA3	YEL027W	GPI12	P23797	304 aa		5.96	□□□□□ -1.46
VMA3	YEL027W	RRP7	P25368	297 aa	Predicted RBP	5.96	□□□□□ -1.46
VMA3	YEL027W	ADH7	P25377	361 aa		5.96	□□□□□ -1.46
VMA3	YEL027W	PBN1	P25580	416 aa		5.96	□□□□□ -1.46
VMA3	YEL027W	STP22	P25604	385 aa		5.96	□□□□□ -1.46
VMA3	YEL027W	SAC1	P32368	623 aa	Known RBP	5.96	□□□□□ -1.46
VMA3	YEL027W	ASF2	P32448	525 aa	Predicted RBP	5.96	□□□□□ -1.46
VMA3	YEL027W	GSH1	P32477	678 aa		5.96	□□□□□ -1.46
VMA3	YEL027W	SPC42	P36094	363 aa		5.96	□□□□□ -1.46
VMA3	YEL027W	PZF1	P39933	429 aa		5.96	□□□□□ -1.46
VMA3	YEL027W	SPO73	P40031	143 aa		5.96	□□□□□ -1.46
VMA3	YEL027W	PDS1	P40316	373 aa	Predicted RBP	5.96	□□□□□ -1.46
VMA3	YEL027W	YRB2	P40517	327 aa		5.96	□□□□□ -1.46
VMA3	YEL027W	NUP57	P48837	541 aa		5.96	□□□□□ -1.46
VMA3	YEL027W	PRM8	P53174	237 aa		5.96	□□□□□ -1.46
VMA3	YEL027W	TPS1	Q00764	495 aa	Known RBP	5.96	□□□□□ -1.46
VMA3	YEL027W	SWP1	Q02795	286 aa		5.96	□□□□□ -1.46
VMA3	YEL027W	URC2	Q04411	772 aa		5.96	□□□□□ -1.46
VMA3	YEL027W	VPS36	Q06696	566 aa		5.96	□□□□□ -1.46
VMA3	YEL027W	YOR214C	Q12282	236 aa		5.96	□□□□□ -1.46
VMA3	YEL027W	MMP1	Q12372	583 aa		5.96	□□□□□ -1.46
VMA3	YEL027W	PAR32	Q12515	295 aa	Known RBP	5.96	□□□□□ -1.46
VMA3	YEL027W	MOD5	P07884	428 aa		5.95	□□□□□ -1.46
VMA3	YEL027W	YOL163W	P0CF20	169 aa		5.95	□□□□□ -1.46
VMA3	YEL027W	PTP2	P29461	750 aa		5.95	□□□□□ -1.46
VMA3	YEL027W	VPH2	P32341	215 aa		5.95	□□□□□ -1.46
VMA3	YEL027W	CYS4	P32582	507 aa	Known RBP	5.95	□□□□□ -1.46
VMA3	YEL027W	SSE2	P32590	693 aa	Known RBP	5.95	□□□□□ -1.46
VMA3	YEL027W	BCK2	P33306	851 aa		5.95	□□□□□ -1.46
VMA3	YEL027W	SRL3	P36167	246 aa		5.95	□□□□□ -1.46
VMA3	YEL027W	YBR139W	P38109	508 aa		5.95	□□□□□ -1.46
VMA3	YEL027W	ALG3	P38179	458 aa		5.95	□□□□□ -1.46
VMA3	YEL027W	MOH1	P38191	138 aa		5.95	□□□□□ -1.46
VMA3	YEL027W	ANS1	P38832	159 aa		5.95	□□□□□ -1.46
VMA3	YEL027W	COG3	P40094	801 aa		5.95	□□□□□ -1.46
VMA3	YEL027W	SMK1	P41808	388 aa		5.95	□□□□□ -1.46
VMA3	YEL027W	MDV1	P47025	714 aa		5.95	□□□□□ -1.46
VMA3	YEL027W	YJR141W	P47172	347 aa	Predicted RBP	5.95	□□□□□ -1.46
VMA3	YEL027W	YGR067C	P53243	804 aa		5.95	□□□□□ -1.46
VMA3	YEL027W	DAM1	P53267	343 aa		5.95	□□□□□ -1.46
VMA3	YEL027W	YGR168C	P53293	376 aa		5.95	□□□□□ -1.46
VMA3	YEL027W	DCP2	P53550	970 aa	Known RBP	5.95	□□□□□ -1.46
VMA3	YEL027W	DBP6	P53734	629 aa	Known RBP	5.95	□□□□□ -1.46
VMA3	YEL027W	ASI1	P54074	624 aa		5.95	□□□□□ -1.46
VMA3	YEL027W	SRP1	Q02821	542 aa	Known RBP	5.95	□□□□□ -1.46
VMA3	YEL027W	YOR376W	Q08900	122 aa		5.95	□□□□□ -1.46
VMA3	YEL027W	NFI1	Q12216	726 aa		5.95	□□□□□ -1.46
VMA3	YEL027W	YLR126C	Q12288	251 aa		5.95	□□□□□ -1.46
VMA3	YEL027W	PSF1	Q12488	208 aa		5.95	□□□□□ -1.46
VMA3	YEL027W	AI1	P03875	834 aa		5.94	□□□□□ -1.46
VMA3	YEL027W	YSF3	P0C074	85 aa	Predicted RBP	5.94	□□□□□ -1.46
VMA3	YEL027W	BAR1	P12630	587 aa		5.94	□□□□□ -1.46
VMA3	YEL027W	YCK1	P23291	538 aa		5.94	□□□□□ -1.46

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms