RNA–Protein interactions for RNA: YDR194C

MSS116, Transcript of Mitochondrial transcription elongation factor, yeastyeast

Gene MSS116, Length 1,995 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSS116YDR194C SIP3P38717 1229 aa5.37□□□□□ -1.55
MSS116YDR194C FAA2P39518 744 aa5.37□□□□□ -1.55
MSS116YDR194C VPS52P39904 641 aa5.37□□□□□ -1.55
MSS116YDR194C BIO4P53630 237 aa5.37□□□□□ -1.55
MSS116YDR194C ATP23P53722 227 aa5.37□□□□□ -1.55
MSS116YDR194C YOP1Q12402 180 aa5.37□□□□□ -1.55
MSS116YDR194C YAR066WP0CX18 203 aa5.36□□□□□ -1.55
MSS116YDR194C YHR214WP0CX19 203 aa5.36□□□□□ -1.55
MSS116YDR194C ASF2P32448 525 aaPredicted RBP5.36□□□□□ -1.55
MSS116YDR194C SKG6P32900 734 aaPredicted RBP5.36□□□□□ -1.55
MSS116YDR194C MNS1P32906 549 aa5.36□□□□□ -1.55
MSS116YDR194C YPK3P38070 525 aa5.36□□□□□ -1.55
MSS116YDR194C CCT4P39078 528 aaKnown RBP5.36□□□□□ -1.55
MSS116YDR194C SEC9P40357 651 aa5.36□□□□□ -1.55
MSS116YDR194C ABM1P47146 123 aa5.36□□□□□ -1.55
MSS116YDR194C YGR117CP53270 476 aa5.36□□□□□ -1.55
MSS116YDR194C ARK1P53974 638 aa5.36□□□□□ -1.55
MSS116YDR194C MRPL51Q06090 140 aaPredicted RBP5.36□□□□□ -1.55
MSS116YDR194C SIA1Q12212 622 aa5.36□□□□□ -1.55
MSS116YDR194C CDC36P06100 191 aaPredicted RBP5.36□□□□□ -1.55
MSS116YDR194C SPO11P23179 398 aa5.36□□□□□ -1.55
MSS116YDR194C URE2P23202 354 aaKnown RBP5.36□□□□□ -1.55
MSS116YDR194C YCR016WP25617 290 aaKnown RBP5.36□□□□□ -1.55
MSS116YDR194C DHH1P39517 506 aaKnown RBP5.36□□□□□ -1.55
MSS116YDR194C KAP114P53067 1004 aa5.36□□□□□ -1.55
MSS116YDR194C IRC15Q02733 499 aa5.36□□□□□ -1.55
MSS116YDR194C NCA2Q12374 616 aa5.36□□□□□ -1.55
MSS116YDR194C SSK22P25390 1331 aaPredicted RBP5.35□□□□□ -1.55
MSS116YDR194C RAD7P06779 565 aa5.35□□□□□ -1.55
MSS116YDR194C RVS161P25343 265 aaKnown RBP5.35□□□□□ -1.55
MSS116YDR194C PRO3P32263 286 aaKnown RBP5.35□□□□□ -1.55
MSS116YDR194C KRE6P32486 720 aa5.35□□□□□ -1.55
MSS116YDR194C LOS1P33418 1100 aaPredicted RBP5.35□□□□□ -1.55
MSS116YDR194C OAR1P35731 278 aa5.35□□□□□ -1.55
MSS116YDR194C IST2P38250 946 aa5.35□□□□□ -1.55
MSS116YDR194C HIS2P38635 335 aa5.35□□□□□ -1.55
MSS116YDR194C SSN8P47821 323 aa5.35□□□□□ -1.55
MSS116YDR194C YPT11P48559 417 aa5.35□□□□□ -1.55
MSS116YDR194C TAF6P53040 516 aa5.35□□□□□ -1.55
MSS116YDR194C KTR6P54070 446 aa5.35□□□□□ -1.55
MSS116YDR194C MRPS17Q03246 237 aaPredicted RBP5.35□□□□□ -1.55
MSS116YDR194C IZH1Q03419 316 aa5.35□□□□□ -1.55
MSS116YDR194C YDL009CQ12210 107 aa5.35□□□□□ -1.55
MSS116YDR194C TEF1P02994 458 aaKnown RBP5.35□□□□□ -1.55
MSS116YDR194C ARF2P19146 181 aaKnown RBP5.35□□□□□ -1.55
MSS116YDR194C MRPL8P22353 238 aa5.35□□□□□ -1.55
MSS116YDR194C TIP1P27654 210 aaPredicted RBP5.35□□□□□ -1.55
MSS116YDR194C RSM22P36056 628 aa5.35□□□□□ -1.55
MSS116YDR194C SPR6Q01684 191 aa5.35□□□□□ -1.55
MSS116YDR194C ODC1Q03028 310 aa5.35□□□□□ -1.55
MSS116YDR194C DIB1Q06819 143 aaPredicted RBP5.35□□□□□ -1.55
MSS116YDR194C SAM4Q08985 325 aaKnown RBP5.35□□□□□ -1.55
MSS116YDR194C GCG1P32656 232 aaKnown RBP5.34□□□□□ -1.55
MSS116YDR194C MGM101P32787 269 aaKnown RBP5.34□□□□□ -1.55
MSS116YDR194C CYM1P32898 989 aa5.34□□□□□ -1.55
MSS116YDR194C MMS21P38632 267 aa5.34□□□□□ -1.55
MSS116YDR194C SLM1P40485 686 aa5.34□□□□□ -1.55
MSS116YDR194C LST7P53237 242 aa5.34□□□□□ -1.55
MSS116YDR194C SLI1P53304 468 aa5.34□□□□□ -1.55
MSS116YDR194C GTO3Q04806 366 aa5.34□□□□□ -1.55
MSS116YDR194C SSQ1Q05931 657 aaPredicted RBP5.34□□□□□ -1.55
MSS116YDR194C MDM36Q06820 579 aa5.34□□□□□ -1.55
MSS116YDR194C TSR1Q07381 788 aaKnown RBP5.34□□□□□ -1.55
MSS116YDR194C YAP7Q08182 245 aa5.34□□□□□ -1.55
MSS116YDR194C YOR029WQ12243 111 aa5.34□□□□□ -1.55
MSS116YDR194C ADH2P00331 348 aaKnown RBP5.33□□□□□ -1.56
MSS116YDR194C RAD3P06839 778 aa5.33□□□□□ -1.56
MSS116YDR194C MCR1P36060 302 aaKnown RBP5.33□□□□□ -1.56
MSS116YDR194C GUF1P46943 645 aa5.33□□□□□ -1.56
MSS116YDR194C COX16P47081 118 aa5.33□□□□□ -1.56
MSS116YDR194C PXR1P53335 271 aaPredicted RBP5.33□□□□□ -1.56
MSS116YDR194C MKC7P53379 596 aa5.33□□□□□ -1.56
MSS116YDR194C YNL181WP53878 407 aa5.33□□□□□ -1.56
MSS116YDR194C HXT11P54862 567 aa5.33□□□□□ -1.56
MSS116YDR194C GMC2Q06201 188 aa5.33□□□□□ -1.56
MSS116YDR194C SSC1P0CS90 654 aaKnown RBP5.33□□□□□ -1.56
MSS116YDR194C TMT1P32643 299 aa5.33□□□□□ -1.56
MSS116YDR194C YNK1P36010 153 aaKnown RBP5.33□□□□□ -1.56
MSS116YDR194C UBP5P39944 805 aa5.33□□□□□ -1.56
MSS116YDR194C MRX5P47007 382 aa5.33□□□□□ -1.56
MSS116YDR194C GWT1P47026 490 aa5.33□□□□□ -1.56
MSS116YDR194C AZR1P50080 613 aa5.33□□□□□ -1.56
MSS116YDR194C OKP1P53298 406 aa5.33□□□□□ -1.56
MSS116YDR194C TDA7P53882 636 aaPredicted RBP5.33□□□□□ -1.56
MSS116YDR194C IDP3P53982 420 aaKnown RBP5.33□□□□□ -1.56
MSS116YDR194C HER2Q03557 464 aa5.33□□□□□ -1.56
MSS116YDR194C YLR283WQ05867 314 aa5.33□□□□□ -1.56
MSS116YDR194C VPS74Q06385 345 aa5.33□□□□□ -1.56
MSS116YDR194C GAT3Q07928 141 aa5.33□□□□□ -1.56
MSS116YDR194C TIM18Q08749 192 aa5.33□□□□□ -1.56
MSS116YDR194C RAX1Q08760 435 aa5.33□□□□□ -1.56
MSS116YDR194C TPT1Q12272 230 aaKnown RBP5.33□□□□□ -1.56
MSS116YDR194C TDH2P00358 332 aaKnown RBP5.32□□□□□ -1.56
MSS116YDR194C PAB1P04147 577 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
MSS116YDR194C GPX2P38143 162 aa5.32□□□□□ -1.56
MSS116YDR194C AIM24P47127 394 aa5.32□□□□□ -1.56
MSS116YDR194C ECI1Q05871 280 aa5.32□□□□□ -1.56
MSS116YDR194C CMS1Q07897 291 aaKnown RBP5.32□□□□□ -1.56
MSS116YDR194C IRC10Q08118 586 aa5.32□□□□□ -1.56
MSS116YDR194C DET1Q99288 334 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms